RNA–Protein interactions for RNA: ENST00000452775.1

SLC6A6-202, Transcript of solute carrier family 6 member 6, humanhuman

TSL 4

Gene SLC6A6, Length 458 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-202ENST00000452775 NISCHQ9Y2I1 1504 aa35.58■■■■□ 3.29
SLC6A6-202ENST00000452775 CCDC180Q9P1Z9 1646 aa31.82■■■□□ 2.68
SLC6A6-202ENST00000452775 ABCC9O60706 1549 aa31.27■■■□□ 2.6
SLC6A6-202ENST00000452775 RB1CC1Q8TDY2 1594 aa30.07■■■□□ 2.4
SLC6A6-202ENST00000452775 NACADO15069 1562 aa29.95■■■□□ 2.39
SLC6A6-202ENST00000452775 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.39
SLC6A6-202ENST00000452775 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
SLC6A6-202ENST00000452775 ZCCHC6Q5VYS8 1495 aaKnown RBP29.57■■■□□ 2.32
SLC6A6-202ENST00000452775 DCAF1Q9Y4B6 1507 aa29.45■■■□□ 2.31
SLC6A6-202ENST00000452775 UNC13AQ9UPW8 1703 aa29.32■■■□□ 2.28
SLC6A6-202ENST00000452775 PABPN1Q86U42 306 aaKnown RBP eCLIP29.17■■■□□ 2.26
SLC6A6-202ENST00000452775 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.23
SLC6A6-202ENST00000452775 SCRIBQ14160 1630 aa28.97■■■□□ 2.23
SLC6A6-202ENST00000452775 SHROOM4Q9ULL8 1493 aa28.83■■■□□ 2.21
SLC6A6-202ENST00000452775 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
SLC6A6-202ENST00000452775 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
SLC6A6-202ENST00000452775 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
SLC6A6-202ENST00000452775 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
SLC6A6-202ENST00000452775 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
SLC6A6-202ENST00000452775 BAZ1AQ9NRL2 1556 aaPredicted RBP27.66■■■□□ 2.02
SLC6A6-202ENST00000452775 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
SLC6A6-202ENST00000452775 NCAPD3P42695 1498 aa27.57■■■□□ 2
SLC6A6-202ENST00000452775 ATAD2BQ9ULI0 1458 aa27.55■■■□□ 2
SLC6A6-202ENST00000452775 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
SLC6A6-202ENST00000452775 BAZ1BQ9UIG0 1483 aaKnown RBP27.39■■□□□ 1.98
SLC6A6-202ENST00000452775 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.97
SLC6A6-202ENST00000452775 MROH2BQ7Z745 1585 aa27.38■■□□□ 1.97
SLC6A6-202ENST00000452775 WIZO95785 1651 aa27.12■■□□□ 1.93
SLC6A6-202ENST00000452775 ERCC6Q03468 1493 aa27.08■■□□□ 1.93
SLC6A6-202ENST00000452775 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
SLC6A6-202ENST00000452775 LAMC3Q9Y6N6 1575 aa26.96■■□□□ 1.91
SLC6A6-202ENST00000452775 NESP48681 1621 aa26.94■■□□□ 1.9
SLC6A6-202ENST00000452775 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
SLC6A6-202ENST00000452775 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
SLC6A6-202ENST00000452775 CUX2O14529 1486 aa26.81■■□□□ 1.88
SLC6A6-202ENST00000452775 CADPSQ9ULU8 1353 aa26.79■■□□□ 1.88
SLC6A6-202ENST00000452775 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.86
SLC6A6-202ENST00000452775 THOC2Q8NI27 1593 aaKnown RBP26.61■■□□□ 1.85
SLC6A6-202ENST00000452775 CFTRP13569 1480 aa26.55■■□□□ 1.84
SLC6A6-202ENST00000452775 CEP164Q9UPV0 1460 aa26.52■■□□□ 1.84
SLC6A6-202ENST00000452775 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
SLC6A6-202ENST00000452775 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
SLC6A6-202ENST00000452775 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
SLC6A6-202ENST00000452775 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
SLC6A6-202ENST00000452775 WDR62O43379 1518 aa26.39■■□□□ 1.81
SLC6A6-202ENST00000452775 SUPT5HO00267 1087 aaKnown RBP26.27■■□□□ 1.8
SLC6A6-202ENST00000452775 DNAJC5Q9H3Z4 198 aa26.19■■□□□ 1.78
SLC6A6-202ENST00000452775 URB2Q14146 1524 aaKnown RBP26.18■■□□□ 1.78
SLC6A6-202ENST00000452775 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
SLC6A6-202ENST00000452775 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
SLC6A6-202ENST00000452775 DNMBPQ6XZF7 1577 aa26.01■■□□□ 1.75
SLC6A6-202ENST00000452775 IFT140Q96RY7 1462 aa25.96■■□□□ 1.75
SLC6A6-202ENST00000452775 POLA1P09884 1462 aaPredicted RBP25.78■■□□□ 1.72
SLC6A6-202ENST00000452775 ZNF608Q9ULD9 1512 aaPredicted RBP25.76■■□□□ 1.71
SLC6A6-202ENST00000452775 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
SLC6A6-202ENST00000452775 EIF4G3O43432 1585 aaKnown RBP25.73■■□□□ 1.71
SLC6A6-202ENST00000452775 SOGA1O94964 1423 aa25.72■■□□□ 1.71
SLC6A6-202ENST00000452775 CUX1P39880 1505 aa25.71■■□□□ 1.71
SLC6A6-202ENST00000452775 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
SLC6A6-202ENST00000452775 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
SLC6A6-202ENST00000452775 RAD54L2Q9Y4B4 1467 aa25.65■■□□□ 1.7
SLC6A6-202ENST00000452775 WDR97A6NE52 1622 aa25.63■■□□□ 1.69
SLC6A6-202ENST00000452775 AQRO60306 1485 aaKnown RBP eCLIP25.63■■□□□ 1.697e-9■■□□□ 13.9
SLC6A6-202ENST00000452775 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
SLC6A6-202ENST00000452775 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
SLC6A6-202ENST00000452775 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
SLC6A6-202ENST00000452775 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
SLC6A6-202ENST00000452775 FBLN2P98095 1184 aa25.49■■□□□ 1.67
SLC6A6-202ENST00000452775 CHD1O14646 1710 aa25.47■■□□□ 1.67
SLC6A6-202ENST00000452775 GRIN2BQ13224 1484 aa25.46■■□□□ 1.67
SLC6A6-202ENST00000452775 ABCA10Q8WWZ4 1543 aa25.44■■□□□ 1.66
SLC6A6-202ENST00000452775 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
SLC6A6-202ENST00000452775 GAPVD1Q14C86 1478 aa25.42■■□□□ 1.66
SLC6A6-202ENST00000452775 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
SLC6A6-202ENST00000452775 MAGI1Q96QZ7 1491 aaPredicted RBP25.41■■□□□ 1.66
SLC6A6-202ENST00000452775 PBRM1Q86U86 1689 aa25.4■■□□□ 1.66
SLC6A6-202ENST00000452775 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
SLC6A6-202ENST00000452775 ABCA5Q8WWZ7 1642 aa25.35■■□□□ 1.65
SLC6A6-202ENST00000452775 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
SLC6A6-202ENST00000452775 SYNJ2O15056 1496 aa25.3■■□□□ 1.64
SLC6A6-202ENST00000452775 RIMBP3CA6NJZ7 1639 aa25.25■■□□□ 1.63
SLC6A6-202ENST00000452775 RIMBP3BA6NNM3 1639 aa25.25■■□□□ 1.63
SLC6A6-202ENST00000452775 RIMBP3Q9UFD9 1639 aa25.25■■□□□ 1.63
SLC6A6-202ENST00000452775 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
SLC6A6-202ENST00000452775 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
SLC6A6-202ENST00000452775 ADAMTS12P58397 1594 aa25.14■■□□□ 1.61
SLC6A6-202ENST00000452775 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
SLC6A6-202ENST00000452775 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
SLC6A6-202ENST00000452775 GRIN2AQ12879 1464 aa25.1■■□□□ 1.61
SLC6A6-202ENST00000452775 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
SLC6A6-202ENST00000452775 CYB5RLQ6IPT4 315 aa25.04■■□□□ 1.6
SLC6A6-202ENST00000452775 NUP160Q12769 1436 aa24.95■■□□□ 1.59
SLC6A6-202ENST00000452775 CUL7Q14999 1698 aa24.95■■□□□ 1.58
SLC6A6-202ENST00000452775 ARAP1Q96P48 1450 aa24.95■■□□□ 1.58
SLC6A6-202ENST00000452775 CEP170Q5SW79 1584 aa24.94■■□□□ 1.58
SLC6A6-202ENST00000452775 IGF1RP08069 1367 aa24.89■■□□□ 1.57
SLC6A6-202ENST00000452775 SHROOM2Q13796 1616 aa24.81■■□□□ 1.56
SLC6A6-202ENST00000452775 CARMIL1Q5VZK9 1371 aa24.8■■□□□ 1.56
SLC6A6-202ENST00000452775 RUSC2Q8N2Y8 1516 aa24.76■■□□□ 1.55
SLC6A6-202ENST00000452775 JPH4Q96JJ6 628 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms