RNA–Protein interactions for RNA: ENST00000453835.1

CR559946.1-201, humanhuman

TSL 4 BASIC

Gene CR559946.1, Length 531 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR559946.1-201ENST00000453835 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
CR559946.1-201ENST00000453835 ABCC9O60706 1549 aa38.55■■■■□ 3.76
CR559946.1-201ENST00000453835 CCDC180Q9P1Z9 1646 aa38.31■■■■□ 3.72
CR559946.1-201ENST00000453835 RB1CC1Q8TDY2 1594 aa36.55■■■■□ 3.44
CR559946.1-201ENST00000453835 DNAJC5BQ9UF47 199 aa36.36■■■■□ 3.41
CR559946.1-201ENST00000453835 NACADO15069 1562 aa36.27■■■■□ 3.4
CR559946.1-201ENST00000453835 DCAF8L2P0C7V8 631 aa36.16■■■■□ 3.38
CR559946.1-201ENST00000453835 PABPN1Q86U42 306 aaKnown RBP eCLIP35.92■■■■□ 3.34
CR559946.1-201ENST00000453835 UNC13AQ9UPW8 1703 aa35.77■■■■□ 3.32
CR559946.1-201ENST00000453835 MYO15BQ96JP2 1530 aa35.71■■■■□ 3.31
CR559946.1-201ENST00000453835 BICRAQ9NZM4 1560 aa35.57■■■■□ 3.28
CR559946.1-201ENST00000453835 ZCCHC6Q5VYS8 1495 aaKnown RBP35.37■■■■□ 3.25
CR559946.1-201ENST00000453835 DCAF1Q9Y4B6 1507 aa35.22■■■■□ 3.23
CR559946.1-201ENST00000453835 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
CR559946.1-201ENST00000453835 SHROOM4Q9ULL8 1493 aa34.95■■■■□ 3.19
CR559946.1-201ENST00000453835 CC2D2AQ9P2K1 1620 aa34.79■■■■□ 3.16
CR559946.1-201ENST00000453835 CECR2Q9BXF3 1484 aa34.71■■■■□ 3.15
CR559946.1-201ENST00000453835 EIF4G1Q04637 1599 aaKnown RBP34.68■■■■□ 3.14
CR559946.1-201ENST00000453835 NCAPD3P42695 1498 aa33.52■■■□□ 2.96
CR559946.1-201ENST00000453835 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
CR559946.1-201ENST00000453835 DNAJC5Q9H3Z4 198 aa33.39■■■□□ 2.94
CR559946.1-201ENST00000453835 SMARCA4P51532 1647 aa33.34■■■□□ 2.93
CR559946.1-201ENST00000453835 SMARCA2P51531 1590 aa33.26■■■□□ 2.92
CR559946.1-201ENST00000453835 ERCC6Q03468 1493 aa33.24■■■□□ 2.91
CR559946.1-201ENST00000453835 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
CR559946.1-201ENST00000453835 CUX2O14529 1486 aa33.19■■■□□ 2.9
CR559946.1-201ENST00000453835 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
CR559946.1-201ENST00000453835 NESP48681 1621 aa33.11■■■□□ 2.89
CR559946.1-201ENST00000453835 BAZ1BQ9UIG0 1483 aaKnown RBP33.07■■■□□ 2.88
CR559946.1-201ENST00000453835 PEG3Q9GZU2 1588 aa33■■■□□ 2.87
CR559946.1-201ENST00000453835 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
CR559946.1-201ENST00000453835 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
CR559946.1-201ENST00000453835 THOC2Q8NI27 1593 aaKnown RBP32.74■■■□□ 2.83
CR559946.1-201ENST00000453835 KIF21AQ7Z4S6 1674 aa32.62■■■□□ 2.81
CR559946.1-201ENST00000453835 PDS5BQ9NTI5 1447 aa32.58■■■□□ 2.81
CR559946.1-201ENST00000453835 WIZO95785 1651 aa32.54■■■□□ 2.8
CR559946.1-201ENST00000453835 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.79
CR559946.1-201ENST00000453835 MRC2Q9UBG0 1479 aa32.33■■■□□ 2.77
CR559946.1-201ENST00000453835 WDR62O43379 1518 aa32.25■■■□□ 2.75
CR559946.1-201ENST00000453835 RSF1Q96T23 1441 aaPredicted RBP32.22■■■□□ 2.75
CR559946.1-201ENST00000453835 CEP164Q9UPV0 1460 aa32.16■■■□□ 2.74
CR559946.1-201ENST00000453835 FANCD2Q9BXW9 1451 aa32.15■■■□□ 2.74
CR559946.1-201ENST00000453835 CFTRP13569 1480 aa32.1■■■□□ 2.73
CR559946.1-201ENST00000453835 TOP2AP11388 1531 aaKnown RBP32.08■■■□□ 2.73
CR559946.1-201ENST00000453835 URB2Q14146 1524 aaKnown RBP31.92■■■□□ 2.7
CR559946.1-201ENST00000453835 TRIM41Q8WV44 630 aa31.91■■■□□ 2.7
CR559946.1-201ENST00000453835 CCDC88BA6NC98 1476 aa31.77■■■□□ 2.68
CR559946.1-201ENST00000453835 PRDM2Q13029 1718 aa31.71■■■□□ 2.67
CR559946.1-201ENST00000453835 OSCARQ8IYS5 282 aa31.7■■■□□ 2.67
CR559946.1-201ENST00000453835 ZNF608Q9ULD9 1512 aaPredicted RBP31.56■■■□□ 2.64
CR559946.1-201ENST00000453835 TOPBP1Q92547 1522 aa31.53■■■□□ 2.64
CR559946.1-201ENST00000453835 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
CR559946.1-201ENST00000453835 ABCC8Q09428 1581 aa31.37■■■□□ 2.61
CR559946.1-201ENST00000453835 DNMBPQ6XZF7 1577 aa31.37■■■□□ 2.61
CR559946.1-201ENST00000453835 EIF4G3O43432 1585 aaKnown RBP31.33■■■□□ 2.61
CR559946.1-201ENST00000453835 RIMBP3CA6NJZ7 1639 aa31.31■■■□□ 2.6
CR559946.1-201ENST00000453835 RIMBP3BA6NNM3 1639 aa31.31■■■□□ 2.6
CR559946.1-201ENST00000453835 RIMBP3Q9UFD9 1639 aa31.31■■■□□ 2.6
CR559946.1-201ENST00000453835 TARBP1Q13395 1621 aaKnown RBP31.26■■■□□ 2.59
CR559946.1-201ENST00000453835 AQRO60306 1485 aaKnown RBP eCLIP31.26■■■□□ 2.59
CR559946.1-201ENST00000453835 ARHGEF11O15085 1522 aa31.2■■■□□ 2.59
CR559946.1-201ENST00000453835 POLA1P09884 1462 aaPredicted RBP31.2■■■□□ 2.58
CR559946.1-201ENST00000453835 RAD54L2Q9Y4B4 1467 aa31.13■■■□□ 2.57
CR559946.1-201ENST00000453835 CHD1O14646 1710 aa31.12■■■□□ 2.57
CR559946.1-201ENST00000453835 FBLN2P98095 1184 aa31.06■■■□□ 2.56
CR559946.1-201ENST00000453835 SOGA1O94964 1423 aa31.06■■■□□ 2.56
CR559946.1-201ENST00000453835 TDRD9Q8NDG6 1382 aaKnown RBP31.05■■■□□ 2.56
CR559946.1-201ENST00000453835 CYB5RLQ6IPT4 315 aa31.01■■■□□ 2.55
CR559946.1-201ENST00000453835 FGD5Q6ZNL6 1462 aa30.99■■■□□ 2.55
CR559946.1-201ENST00000453835 CUX1P39880 1505 aa30.96■■■□□ 2.55
CR559946.1-201ENST00000453835 SNAPC4Q5SXM2 1469 aa30.9■■■□□ 2.54
CR559946.1-201ENST00000453835 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
CR559946.1-201ENST00000453835 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
CR559946.1-201ENST00000453835 CHMP7Q8WUX9 453 aaPredicted RBP30.79■■■□□ 2.52
CR559946.1-201ENST00000453835 GRIN2BQ13224 1484 aa30.77■■■□□ 2.52
CR559946.1-201ENST00000453835 CLASP1Q7Z460 1538 aa30.77■■■□□ 2.52
CR559946.1-201ENST00000453835 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.52
CR559946.1-201ENST00000453835 SUPT5HO00267 1087 aaKnown RBP30.73■■■□□ 2.51
CR559946.1-201ENST00000453835 TRHP20396 242 aaPredicted RBP30.69■■■□□ 2.5
CR559946.1-201ENST00000453835 SYNJ1O43426 1573 aa30.69■■■□□ 2.5
CR559946.1-201ENST00000453835 SYNJ2O15056 1496 aa30.69■■■□□ 2.5
CR559946.1-201ENST00000453835 GAPVD1Q14C86 1478 aa30.66■■■□□ 2.5
CR559946.1-201ENST00000453835 PBRM1Q86U86 1689 aa30.64■■■□□ 2.5
CR559946.1-201ENST00000453835 ABCA10Q8WWZ4 1543 aa30.61■■■□□ 2.49
CR559946.1-201ENST00000453835 ABCA5Q8WWZ7 1642 aa30.58■■■□□ 2.49
CR559946.1-201ENST00000453835 WRNQ14191 1432 aaPredicted RBP eCLIP30.45■■■□□ 2.46
CR559946.1-201ENST00000453835 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
CR559946.1-201ENST00000453835 TOP2BQ02880 1626 aa30.39■■■□□ 2.46
CR559946.1-201ENST00000453835 BIVM-ERCC5R4GMW8 1640 aa30.38■■■□□ 2.45
CR559946.1-201ENST00000453835 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
CR559946.1-201ENST00000453835 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
CR559946.1-201ENST00000453835 CEP170Q5SW79 1584 aa30.32■■■□□ 2.44
CR559946.1-201ENST00000453835 NUP160Q12769 1436 aa30.3■■■□□ 2.44
CR559946.1-201ENST00000453835 FHAD1B1AJZ9 1412 aa30.26■■■□□ 2.43
CR559946.1-201ENST00000453835 ERICH3Q5RHP9 1530 aa30.2■■■□□ 2.42
CR559946.1-201ENST00000453835 SHROOM2Q13796 1616 aa30.16■■■□□ 2.42
CR559946.1-201ENST00000453835 PRG4Q92954 1404 aaPredicted RBP30.04■■■□□ 2.4
CR559946.1-201ENST00000453835 JPH4Q96JJ6 628 aa30■■■□□ 2.39
CR559946.1-201ENST00000453835 RUSC2Q8N2Y8 1516 aa29.93■■■□□ 2.38
CR559946.1-201ENST00000453835 IGF1RP08069 1367 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms