RNA–Protein interactions for RNA: ENST00000452464.6

SCARB2-202, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2 BASIC

Gene SCARB2, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-202ENST00000452464 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
SCARB2-202ENST00000452464 CCDC180Q9P1Z9 1646 aa26.39■■□□□ 1.82
SCARB2-202ENST00000452464 ABCC9O60706 1549 aa26.36■■□□□ 1.81
SCARB2-202ENST00000452464 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
SCARB2-202ENST00000452464 NACADO15069 1562 aa24.98■■□□□ 1.59
SCARB2-202ENST00000452464 DCAF8L2P0C7V8 631 aa24.94■■□□□ 1.58
SCARB2-202ENST00000452464 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
SCARB2-202ENST00000452464 DNAJC5BQ9UF47 199 aa24.65■■□□□ 1.54
SCARB2-202ENST00000452464 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
SCARB2-202ENST00000452464 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
SCARB2-202ENST00000452464 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.49
SCARB2-202ENST00000452464 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
SCARB2-202ENST00000452464 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
SCARB2-202ENST00000452464 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
SCARB2-202ENST00000452464 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
SCARB2-202ENST00000452464 CC2D2AQ9P2K1 1620 aa23.8■■□□□ 1.4
SCARB2-202ENST00000452464 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
SCARB2-202ENST00000452464 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
SCARB2-202ENST00000452464 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
SCARB2-202ENST00000452464 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
SCARB2-202ENST00000452464 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
SCARB2-202ENST00000452464 SMARCA4P51532 1647 aa22.92■■□□□ 1.26
SCARB2-202ENST00000452464 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
SCARB2-202ENST00000452464 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
SCARB2-202ENST00000452464 ERCC6Q03468 1493 aa22.84■■□□□ 1.25
SCARB2-202ENST00000452464 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
SCARB2-202ENST00000452464 CUX2O14529 1486 aa22.77■■□□□ 1.24
SCARB2-202ENST00000452464 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
SCARB2-202ENST00000452464 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
SCARB2-202ENST00000452464 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
SCARB2-202ENST00000452464 NESP48681 1621 aa22.61■■□□□ 1.21
SCARB2-202ENST00000452464 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
SCARB2-202ENST00000452464 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
SCARB2-202ENST00000452464 WIZO95785 1651 aa22.46■■□□□ 1.19
SCARB2-202ENST00000452464 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
SCARB2-202ENST00000452464 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
SCARB2-202ENST00000452464 KIF21AQ7Z4S6 1674 aa22.31■■□□□ 1.16
SCARB2-202ENST00000452464 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
SCARB2-202ENST00000452464 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
SCARB2-202ENST00000452464 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
SCARB2-202ENST00000452464 WDR62O43379 1518 aa22.12■■□□□ 1.13
SCARB2-202ENST00000452464 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
SCARB2-202ENST00000452464 CFTRP13569 1480 aa22.1■■□□□ 1.13
SCARB2-202ENST00000452464 FANCD2Q9BXW9 1451 aa22.1■■□□□ 1.13
SCARB2-202ENST00000452464 PRDM2Q13029 1718 aa21.87■■□□□ 1.09
SCARB2-202ENST00000452464 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
SCARB2-202ENST00000452464 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
SCARB2-202ENST00000452464 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
SCARB2-202ENST00000452464 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
SCARB2-202ENST00000452464 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
SCARB2-202ENST00000452464 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
SCARB2-202ENST00000452464 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
SCARB2-202ENST00000452464 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
SCARB2-202ENST00000452464 ZNF608Q9ULD9 1512 aaPredicted RBP21.59■■□□□ 1.05
SCARB2-202ENST00000452464 SUPT5HO00267 1087 aaKnown RBP21.5■■□□□ 1.03
SCARB2-202ENST00000452464 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
SCARB2-202ENST00000452464 POLA1P09884 1462 aaPredicted RBP21.44■■□□□ 1.02
SCARB2-202ENST00000452464 AQRO60306 1485 aaKnown RBP eCLIP21.44■■□□□ 1.02
SCARB2-202ENST00000452464 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
SCARB2-202ENST00000452464 SOGA1O94964 1423 aa21.4■■□□□ 1.02
SCARB2-202ENST00000452464 FBLN2P98095 1184 aa21.39■■□□□ 1.01
SCARB2-202ENST00000452464 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
SCARB2-202ENST00000452464 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
SCARB2-202ENST00000452464 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
SCARB2-202ENST00000452464 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
SCARB2-202ENST00000452464 ARHGEF11O15085 1522 aa21.34■■□□□ 1.01
SCARB2-202ENST00000452464 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1
SCARB2-202ENST00000452464 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
SCARB2-202ENST00000452464 WDR97A6NE52 1622 aa21.3■■□□□ 1
SCARB2-202ENST00000452464 CHD1O14646 1710 aa21.29■■□□□ 1
SCARB2-202ENST00000452464 CUX1P39880 1505 aa21.27■■□□□ 1
SCARB2-202ENST00000452464 CYB5RLQ6IPT4 315 aa21.25■□□□□ 0.99
SCARB2-202ENST00000452464 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
SCARB2-202ENST00000452464 SNAPC4Q5SXM2 1469 aa21.22■□□□□ 0.99
SCARB2-202ENST00000452464 GRIN2BQ13224 1484 aa21.21■□□□□ 0.99
SCARB2-202ENST00000452464 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
SCARB2-202ENST00000452464 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
SCARB2-202ENST00000452464 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
SCARB2-202ENST00000452464 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
SCARB2-202ENST00000452464 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
SCARB2-202ENST00000452464 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
SCARB2-202ENST00000452464 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.96
SCARB2-202ENST00000452464 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
SCARB2-202ENST00000452464 TRHP20396 242 aaPredicted RBP21.06■□□□□ 0.96
SCARB2-202ENST00000452464 PBRM1Q86U86 1689 aa21.04■□□□□ 0.96
SCARB2-202ENST00000452464 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
SCARB2-202ENST00000452464 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
SCARB2-202ENST00000452464 TOP2BQ02880 1626 aa20.99■□□□□ 0.95
SCARB2-202ENST00000452464 GRIN2AQ12879 1464 aa20.91■□□□□ 0.94
SCARB2-202ENST00000452464 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
SCARB2-202ENST00000452464 ADAMTS12P58397 1594 aa20.86■□□□□ 0.93
SCARB2-202ENST00000452464 ERICH3Q5RHP9 1530 aa20.85■□□□□ 0.93
SCARB2-202ENST00000452464 NUP160Q12769 1436 aa20.83■□□□□ 0.92
SCARB2-202ENST00000452464 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
SCARB2-202ENST00000452464 SHROOM2Q13796 1616 aa20.69■□□□□ 0.9
SCARB2-202ENST00000452464 ERCC6L2Q5T890 1561 aa20.69■□□□□ 0.9
SCARB2-202ENST00000452464 JPH4Q96JJ6 628 aa20.68■□□□□ 0.9
SCARB2-202ENST00000452464 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
SCARB2-202ENST00000452464 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
SCARB2-202ENST00000452464 IGF1RP08069 1367 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms