RNA–Protein interactions for RNA: ENST00000452261.5

EPB41L1-215, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 5

Gene EPB41L1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-215ENST00000452261 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
EPB41L1-215ENST00000452261 ABCC9O60706 1549 aa28.26■■■□□ 2.11
EPB41L1-215ENST00000452261 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
EPB41L1-215ENST00000452261 RB1CC1Q8TDY2 1594 aa26.89■■□□□ 1.9
EPB41L1-215ENST00000452261 NACADO15069 1562 aa26.71■■□□□ 1.87
EPB41L1-215ENST00000452261 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
EPB41L1-215ENST00000452261 DNAJC5BQ9UF47 199 aa26.53■■□□□ 1.84
EPB41L1-215ENST00000452261 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
EPB41L1-215ENST00000452261 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
EPB41L1-215ENST00000452261 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
EPB41L1-215ENST00000452261 BICRAQ9NZM4 1560 aa26.13■■□□□ 1.77
EPB41L1-215ENST00000452261 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
EPB41L1-215ENST00000452261 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
EPB41L1-215ENST00000452261 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
EPB41L1-215ENST00000452261 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
EPB41L1-215ENST00000452261 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
EPB41L1-215ENST00000452261 EIF4G1Q04637 1599 aaKnown RBP25.48■■□□□ 1.67
EPB41L1-215ENST00000452261 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
EPB41L1-215ENST00000452261 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
EPB41L1-215ENST00000452261 ATAD2BQ9ULI0 1458 aa24.59■■□□□ 1.53
EPB41L1-215ENST00000452261 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
EPB41L1-215ENST00000452261 SMARCA2P51531 1590 aa24.52■■□□□ 1.52
EPB41L1-215ENST00000452261 HMGXB3Q12766 1538 aa24.48■■□□□ 1.51
EPB41L1-215ENST00000452261 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
EPB41L1-215ENST00000452261 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
EPB41L1-215ENST00000452261 BAZ1BQ9UIG0 1483 aaKnown RBP24.35■■□□□ 1.49
EPB41L1-215ENST00000452261 DNAJC5Q9H3Z4 198 aa24.35■■□□□ 1.49
EPB41L1-215ENST00000452261 CUX2O14529 1486 aa24.34■■□□□ 1.49
EPB41L1-215ENST00000452261 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.48
EPB41L1-215ENST00000452261 NESP48681 1621 aa24.29■■□□□ 1.48
EPB41L1-215ENST00000452261 MROH2BQ7Z745 1585 aa24.28■■□□□ 1.48
EPB41L1-215ENST00000452261 LAMC3Q9Y6N6 1575 aa24.11■■□□□ 1.45
EPB41L1-215ENST00000452261 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
EPB41L1-215ENST00000452261 WIZO95785 1651 aa23.99■■□□□ 1.43
EPB41L1-215ENST00000452261 KIF21AQ7Z4S6 1674 aa23.99■■□□□ 1.43
EPB41L1-215ENST00000452261 PDS5BQ9NTI5 1447 aa23.96■■□□□ 1.43
EPB41L1-215ENST00000452261 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
EPB41L1-215ENST00000452261 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
EPB41L1-215ENST00000452261 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
EPB41L1-215ENST00000452261 WDR62O43379 1518 aa23.69■■□□□ 1.38
EPB41L1-215ENST00000452261 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
EPB41L1-215ENST00000452261 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
EPB41L1-215ENST00000452261 CFTRP13569 1480 aa23.65■■□□□ 1.38
EPB41L1-215ENST00000452261 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
EPB41L1-215ENST00000452261 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
EPB41L1-215ENST00000452261 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
EPB41L1-215ENST00000452261 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
EPB41L1-215ENST00000452261 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
EPB41L1-215ENST00000452261 OSCARQ8IYS5 282 aa23.26■■□□□ 1.31
EPB41L1-215ENST00000452261 TOPBP1Q92547 1522 aa23.2■■□□□ 1.3
EPB41L1-215ENST00000452261 IFT140Q96RY7 1462 aa23.19■■□□□ 1.3
EPB41L1-215ENST00000452261 ZNF608Q9ULD9 1512 aaPredicted RBP23.17■■□□□ 1.3
EPB41L1-215ENST00000452261 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
EPB41L1-215ENST00000452261 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
EPB41L1-215ENST00000452261 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
EPB41L1-215ENST00000452261 TARBP1Q13395 1621 aaKnown RBP23■■□□□ 1.27
EPB41L1-215ENST00000452261 AQRO60306 1485 aaKnown RBP eCLIP22.97■■□□□ 1.271e-8■■□□□ 13.5
EPB41L1-215ENST00000452261 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
EPB41L1-215ENST00000452261 RIMBP3CA6NJZ7 1639 aa22.94■■□□□ 1.26
EPB41L1-215ENST00000452261 RIMBP3BA6NNM3 1639 aa22.94■■□□□ 1.26
EPB41L1-215ENST00000452261 RIMBP3Q9UFD9 1639 aa22.94■■□□□ 1.26
EPB41L1-215ENST00000452261 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
EPB41L1-215ENST00000452261 CHD1O14646 1710 aa22.88■■□□□ 1.25
EPB41L1-215ENST00000452261 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
EPB41L1-215ENST00000452261 SOGA1O94964 1423 aa22.86■■□□□ 1.25
EPB41L1-215ENST00000452261 TDRD9Q8NDG6 1382 aaKnown RBP22.83■■□□□ 1.25
EPB41L1-215ENST00000452261 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
EPB41L1-215ENST00000452261 FBLN2P98095 1184 aa22.82■■□□□ 1.24
EPB41L1-215ENST00000452261 CUX1P39880 1505 aa22.81■■□□□ 1.24
EPB41L1-215ENST00000452261 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
EPB41L1-215ENST00000452261 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
EPB41L1-215ENST00000452261 CYB5RLQ6IPT4 315 aa22.72■■□□□ 1.23
EPB41L1-215ENST00000452261 SNAPC4Q5SXM2 1469 aa22.72■■□□□ 1.23
EPB41L1-215ENST00000452261 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
EPB41L1-215ENST00000452261 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
EPB41L1-215ENST00000452261 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
EPB41L1-215ENST00000452261 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
EPB41L1-215ENST00000452261 CLASP1Q7Z460 1538 aa22.59■■□□□ 1.21
EPB41L1-215ENST00000452261 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
EPB41L1-215ENST00000452261 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
EPB41L1-215ENST00000452261 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
EPB41L1-215ENST00000452261 PBRM1Q86U86 1689 aa22.58■■□□□ 1.2
EPB41L1-215ENST00000452261 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
EPB41L1-215ENST00000452261 ABCA5Q8WWZ7 1642 aa22.52■■□□□ 1.2
EPB41L1-215ENST00000452261 WRNQ14191 1432 aaPredicted RBP eCLIP22.47■■□□□ 1.19
EPB41L1-215ENST00000452261 TRHP20396 242 aaPredicted RBP22.46■■□□□ 1.19
EPB41L1-215ENST00000452261 BIVM-ERCC5R4GMW8 1640 aa22.45■■□□□ 1.18
EPB41L1-215ENST00000452261 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
EPB41L1-215ENST00000452261 GRIN2AQ12879 1464 aa22.36■■□□□ 1.17
EPB41L1-215ENST00000452261 ADAMTS12P58397 1594 aa22.35■■□□□ 1.17
EPB41L1-215ENST00000452261 FHAD1B1AJZ9 1412 aa22.3■■□□□ 1.16
EPB41L1-215ENST00000452261 NUP160Q12769 1436 aa22.3■■□□□ 1.16
EPB41L1-215ENST00000452261 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
EPB41L1-215ENST00000452261 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
EPB41L1-215ENST00000452261 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
EPB41L1-215ENST00000452261 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
EPB41L1-215ENST00000452261 JPH4Q96JJ6 628 aa22.09■■□□□ 1.13
EPB41L1-215ENST00000452261 PRG4Q92954 1404 aaPredicted RBP22.08■■□□□ 1.13
EPB41L1-215ENST00000452261 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
EPB41L1-215ENST00000452261 IGF1RP08069 1367 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms