RNA–Protein interactions for RNA: ENST00000453396.5

SMIM27-204, Transcript of small integral membrane protein 27, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SMIM27, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-204ENST00000453396 NISCHQ9Y2I1 1504 aa42.51■■■■■ 4.4
SMIM27-204ENST00000453396 CCDC180Q9P1Z9 1646 aa38.06■■■■□ 3.68
SMIM27-204ENST00000453396 ABCC9O60706 1549 aa37.99■■■■□ 3.67
SMIM27-204ENST00000453396 RB1CC1Q8TDY2 1594 aa36.19■■■■□ 3.38
SMIM27-204ENST00000453396 NACADO15069 1562 aa35.96■■■■□ 3.35
SMIM27-204ENST00000453396 DCAF8L2P0C7V8 631 aa35.91■■■■□ 3.34
SMIM27-204ENST00000453396 DNAJC5BQ9UF47 199 aa35.54■■■■□ 3.28
SMIM27-204ENST00000453396 MYO15BQ96JP2 1530 aa35.48■■■■□ 3.27
SMIM27-204ENST00000453396 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
SMIM27-204ENST00000453396 UNC13AQ9UPW8 1703 aa35.4■■■■□ 3.26
SMIM27-204ENST00000453396 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
SMIM27-204ENST00000453396 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.21
SMIM27-204ENST00000453396 DCAF1Q9Y4B6 1507 aa35.09■■■■□ 3.21
SMIM27-204ENST00000453396 SCRIBQ14160 1630 aa34.74■■■■□ 3.15
SMIM27-204ENST00000453396 SHROOM4Q9ULL8 1493 aa34.62■■■■□ 3.13
SMIM27-204ENST00000453396 CC2D2AQ9P2K1 1620 aa34.31■■■■□ 3.08
SMIM27-204ENST00000453396 EIF4G1Q04637 1599 aaKnown RBP34.27■■■■□ 3.08
SMIM27-204ENST00000453396 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.06
SMIM27-204ENST00000453396 NCAPD3P42695 1498 aa33.2■■■□□ 2.91
SMIM27-204ENST00000453396 ATAD2BQ9ULI0 1458 aa33.14■■■□□ 2.9
SMIM27-204ENST00000453396 SMARCA4P51532 1647 aa33.13■■■□□ 2.89
SMIM27-204ENST00000453396 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
SMIM27-204ENST00000453396 BAZ1AQ9NRL2 1556 aaPredicted RBP32.99■■■□□ 2.87
SMIM27-204ENST00000453396 HMGXB3Q12766 1538 aa32.96■■■□□ 2.87
SMIM27-204ENST00000453396 BAZ1BQ9UIG0 1483 aaKnown RBP32.83■■■□□ 2.85
SMIM27-204ENST00000453396 ERCC6Q03468 1493 aa32.79■■■□□ 2.84
SMIM27-204ENST00000453396 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
SMIM27-204ENST00000453396 MROH2BQ7Z745 1585 aa32.78■■■□□ 2.84
SMIM27-204ENST00000453396 NESP48681 1621 aa32.68■■■□□ 2.82
SMIM27-204ENST00000453396 CUX2O14529 1486 aa32.64■■■□□ 2.82
SMIM27-204ENST00000453396 DNAJC5Q9H3Z4 198 aa32.5■■■□□ 2.79
SMIM27-204ENST00000453396 LAMC3Q9Y6N6 1575 aa32.43■■■□□ 2.78
SMIM27-204ENST00000453396 WIZO95785 1651 aa32.4■■■□□ 2.78
SMIM27-204ENST00000453396 THOC2Q8NI27 1593 aaKnown RBP32.29■■■□□ 2.76
SMIM27-204ENST00000453396 KIF21AQ7Z4S6 1674 aa32.26■■■□□ 2.75
SMIM27-204ENST00000453396 PDS5BQ9NTI5 1447 aa32.25■■■□□ 2.75
SMIM27-204ENST00000453396 CADPSQ9ULU8 1353 aa32.22■■■□□ 2.75
SMIM27-204ENST00000453396 RSF1Q96T23 1441 aaPredicted RBP32.14■■■□□ 2.74
SMIM27-204ENST00000453396 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
SMIM27-204ENST00000453396 MRC2Q9UBG0 1479 aa31.97■■■□□ 2.71
SMIM27-204ENST00000453396 WDR62O43379 1518 aa31.88■■■□□ 2.69
SMIM27-204ENST00000453396 CFTRP13569 1480 aa31.87■■■□□ 2.69
SMIM27-204ENST00000453396 CEP164Q9UPV0 1460 aa31.87■■■□□ 2.69
SMIM27-204ENST00000453396 FANCD2Q9BXW9 1451 aa31.85■■■□□ 2.69
SMIM27-204ENST00000453396 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
SMIM27-204ENST00000453396 URB2Q14146 1524 aaKnown RBP31.59■■■□□ 2.65
SMIM27-204ENST00000453396 PRDM2Q13029 1718 aa31.56■■■□□ 2.64
SMIM27-204ENST00000453396 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
SMIM27-204ENST00000453396 IFT140Q96RY7 1462 aa31.22■■■□□ 2.59
SMIM27-204ENST00000453396 OSCARQ8IYS5 282 aa31.22■■■□□ 2.59
SMIM27-204ENST00000453396 ZNF608Q9ULD9 1512 aaPredicted RBP31.19■■■□□ 2.58
SMIM27-204ENST00000453396 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
SMIM27-204ENST00000453396 TRIM41Q8WV44 630 aa31.18■■■□□ 2.58
SMIM27-204ENST00000453396 DNMBPQ6XZF7 1577 aa31.15■■■□□ 2.58
SMIM27-204ENST00000453396 EIF4G3O43432 1585 aaKnown RBP31■■■□□ 2.55
SMIM27-204ENST00000453396 TARBP1Q13395 1621 aaKnown RBP30.97■■■□□ 2.55
SMIM27-204ENST00000453396 POLA1P09884 1462 aaPredicted RBP30.95■■■□□ 2.55
SMIM27-204ENST00000453396 AQRO60306 1485 aaKnown RBP eCLIP30.93■■■□□ 2.54
SMIM27-204ENST00000453396 SUPT5HO00267 1087 aaKnown RBP30.88■■■□□ 2.53
SMIM27-204ENST00000453396 RAD54L2Q9Y4B4 1467 aa30.87■■■□□ 2.53
SMIM27-204ENST00000453396 SOGA1O94964 1423 aa30.82■■■□□ 2.52
SMIM27-204ENST00000453396 FGD5Q6ZNL6 1462 aa30.79■■■□□ 2.52
SMIM27-204ENST00000453396 RIMBP3CA6NJZ7 1639 aa30.79■■■□□ 2.52
SMIM27-204ENST00000453396 RIMBP3BA6NNM3 1639 aa30.79■■■□□ 2.52
SMIM27-204ENST00000453396 RIMBP3Q9UFD9 1639 aa30.79■■■□□ 2.52
SMIM27-204ENST00000453396 CUX1P39880 1505 aa30.78■■■□□ 2.52
SMIM27-204ENST00000453396 CHD1O14646 1710 aa30.77■■■□□ 2.52
SMIM27-204ENST00000453396 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
SMIM27-204ENST00000453396 FBLN2P98095 1184 aa30.73■■■□□ 2.51
SMIM27-204ENST00000453396 ARHGEF11O15085 1522 aa30.7■■■□□ 2.51
SMIM27-204ENST00000453396 WDR97A6NE52 1622 aa30.63■■■□□ 2.49
SMIM27-204ENST00000453396 SNAPC4Q5SXM2 1469 aa30.61■■■□□ 2.49
SMIM27-204ENST00000453396 GRIN2BQ13224 1484 aa30.52■■■□□ 2.48
SMIM27-204ENST00000453396 CYB5RLQ6IPT4 315 aa30.51■■■□□ 2.47
SMIM27-204ENST00000453396 MAGI1Q96QZ7 1491 aaPredicted RBP30.5■■■□□ 2.47
SMIM27-204ENST00000453396 CHMP7Q8WUX9 453 aaPredicted RBP30.5■■■□□ 2.47
SMIM27-204ENST00000453396 GAPVD1Q14C86 1478 aa30.45■■■□□ 2.47
SMIM27-204ENST00000453396 ABCA10Q8WWZ4 1543 aa30.43■■■□□ 2.46
SMIM27-204ENST00000453396 PBRM1Q86U86 1689 aa30.43■■■□□ 2.46
SMIM27-204ENST00000453396 SYNJ2O15056 1496 aa30.41■■■□□ 2.46
SMIM27-204ENST00000453396 ARAP1Q96P48 1450 aa30.41■■■□□ 2.46
SMIM27-204ENST00000453396 SYNJ1O43426 1573 aa30.39■■■□□ 2.46
SMIM27-204ENST00000453396 CLASP1Q7Z460 1538 aa30.38■■■□□ 2.45
SMIM27-204ENST00000453396 ABCA5Q8WWZ7 1642 aa30.37■■■□□ 2.45
SMIM27-204ENST00000453396 WRNQ14191 1432 aaPredicted RBP eCLIP30.34■■■□□ 2.45
SMIM27-204ENST00000453396 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
SMIM27-204ENST00000453396 BIVM-ERCC5R4GMW8 1640 aa30.31■■■□□ 2.44
SMIM27-204ENST00000453396 GRIN2AQ12879 1464 aa30.14■■■□□ 2.42
SMIM27-204ENST00000453396 ADAMTS12P58397 1594 aa30.14■■■□□ 2.42
SMIM27-204ENST00000453396 TRHP20396 242 aaPredicted RBP30.13■■■□□ 2.41
SMIM27-204ENST00000453396 FHAD1B1AJZ9 1412 aa30.06■■■□□ 2.4
SMIM27-204ENST00000453396 ERICH3Q5RHP9 1530 aa30.04■■■□□ 2.4
SMIM27-204ENST00000453396 CEP170Q5SW79 1584 aa30.03■■■□□ 2.4
SMIM27-204ENST00000453396 NUP160Q12769 1436 aa30.03■■■□□ 2.4
SMIM27-204ENST00000453396 ERCC6L2Q5T890 1561 aa29.96■■■□□ 2.39
SMIM27-204ENST00000453396 SHROOM2Q13796 1616 aa29.87■■■□□ 2.37
SMIM27-204ENST00000453396 PRG4Q92954 1404 aaPredicted RBP29.75■■■□□ 2.35
SMIM27-204ENST00000453396 JPH4Q96JJ6 628 aa29.75■■■□□ 2.35
SMIM27-204ENST00000453396 KIF27Q86VH2 1401 aa29.74■■■□□ 2.35
SMIM27-204ENST00000453396 IGF1RP08069 1367 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms