RNA–Protein interactions for RNA: ENST00000452980.5

UBXN11-212, Transcript of UBX domain protein 11, humanhuman

TSL 3

Gene UBXN11, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-212ENST00000452980 NISCHQ9Y2I1 1504 aa31.05■■■□□ 2.56
UBXN11-212ENST00000452980 ABCC9O60706 1549 aa28.46■■■□□ 2.15
UBXN11-212ENST00000452980 CCDC180Q9P1Z9 1646 aa28.16■■■□□ 2.1
UBXN11-212ENST00000452980 RB1CC1Q8TDY2 1594 aa27■■□□□ 1.91
UBXN11-212ENST00000452980 DNAJC5BQ9UF47 199 aa26.94■■□□□ 1.9
UBXN11-212ENST00000452980 NACADO15069 1562 aa26.7■■□□□ 1.86
UBXN11-212ENST00000452980 DCAF8L2P0C7V8 631 aa26.39■■□□□ 1.82
UBXN11-212ENST00000452980 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
UBXN11-212ENST00000452980 UNC13AQ9UPW8 1703 aa26.35■■□□□ 1.81
UBXN11-212ENST00000452980 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
UBXN11-212ENST00000452980 BICRAQ9NZM4 1560 aa26.11■■□□□ 1.77
UBXN11-212ENST00000452980 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
UBXN11-212ENST00000452980 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
UBXN11-212ENST00000452980 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
UBXN11-212ENST00000452980 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
UBXN11-212ENST00000452980 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
UBXN11-212ENST00000452980 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
UBXN11-212ENST00000452980 SCRIBQ14160 1630 aa25.56■■□□□ 1.68
UBXN11-212ENST00000452980 DNAJC5Q9H3Z4 198 aa25.17■■□□□ 1.62
UBXN11-212ENST00000452980 CUX2O14529 1486 aa24.79■■□□□ 1.56
UBXN11-212ENST00000452980 ERCC6Q03468 1493 aa24.7■■□□□ 1.55
UBXN11-212ENST00000452980 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
UBXN11-212ENST00000452980 SMARCA2P51531 1590 aa24.44■■□□□ 1.5
UBXN11-212ENST00000452980 ATAD2BQ9ULI0 1458 aa24.44■■□□□ 1.5
UBXN11-212ENST00000452980 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
UBXN11-212ENST00000452980 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
UBXN11-212ENST00000452980 NESP48681 1621 aa24.28■■□□□ 1.48
UBXN11-212ENST00000452980 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
UBXN11-212ENST00000452980 THOC2Q8NI27 1593 aaKnown RBP24.2■■□□□ 1.46
UBXN11-212ENST00000452980 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.46
UBXN11-212ENST00000452980 LAMC3Q9Y6N6 1575 aa24.17■■□□□ 1.46
UBXN11-212ENST00000452980 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
UBXN11-212ENST00000452980 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
UBXN11-212ENST00000452980 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
UBXN11-212ENST00000452980 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
UBXN11-212ENST00000452980 MROH2BQ7Z745 1585 aa23.88■■□□□ 1.41
UBXN11-212ENST00000452980 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
UBXN11-212ENST00000452980 CADPSQ9ULU8 1353 aa23.83■■□□□ 1.41
UBXN11-212ENST00000452980 WDR62O43379 1518 aa23.79■■□□□ 1.4
UBXN11-212ENST00000452980 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
UBXN11-212ENST00000452980 WIZO95785 1651 aa23.6■■□□□ 1.37
UBXN11-212ENST00000452980 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
UBXN11-212ENST00000452980 OSCARQ8IYS5 282 aa23.55■■□□□ 1.36
UBXN11-212ENST00000452980 CFTRP13569 1480 aa23.46■■□□□ 1.35
UBXN11-212ENST00000452980 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
UBXN11-212ENST00000452980 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.32
UBXN11-212ENST00000452980 PRDM2Q13029 1718 aa23.32■■□□□ 1.32
UBXN11-212ENST00000452980 RIMBP3CA6NJZ7 1639 aa23.29■■□□□ 1.32
UBXN11-212ENST00000452980 RIMBP3BA6NNM3 1639 aa23.29■■□□□ 1.32
UBXN11-212ENST00000452980 RIMBP3Q9UFD9 1639 aa23.29■■□□□ 1.32
UBXN11-212ENST00000452980 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
UBXN11-212ENST00000452980 IFT140Q96RY7 1462 aa23.22■■□□□ 1.31
UBXN11-212ENST00000452980 ARHGEF11O15085 1522 aa23.17■■□□□ 1.3
UBXN11-212ENST00000452980 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
UBXN11-212ENST00000452980 ABCC8Q09428 1581 aa23.08■■□□□ 1.29
UBXN11-212ENST00000452980 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
UBXN11-212ENST00000452980 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
UBXN11-212ENST00000452980 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
UBXN11-212ENST00000452980 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
UBXN11-212ENST00000452980 CHD1O14646 1710 aa22.99■■□□□ 1.27
UBXN11-212ENST00000452980 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
UBXN11-212ENST00000452980 TRHP20396 242 aaPredicted RBP22.93■■□□□ 1.26
UBXN11-212ENST00000452980 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
UBXN11-212ENST00000452980 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
UBXN11-212ENST00000452980 AQRO60306 1485 aaKnown RBP eCLIP22.87■■□□□ 1.25
UBXN11-212ENST00000452980 FBLN2P98095 1184 aa22.87■■□□□ 1.25
UBXN11-212ENST00000452980 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
UBXN11-212ENST00000452980 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
UBXN11-212ENST00000452980 SYNJ1O43426 1573 aa22.7■■□□□ 1.22
UBXN11-212ENST00000452980 SOGA1O94964 1423 aa22.69■■□□□ 1.22
UBXN11-212ENST00000452980 SNAPC4Q5SXM2 1469 aa22.67■■□□□ 1.22
UBXN11-212ENST00000452980 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
UBXN11-212ENST00000452980 TDRD9Q8NDG6 1382 aaKnown RBP22.67■■□□□ 1.22
UBXN11-212ENST00000452980 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
UBXN11-212ENST00000452980 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
UBXN11-212ENST00000452980 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
UBXN11-212ENST00000452980 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
UBXN11-212ENST00000452980 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
UBXN11-212ENST00000452980 GRIN2BQ13224 1484 aa22.58■■□□□ 1.2
UBXN11-212ENST00000452980 SYNJ2O15056 1496 aa22.56■■□□□ 1.2
UBXN11-212ENST00000452980 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
UBXN11-212ENST00000452980 CUX1P39880 1505 aa22.48■■□□□ 1.19
UBXN11-212ENST00000452980 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
UBXN11-212ENST00000452980 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
UBXN11-212ENST00000452980 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
UBXN11-212ENST00000452980 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
UBXN11-212ENST00000452980 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
UBXN11-212ENST00000452980 CEP170Q5SW79 1584 aa22.22■■□□□ 1.15
UBXN11-212ENST00000452980 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
UBXN11-212ENST00000452980 NUP160Q12769 1436 aa22.2■■□□□ 1.14
UBXN11-212ENST00000452980 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
UBXN11-212ENST00000452980 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
UBXN11-212ENST00000452980 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
UBXN11-212ENST00000452980 KIF13AQ9H1H9 1805 aa22.13■■□□□ 1.13
UBXN11-212ENST00000452980 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.13
UBXN11-212ENST00000452980 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
UBXN11-212ENST00000452980 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
UBXN11-212ENST00000452980 PRG4Q92954 1404 aaPredicted RBP22.03■■□□□ 1.12
UBXN11-212ENST00000452980 NPM1P06748 294 aaKnown RBP eCLIP21.98■■□□□ 1.11
UBXN11-212ENST00000452980 JPH4Q96JJ6 628 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms