RNA–Protein interactions for RNA: ENST00000453985.6

ABCA9-202, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5 BASIC

Gene ABCA9, Length 6,116 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-202ENST00000453985 DCAF8L2P0C7V8 631 aa14.62□□□□□ -0.07
ABCA9-202ENST00000453985 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
ABCA9-202ENST00000453985 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
ABCA9-202ENST00000453985 SUPT5HO00267 1087 aaKnown RBP13.81□□□□□ -0.2
ABCA9-202ENST00000453985 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
ABCA9-202ENST00000453985 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
ABCA9-202ENST00000453985 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
ABCA9-202ENST00000453985 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
ABCA9-202ENST00000453985 APLP2Q06481 763 aa13.51□□□□□ -0.25
ABCA9-202ENST00000453985 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
ABCA9-202ENST00000453985 MYT1Q01538 1121 aa13.33□□□□□ -0.28
ABCA9-202ENST00000453985 TTBK1Q5TCY1 1321 aaPredicted RBP13.3□□□□□ -0.28
ABCA9-202ENST00000453985 CENPBP07199 599 aaPredicted RBP13.23□□□□□ -0.29
ABCA9-202ENST00000453985 NEFLP07196 543 aa13.15□□□□□ -0.3
ABCA9-202ENST00000453985 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
ABCA9-202ENST00000453985 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
ABCA9-202ENST00000453985 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
ABCA9-202ENST00000453985 ATP1B4Q9UN42 357 aaPredicted RBP13.06□□□□□ -0.32
ABCA9-202ENST00000453985 YTHDC1Q96MU7 727 aaKnown RBP12.99□□□□□ -0.33
ABCA9-202ENST00000453985 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
ABCA9-202ENST00000453985 ZEB1P37275 1124 aaPredicted RBP12.79□□□□□ -0.36
ABCA9-202ENST00000453985 POLR3GLQ9BT43 218 aa12.78□□□□□ -0.36
ABCA9-202ENST00000453985 MYT1LQ9UL68 1186 aa12.75□□□□□ -0.37
ABCA9-202ENST00000453985 CNGB1Q14028 1251 aaPredicted RBP12.69□□□□□ -0.38
ABCA9-202ENST00000453985 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
ABCA9-202ENST00000453985 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
ABCA9-202ENST00000453985 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
ABCA9-202ENST00000453985 UBTFP17480 764 aaKnown RBP12.63□□□□□ -0.39
ABCA9-202ENST00000453985 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
ABCA9-202ENST00000453985 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
ABCA9-202ENST00000453985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
ABCA9-202ENST00000453985 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
ABCA9-202ENST00000453985 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
ABCA9-202ENST00000453985 ITGAEP38570 1179 aa12.46□□□□□ -0.41
ABCA9-202ENST00000453985 ABCC9O60706 1549 aa12.46□□□□□ -0.42
ABCA9-202ENST00000453985 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
ABCA9-202ENST00000453985 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
ABCA9-202ENST00000453985 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
ABCA9-202ENST00000453985 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
ABCA9-202ENST00000453985 LOC105371045A0A1W2PR82 267 aa12.28□□□□□ -0.44
ABCA9-202ENST00000453985 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
ABCA9-202ENST00000453985 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
ABCA9-202ENST00000453985 HRCP23327 699 aa12.18□□□□□ -0.46
ABCA9-202ENST00000453985 BCANQ96GW7 911 aa12.18□□□□□ -0.46
ABCA9-202ENST00000453985 CANXP27824 592 aaKnown RBP12.15□□□□□ -0.47
ABCA9-202ENST00000453985 CDK11AQ9UQ88 783 aaPredicted RBP12.11□□□□□ -0.47
ABCA9-202ENST00000453985 ANP32BQ92688 251 aaKnown RBP12.09□□□□□ -0.47
ABCA9-202ENST00000453985 NEFMP07197 916 aa12.06□□□□□ -0.48
ABCA9-202ENST00000453985 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
ABCA9-202ENST00000453985 ZNF326Q5BKZ1 582 aaKnown RBP12.03□□□□□ -0.48
ABCA9-202ENST00000453985 HSP90AA1P07900 732 aaKnown RBP12□□□□□ -0.49
ABCA9-202ENST00000453985 DIEXFQ68CQ4 756 aaKnown RBP12□□□□□ -0.49
ABCA9-202ENST00000453985 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
ABCA9-202ENST00000453985 GLIPR1L2Q4G1C9 344 aa11.99□□□□□ -0.49
ABCA9-202ENST00000453985 CDK11BP21127 795 aaKnown RBP11.98□□□□□ -0.49
ABCA9-202ENST00000453985 NEUROD1Q13562 356 aa11.98□□□□□ -0.49
ABCA9-202ENST00000453985 ANP32AP39687 249 aaKnown RBP11.97□□□□□ -0.49
ABCA9-202ENST00000453985 FAM50AQ14320 339 aaKnown RBP11.97□□□□□ -0.49
ABCA9-202ENST00000453985 ZCCHC6Q5VYS8 1495 aaKnown RBP11.95□□□□□ -0.5
ABCA9-202ENST00000453985 ANP32CO43423 234 aa11.93□□□□□ -0.5
ABCA9-202ENST00000453985 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
ABCA9-202ENST00000453985 CCDC180Q9P1Z9 1646 aa11.87□□□□□ -0.51
ABCA9-202ENST00000453985 GTF3C3Q9Y5Q9 886 aa11.87□□□□□ -0.51
ABCA9-202ENST00000453985 FBLN2P98095 1184 aa11.87□□□□□ -0.51
ABCA9-202ENST00000453985 ARXQ96QS3 562 aa11.86□□□□□ -0.51
ABCA9-202ENST00000453985 CSRNP3Q8WYN3 585 aa11.84□□□□□ -0.51
ABCA9-202ENST00000453985 UPF2Q9HAU5 1272 aaKnown RBP11.82□□□□□ -0.52
ABCA9-202ENST00000453985 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
ABCA9-202ENST00000453985 PLPPR3Q6T4P5 718 aa11.75□□□□□ -0.53
ABCA9-202ENST00000453985 A0A0G2JS52 829 aa11.74□□□□□ -0.53
ABCA9-202ENST00000453985 TULP1O00294 542 aaPredicted RBP11.74□□□□□ -0.53
ABCA9-202ENST00000453985 ESF1Q9H501 851 aaKnown RBP11.7□□□□□ -0.54
ABCA9-202ENST00000453985 NBR1Q14596 966 aa11.7□□□□□ -0.54
ABCA9-202ENST00000453985 ARID3CA6NKF2 412 aa11.68□□□□□ -0.54
ABCA9-202ENST00000453985 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
ABCA9-202ENST00000453985 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
ABCA9-202ENST00000453985 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
ABCA9-202ENST00000453985 TNNT2P45379 298 aaPredicted RBP11.65□□□□□ -0.54
ABCA9-202ENST00000453985 NCBP3Q53F19 620 aaKnown RBP11.64□□□□□ -0.55
ABCA9-202ENST00000453985 SALL2Q9Y467 1007 aaPredicted RBP11.64□□□□□ -0.55
ABCA9-202ENST00000453985 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
ABCA9-202ENST00000453985 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.61□□□□□ -0.55
ABCA9-202ENST00000453985 FKBP8Q14318 412 aa11.6□□□□□ -0.55
ABCA9-202ENST00000453985 NCLP19338 710 aaKnown RBP11.59□□□□□ -0.55
ABCA9-202ENST00000453985 TRIM44Q96DX7 344 aaPredicted RBP11.59□□□□□ -0.55
ABCA9-202ENST00000453985 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
ABCA9-202ENST00000453985 NACADO15069 1562 aa11.58□□□□□ -0.56
ABCA9-202ENST00000453985 ZRSR1Q15695 479 aaKnown RBP11.57□□□□□ -0.56
ABCA9-202ENST00000453985 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
ABCA9-202ENST00000453985 TPRNQ4KMQ1 711 aa11.55□□□□□ -0.56
ABCA9-202ENST00000453985 RSF1Q96T23 1441 aaPredicted RBP11.55□□□□□ -0.56
ABCA9-202ENST00000453985 DNTTIP2Q5QJE6 756 aaKnown RBP11.54□□□□□ -0.56
ABCA9-202ENST00000453985 MYH16Q9H6N6 1097 aa11.54□□□□□ -0.56
ABCA9-202ENST00000453985 PTMAP06454 111 aaKnown RBP11.54□□□□□ -0.56
ABCA9-202ENST00000453985 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
ABCA9-202ENST00000453985 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
ABCA9-202ENST00000453985 ZBTB7CA1YPR0 619 aa11.53□□□□□ -0.56
ABCA9-202ENST00000453985 HNRNPUQ00839 825 aaKnown RBP eCLIP11.52□□□□□ -0.57
ABCA9-202ENST00000453985 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
ABCA9-202ENST00000453985 AMER1Q5JTC6 1135 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms