RNA–Protein interactions for RNA: ENST00000454592.5

PHTF2-209, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best)

Gene PHTF2, Length 1,563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-209ENST00000454592 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
PHTF2-209ENST00000454592 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
PHTF2-209ENST00000454592 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
PHTF2-209ENST00000454592 NISCHQ9Y2I1 1504 aa17.4■□□□□ 0.38
PHTF2-209ENST00000454592 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
PHTF2-209ENST00000454592 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
PHTF2-209ENST00000454592 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
PHTF2-209ENST00000454592 FOXD1Q16676 465 aa16.05■□□□□ 0.16
PHTF2-209ENST00000454592 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
PHTF2-209ENST00000454592 MSH5O43196 834 aa15.43■□□□□ 0.06
PHTF2-209ENST00000454592 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
PHTF2-209ENST00000454592 ADRA2BP18089 450 aa15.37■□□□□ 0.05
PHTF2-209ENST00000454592 ABCC9O60706 1549 aa15.07■□□□□ 0
PHTF2-209ENST00000454592 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
PHTF2-209ENST00000454592 NACADO15069 1562 aa14.54□□□□□ -0.08
PHTF2-209ENST00000454592 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.08
PHTF2-209ENST00000454592 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.09
PHTF2-209ENST00000454592 ZCCHC6Q5VYS8 1495 aaKnown RBP14.51□□□□□ -0.09
PHTF2-209ENST00000454592 DCAF1Q9Y4B6 1507 aa14.44□□□□□ -0.1
PHTF2-209ENST00000454592 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
PHTF2-209ENST00000454592 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
PHTF2-209ENST00000454592 UNC13AQ9UPW8 1703 aa14.13□□□□□ -0.15
PHTF2-209ENST00000454592 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
PHTF2-209ENST00000454592 KCNA4P22459 653 aa14.09□□□□□ -0.15
PHTF2-209ENST00000454592 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
PHTF2-209ENST00000454592 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
PHTF2-209ENST00000454592 SHROOM4Q9ULL8 1493 aa14.01□□□□□ -0.17
PHTF2-209ENST00000454592 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
PHTF2-209ENST00000454592 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
PHTF2-209ENST00000454592 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
PHTF2-209ENST00000454592 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
PHTF2-209ENST00000454592 CNKSR2Q8WXI2 1034 aa13.77□□□□□ -0.21
PHTF2-209ENST00000454592 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
PHTF2-209ENST00000454592 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
PHTF2-209ENST00000454592 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.22
PHTF2-209ENST00000454592 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
PHTF2-209ENST00000454592 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
PHTF2-209ENST00000454592 CECR2Q9BXF3 1484 aa13.56□□□□□ -0.24
PHTF2-209ENST00000454592 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
PHTF2-209ENST00000454592 SMARCA4P51532 1647 aa13.47□□□□□ -0.25
PHTF2-209ENST00000454592 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
PHTF2-209ENST00000454592 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
PHTF2-209ENST00000454592 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
PHTF2-209ENST00000454592 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
PHTF2-209ENST00000454592 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
PHTF2-209ENST00000454592 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
PHTF2-209ENST00000454592 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
PHTF2-209ENST00000454592 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
PHTF2-209ENST00000454592 HMGXB3Q12766 1538 aa13.36□□□□□ -0.27
PHTF2-209ENST00000454592 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
PHTF2-209ENST00000454592 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
PHTF2-209ENST00000454592 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
PHTF2-209ENST00000454592 WIZO95785 1651 aa13.21□□□□□ -0.3
PHTF2-209ENST00000454592 TOP2AP11388 1531 aaKnown RBP13.12□□□□□ -0.31
PHTF2-209ENST00000454592 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
PHTF2-209ENST00000454592 NESP48681 1621 aa13.05□□□□□ -0.32
PHTF2-209ENST00000454592 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
PHTF2-209ENST00000454592 CADPSQ9ULU8 1353 aa13.04□□□□□ -0.32
PHTF2-209ENST00000454592 RNF39Q9H2S5 420 aa13.02□□□□□ -0.33
PHTF2-209ENST00000454592 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
PHTF2-209ENST00000454592 ZBTB22O15209 634 aa12.99□□□□□ -0.33
PHTF2-209ENST00000454592 ERCC6Q03468 1493 aa12.98□□□□□ -0.33
PHTF2-209ENST00000454592 CFTRP13569 1480 aa12.97□□□□□ -0.33
PHTF2-209ENST00000454592 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
PHTF2-209ENST00000454592 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.33
PHTF2-209ENST00000454592 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
PHTF2-209ENST00000454592 CUX2O14529 1486 aa12.9□□□□□ -0.34
PHTF2-209ENST00000454592 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
PHTF2-209ENST00000454592 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
PHTF2-209ENST00000454592 SUPT5HO00267 1087 aaKnown RBP12.86□□□□□ -0.35
PHTF2-209ENST00000454592 FANCD2Q9BXW9 1451 aa12.86□□□□□ -0.35
PHTF2-209ENST00000454592 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
PHTF2-209ENST00000454592 KIF21AQ7Z4S6 1674 aa12.85□□□□□ -0.35
PHTF2-209ENST00000454592 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.35
PHTF2-209ENST00000454592 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
PHTF2-209ENST00000454592 WDR62O43379 1518 aa12.79□□□□□ -0.36
PHTF2-209ENST00000454592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.363e-8■■■■□ 20.1
PHTF2-209ENST00000454592 PRDM2Q13029 1718 aa12.77□□□□□ -0.37
PHTF2-209ENST00000454592 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
PHTF2-209ENST00000454592 ABCC8Q09428 1581 aa12.67□□□□□ -0.38
PHTF2-209ENST00000454592 TOPBP1Q92547 1522 aa12.66□□□□□ -0.38
PHTF2-209ENST00000454592 POTEHQ6S545 545 aa12.65□□□□□ -0.38
PHTF2-209ENST00000454592 DNMBPQ6XZF7 1577 aa12.63□□□□□ -0.39
PHTF2-209ENST00000454592 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
PHTF2-209ENST00000454592 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
PHTF2-209ENST00000454592 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
PHTF2-209ENST00000454592 CUX1P39880 1505 aa12.56□□□□□ -0.4
PHTF2-209ENST00000454592 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
PHTF2-209ENST00000454592 FGD5Q6ZNL6 1462 aa12.51□□□□□ -0.41
PHTF2-209ENST00000454592 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
PHTF2-209ENST00000454592 SOGA1O94964 1423 aa12.5□□□□□ -0.41
PHTF2-209ENST00000454592 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
PHTF2-209ENST00000454592 WRNQ14191 1432 aaPredicted RBP eCLIP12.49□□□□□ -0.41
PHTF2-209ENST00000454592 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
PHTF2-209ENST00000454592 RAD54L2Q9Y4B4 1467 aa12.48□□□□□ -0.41
PHTF2-209ENST00000454592 TOP2BQ02880 1626 aa12.46□□□□□ -0.42
PHTF2-209ENST00000454592 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
PHTF2-209ENST00000454592 AQRO60306 1485 aaKnown RBP eCLIP12.44□□□□□ -0.423e-7■■■■■ 36.6
PHTF2-209ENST00000454592 BIVM-ERCC5R4GMW8 1640 aa12.44□□□□□ -0.42
PHTF2-209ENST00000454592 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms