RNA–Protein interactions for RNA: ENST00000452065.5

HDLBP-224, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-224ENST00000452065 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
HDLBP-224ENST00000452065 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.38
HDLBP-224ENST00000452065 ABCC9O60706 1549 aa22.89■■□□□ 1.26
HDLBP-224ENST00000452065 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
HDLBP-224ENST00000452065 NACADO15069 1562 aa22.23■■□□□ 1.15
HDLBP-224ENST00000452065 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.14
HDLBP-224ENST00000452065 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
HDLBP-224ENST00000452065 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
HDLBP-224ENST00000452065 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
HDLBP-224ENST00000452065 UNC13AQ9UPW8 1703 aa21.7■■□□□ 1.06
HDLBP-224ENST00000452065 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
HDLBP-224ENST00000452065 BICRAQ9NZM4 1560 aa21.5■■□□□ 1.03
HDLBP-224ENST00000452065 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
HDLBP-224ENST00000452065 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
HDLBP-224ENST00000452065 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
HDLBP-224ENST00000452065 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
HDLBP-224ENST00000452065 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
HDLBP-224ENST00000452065 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
HDLBP-224ENST00000452065 BAZ1AQ9NRL2 1556 aaPredicted RBP20.69■□□□□ 0.9
HDLBP-224ENST00000452065 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
HDLBP-224ENST00000452065 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
HDLBP-224ENST00000452065 SMARCA2P51531 1590 aa20.51■□□□□ 0.87
HDLBP-224ENST00000452065 PEG3Q9GZU2 1588 aa20.51■□□□□ 0.87
HDLBP-224ENST00000452065 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
HDLBP-224ENST00000452065 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
HDLBP-224ENST00000452065 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
HDLBP-224ENST00000452065 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
HDLBP-224ENST00000452065 WIZO95785 1651 aa20.36■□□□□ 0.85
HDLBP-224ENST00000452065 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.85
HDLBP-224ENST00000452065 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
HDLBP-224ENST00000452065 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
HDLBP-224ENST00000452065 LAMC3Q9Y6N6 1575 aa19.93■□□□□ 0.78
HDLBP-224ENST00000452065 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
HDLBP-224ENST00000452065 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
HDLBP-224ENST00000452065 NESP48681 1621 aa19.87■□□□□ 0.77
HDLBP-224ENST00000452065 CFTRP13569 1480 aa19.83■□□□□ 0.76
HDLBP-224ENST00000452065 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.76
HDLBP-224ENST00000452065 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
HDLBP-224ENST00000452065 ERCC6Q03468 1493 aa19.72■□□□□ 0.75
HDLBP-224ENST00000452065 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
HDLBP-224ENST00000452065 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
HDLBP-224ENST00000452065 DNAJC5Q9H3Z4 198 aa19.61■□□□□ 0.73
HDLBP-224ENST00000452065 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
HDLBP-224ENST00000452065 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
HDLBP-224ENST00000452065 MRC2Q9UBG0 1479 aa19.53■□□□□ 0.72
HDLBP-224ENST00000452065 CUX2O14529 1486 aa19.49■□□□□ 0.71
HDLBP-224ENST00000452065 WDR62O43379 1518 aa19.47■□□□□ 0.71
HDLBP-224ENST00000452065 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
HDLBP-224ENST00000452065 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
HDLBP-224ENST00000452065 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
HDLBP-224ENST00000452065 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
HDLBP-224ENST00000452065 CUX1P39880 1505 aa19.28■□□□□ 0.68
HDLBP-224ENST00000452065 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
HDLBP-224ENST00000452065 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
HDLBP-224ENST00000452065 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
HDLBP-224ENST00000452065 POLA1P09884 1462 aaPredicted RBP19.2■□□□□ 0.66
HDLBP-224ENST00000452065 IFT140Q96RY7 1462 aa19.19■□□□□ 0.66
HDLBP-224ENST00000452065 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
HDLBP-224ENST00000452065 SYNJ1O43426 1573 aa19.16■□□□□ 0.66
HDLBP-224ENST00000452065 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
HDLBP-224ENST00000452065 SOGA1O94964 1423 aa19.14■□□□□ 0.65
HDLBP-224ENST00000452065 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
HDLBP-224ENST00000452065 ZNF608Q9ULD9 1512 aaPredicted RBP19.05■□□□□ 0.64
HDLBP-224ENST00000452065 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
HDLBP-224ENST00000452065 ABCA10Q8WWZ4 1543 aa19.02■□□□□ 0.64
HDLBP-224ENST00000452065 EIF4G3O43432 1585 aaKnown RBP19■□□□□ 0.63
HDLBP-224ENST00000452065 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.632e-6■■■■□ 23.9
HDLBP-224ENST00000452065 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
HDLBP-224ENST00000452065 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
HDLBP-224ENST00000452065 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
HDLBP-224ENST00000452065 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
HDLBP-224ENST00000452065 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
HDLBP-224ENST00000452065 PBRM1Q86U86 1689 aa18.87■□□□□ 0.61
HDLBP-224ENST00000452065 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
HDLBP-224ENST00000452065 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
HDLBP-224ENST00000452065 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
HDLBP-224ENST00000452065 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
HDLBP-224ENST00000452065 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
HDLBP-224ENST00000452065 SYNJ2O15056 1496 aa18.75■□□□□ 0.59
HDLBP-224ENST00000452065 CHD1O14646 1710 aa18.74■□□□□ 0.59
HDLBP-224ENST00000452065 IGF1RP08069 1367 aa18.74■□□□□ 0.59
HDLBP-224ENST00000452065 OSCARQ8IYS5 282 aa18.74■□□□□ 0.59
HDLBP-224ENST00000452065 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
HDLBP-224ENST00000452065 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
HDLBP-224ENST00000452065 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
HDLBP-224ENST00000452065 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
HDLBP-224ENST00000452065 FBLN2P98095 1184 aa18.69■□□□□ 0.58
HDLBP-224ENST00000452065 CUL7Q14999 1698 aa18.69■□□□□ 0.58
HDLBP-224ENST00000452065 GRIN2AQ12879 1464 aa18.64■□□□□ 0.57
HDLBP-224ENST00000452065 EEA1Q15075 1411 aa18.63■□□□□ 0.57
HDLBP-224ENST00000452065 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
HDLBP-224ENST00000452065 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
HDLBP-224ENST00000452065 NUP160Q12769 1436 aa18.57■□□□□ 0.56
HDLBP-224ENST00000452065 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
HDLBP-224ENST00000452065 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
HDLBP-224ENST00000452065 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
HDLBP-224ENST00000452065 PRXQ9BXM0 1461 aa18.52■□□□□ 0.56
HDLBP-224ENST00000452065 KIAA0586Q9BVV6 1533 aa18.45■□□□□ 0.54
HDLBP-224ENST00000452065 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
HDLBP-224ENST00000452065 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms