RNA–Protein interactions for RNA: ENST00000452505.1

LINC01640-201, Transcript of long intergenic non-protein coding RNA 1640, humanhuman

TSL 4 BASIC

Gene LINC01640, Length 550 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01640-201ENST00000452505 NISCHQ9Y2I1 1504 aa40.97■■■■■ 4.15
LINC01640-201ENST00000452505 CCDC180Q9P1Z9 1646 aa36.61■■■■□ 3.45
LINC01640-201ENST00000452505 ABCC9O60706 1549 aa35.96■■■■□ 3.35
LINC01640-201ENST00000452505 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
LINC01640-201ENST00000452505 NACADO15069 1562 aa34.44■■■■□ 3.1
LINC01640-201ENST00000452505 DCAF8L2P0C7V8 631 aa34.23■■■■□ 3.07
LINC01640-201ENST00000452505 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
LINC01640-201ENST00000452505 ZCCHC6Q5VYS8 1495 aaKnown RBP34.07■■■■□ 3.05
LINC01640-201ENST00000452505 DCAF1Q9Y4B6 1507 aa33.9■■■■□ 3.02
LINC01640-201ENST00000452505 UNC13AQ9UPW8 1703 aa33.85■■■■□ 3.01
LINC01640-201ENST00000452505 PABPN1Q86U42 306 aaKnown RBP eCLIP33.52■■■□□ 2.96
LINC01640-201ENST00000452505 BICRAQ9NZM4 1560 aa33.51■■■□□ 2.95
LINC01640-201ENST00000452505 SCRIBQ14160 1630 aa33.32■■■□□ 2.92
LINC01640-201ENST00000452505 DNAJC5BQ9UF47 199 aa33.22■■■□□ 2.91
LINC01640-201ENST00000452505 SHROOM4Q9ULL8 1493 aa33.13■■■□□ 2.89
LINC01640-201ENST00000452505 EIF4G1Q04637 1599 aaKnown RBP32.63■■■□□ 2.81
LINC01640-201ENST00000452505 CC2D2AQ9P2K1 1620 aa32.58■■■□□ 2.81
LINC01640-201ENST00000452505 CECR2Q9BXF3 1484 aa32.35■■■□□ 2.77
LINC01640-201ENST00000452505 SMARCA4P51532 1647 aa31.87■■■□□ 2.69
LINC01640-201ENST00000452505 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
LINC01640-201ENST00000452505 NCAPD3P42695 1498 aa31.75■■■□□ 2.67
LINC01640-201ENST00000452505 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
LINC01640-201ENST00000452505 SMARCA2P51531 1590 aa31.69■■■□□ 2.66
LINC01640-201ENST00000452505 HMGXB3Q12766 1538 aa31.6■■■□□ 2.65
LINC01640-201ENST00000452505 PEG3Q9GZU2 1588 aa31.57■■■□□ 2.64
LINC01640-201ENST00000452505 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
LINC01640-201ENST00000452505 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.62
LINC01640-201ENST00000452505 WIZO95785 1651 aa31.25■■■□□ 2.59
LINC01640-201ENST00000452505 RSF1Q96T23 1441 aaPredicted RBP31.08■■■□□ 2.57
LINC01640-201ENST00000452505 NESP48681 1621 aa31.06■■■□□ 2.56
LINC01640-201ENST00000452505 ERCC6Q03468 1493 aa31.02■■■□□ 2.56
LINC01640-201ENST00000452505 LAMC3Q9Y6N6 1575 aa30.99■■■□□ 2.55
LINC01640-201ENST00000452505 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
LINC01640-201ENST00000452505 CUX2O14529 1486 aa30.82■■■□□ 2.52
LINC01640-201ENST00000452505 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
LINC01640-201ENST00000452505 KIF21AQ7Z4S6 1674 aa30.77■■■□□ 2.52
LINC01640-201ENST00000452505 PDS5BQ9NTI5 1447 aa30.74■■■□□ 2.51
LINC01640-201ENST00000452505 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
LINC01640-201ENST00000452505 CFTRP13569 1480 aa30.57■■■□□ 2.48
LINC01640-201ENST00000452505 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
LINC01640-201ENST00000452505 PRDM2Q13029 1718 aa30.46■■■□□ 2.47
LINC01640-201ENST00000452505 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.47
LINC01640-201ENST00000452505 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
LINC01640-201ENST00000452505 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
LINC01640-201ENST00000452505 WDR62O43379 1518 aa30.39■■■□□ 2.46
LINC01640-201ENST00000452505 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
LINC01640-201ENST00000452505 DNAJC5Q9H3Z4 198 aa30.13■■■□□ 2.41
LINC01640-201ENST00000452505 SUPT5HO00267 1087 aaKnown RBP30.04■■■□□ 2.4
LINC01640-201ENST00000452505 TOPBP1Q92547 1522 aa29.95■■■□□ 2.38
LINC01640-201ENST00000452505 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
LINC01640-201ENST00000452505 DNMBPQ6XZF7 1577 aa29.91■■■□□ 2.38
LINC01640-201ENST00000452505 IFT140Q96RY7 1462 aa29.81■■■□□ 2.36
LINC01640-201ENST00000452505 ZNF608Q9ULD9 1512 aaPredicted RBP29.7■■■□□ 2.34
LINC01640-201ENST00000452505 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
LINC01640-201ENST00000452505 POLA1P09884 1462 aaPredicted RBP29.67■■■□□ 2.34
LINC01640-201ENST00000452505 CUX1P39880 1505 aa29.63■■■□□ 2.33
LINC01640-201ENST00000452505 EIF4G3O43432 1585 aaKnown RBP29.61■■■□□ 2.33
LINC01640-201ENST00000452505 FGD5Q6ZNL6 1462 aa29.56■■■□□ 2.32
LINC01640-201ENST00000452505 RAD54L2Q9Y4B4 1467 aa29.53■■■□□ 2.32
LINC01640-201ENST00000452505 SOGA1O94964 1423 aa29.52■■■□□ 2.32
LINC01640-201ENST00000452505 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.31
LINC01640-201ENST00000452505 WDR97A6NE52 1622 aa29.45■■■□□ 2.3
LINC01640-201ENST00000452505 OSCARQ8IYS5 282 aa29.44■■■□□ 2.3
LINC01640-201ENST00000452505 TDRD9Q8NDG6 1382 aaKnown RBP29.37■■■□□ 2.29
LINC01640-201ENST00000452505 BIVM-ERCC5R4GMW8 1640 aa29.35■■■□□ 2.29
LINC01640-201ENST00000452505 TOP2BQ02880 1626 aa29.33■■■□□ 2.29
LINC01640-201ENST00000452505 CHD1O14646 1710 aa29.33■■■□□ 2.29
LINC01640-201ENST00000452505 WRNQ14191 1432 aaPredicted RBP eCLIP29.31■■■□□ 2.28
LINC01640-201ENST00000452505 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
LINC01640-201ENST00000452505 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
LINC01640-201ENST00000452505 PBRM1Q86U86 1689 aa29.23■■■□□ 2.27
LINC01640-201ENST00000452505 GRIN2BQ13224 1484 aa29.22■■■□□ 2.27
LINC01640-201ENST00000452505 SNAPC4Q5SXM2 1469 aa29.22■■■□□ 2.27
LINC01640-201ENST00000452505 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
LINC01640-201ENST00000452505 GAPVD1Q14C86 1478 aa29.19■■■□□ 2.26
LINC01640-201ENST00000452505 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
LINC01640-201ENST00000452505 FBLN2P98095 1184 aa29.13■■■□□ 2.25
LINC01640-201ENST00000452505 RIMBP3CA6NJZ7 1639 aa29.07■■■□□ 2.24
LINC01640-201ENST00000452505 RIMBP3BA6NNM3 1639 aa29.07■■■□□ 2.24
LINC01640-201ENST00000452505 SYNJ2O15056 1496 aa29.07■■■□□ 2.24
LINC01640-201ENST00000452505 RIMBP3Q9UFD9 1639 aa29.07■■■□□ 2.24
LINC01640-201ENST00000452505 CHMP7Q8WUX9 453 aaPredicted RBP29.03■■■□□ 2.24
LINC01640-201ENST00000452505 ARHGEF11O15085 1522 aa29.01■■■□□ 2.23
LINC01640-201ENST00000452505 TRIM41Q8WV44 630 aa29■■■□□ 2.23
LINC01640-201ENST00000452505 CLASP1Q7Z460 1538 aa28.96■■■□□ 2.23
LINC01640-201ENST00000452505 ADAMTS12P58397 1594 aa28.94■■■□□ 2.22
LINC01640-201ENST00000452505 ERICH3Q5RHP9 1530 aa28.93■■■□□ 2.22
LINC01640-201ENST00000452505 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
LINC01640-201ENST00000452505 FHAD1B1AJZ9 1412 aa28.84■■■□□ 2.21
LINC01640-201ENST00000452505 ARAP1Q96P48 1450 aa28.76■■■□□ 2.19
LINC01640-201ENST00000452505 CEP170Q5SW79 1584 aa28.75■■■□□ 2.19
LINC01640-201ENST00000452505 NUP160Q12769 1436 aa28.74■■■□□ 2.19
LINC01640-201ENST00000452505 KIF27Q86VH2 1401 aa28.72■■■□□ 2.19
LINC01640-201ENST00000452505 CYB5RLQ6IPT4 315 aa28.7■■■□□ 2.18
LINC01640-201ENST00000452505 CUL7Q14999 1698 aa28.64■■■□□ 2.18
LINC01640-201ENST00000452505 IGF1RP08069 1367 aa28.62■■■□□ 2.17
LINC01640-201ENST00000452505 SHROOM2Q13796 1616 aa28.6■■■□□ 2.17
LINC01640-201ENST00000452505 ERCC6L2Q5T890 1561 aa28.53■■■□□ 2.16
LINC01640-201ENST00000452505 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
LINC01640-201ENST00000452505 CARMIL1Q5VZK9 1371 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms