RNA–Protein interactions for RNA: ENST00000451686.5

ITSN1-220, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 501 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-220ENST00000451686 NISCHQ9Y2I1 1504 aa54.21■■■■■ 6.27
ITSN1-220ENST00000451686 CCDC180Q9P1Z9 1646 aa48.48■■■■■ 5.35
ITSN1-220ENST00000451686 ABCC9O60706 1549 aa47.4■■■■■ 5.18
ITSN1-220ENST00000451686 RB1CC1Q8TDY2 1594 aa45.6■■■■■ 4.89
ITSN1-220ENST00000451686 NACADO15069 1562 aa45.51■■■■■ 4.88
ITSN1-220ENST00000451686 MYO15BQ96JP2 1530 aa45.24■■■■■ 4.83
ITSN1-220ENST00000451686 ZCCHC6Q5VYS8 1495 aaKnown RBP45.16■■■■■ 4.82
ITSN1-220ENST00000451686 DCAF1Q9Y4B6 1507 aa44.94■■■■■ 4.78
ITSN1-220ENST00000451686 DCAF8L2P0C7V8 631 aa44.91■■■■■ 4.78
ITSN1-220ENST00000451686 UNC13AQ9UPW8 1703 aa44.83■■■■■ 4.77
ITSN1-220ENST00000451686 BICRAQ9NZM4 1560 aa44.36■■■■■ 4.69
ITSN1-220ENST00000451686 PABPN1Q86U42 306 aaKnown RBP eCLIP44.1■■■■■ 4.65
ITSN1-220ENST00000451686 SCRIBQ14160 1630 aa44.02■■■■■ 4.64
ITSN1-220ENST00000451686 SHROOM4Q9ULL8 1493 aa43.83■■■■■ 4.61
ITSN1-220ENST00000451686 DNAJC5BQ9UF47 199 aa43.75■■■■■ 4.59
ITSN1-220ENST00000451686 EIF4G1Q04637 1599 aaKnown RBP43.12■■■■■ 4.49
ITSN1-220ENST00000451686 CC2D2AQ9P2K1 1620 aa43■■■■■ 4.47
ITSN1-220ENST00000451686 CECR2Q9BXF3 1484 aa42.64■■■■■ 4.42
ITSN1-220ENST00000451686 SMARCA4P51532 1647 aa42.18■■■■■ 4.34
ITSN1-220ENST00000451686 BAZ1AQ9NRL2 1556 aaPredicted RBP42.02■■■■■ 4.32
ITSN1-220ENST00000451686 NCAPD3P42695 1498 aa41.97■■■■■ 4.31
ITSN1-220ENST00000451686 ATAD2BQ9ULI0 1458 aa41.93■■■■■ 4.3
ITSN1-220ENST00000451686 SMARCA2P51531 1590 aa41.88■■■■■ 4.29
ITSN1-220ENST00000451686 PEG3Q9GZU2 1588 aa41.85■■■■■ 4.29
ITSN1-220ENST00000451686 HMGXB3Q12766 1538 aa41.81■■■■■ 4.28
ITSN1-220ENST00000451686 MROH2BQ7Z745 1585 aa41.76■■■■■ 4.28
ITSN1-220ENST00000451686 BAZ1BQ9UIG0 1483 aaKnown RBP41.51■■■■■ 4.24
ITSN1-220ENST00000451686 WIZO95785 1651 aa41.34■■■■■ 4.21
ITSN1-220ENST00000451686 RSF1Q96T23 1441 aaPredicted RBP41.14■■■■■ 4.18
ITSN1-220ENST00000451686 NESP48681 1621 aa41■■■■■ 4.15
ITSN1-220ENST00000451686 LAMC3Q9Y6N6 1575 aa40.95■■■■■ 4.15
ITSN1-220ENST00000451686 TOP2AP11388 1531 aaKnown RBP40.88■■■■■ 4.13
ITSN1-220ENST00000451686 ERCC6Q03468 1493 aa40.79■■■■■ 4.12
ITSN1-220ENST00000451686 KIF21AQ7Z4S6 1674 aa40.66■■■■■ 4.1
ITSN1-220ENST00000451686 CADPSQ9ULU8 1353 aa40.63■■■■■ 4.1
ITSN1-220ENST00000451686 CUX2O14529 1486 aa40.63■■■■■ 4.09
ITSN1-220ENST00000451686 THOC2Q8NI27 1593 aaKnown RBP40.61■■■■■ 4.09
ITSN1-220ENST00000451686 PDS5BQ9NTI5 1447 aa40.5■■■■■ 4.07
ITSN1-220ENST00000451686 CFTRP13569 1480 aa40.43■■■■■ 4.06
ITSN1-220ENST00000451686 PRDM2Q13029 1718 aa40.36■■■■■ 4.05
ITSN1-220ENST00000451686 CCDC88BA6NC98 1476 aa40.31■■■■■ 4.04
ITSN1-220ENST00000451686 FANCD2Q9BXW9 1451 aa40.19■■■■■ 4.03
ITSN1-220ENST00000451686 MRC2Q9UBG0 1479 aa40.19■■■■■ 4.03
ITSN1-220ENST00000451686 WDR62O43379 1518 aa40.17■■■■■ 4.02
ITSN1-220ENST00000451686 CEP164Q9UPV0 1460 aa40.17■■■■■ 4.02
ITSN1-220ENST00000451686 URB2Q14146 1524 aaKnown RBP39.89■■■■□ 3.98
ITSN1-220ENST00000451686 TOPBP1Q92547 1522 aa39.58■■■■□ 3.93
ITSN1-220ENST00000451686 SUPT5HO00267 1087 aaKnown RBP39.57■■■■□ 3.93
ITSN1-220ENST00000451686 DNAJC5Q9H3Z4 198 aa39.57■■■■□ 3.93
ITSN1-220ENST00000451686 DNMBPQ6XZF7 1577 aa39.55■■■■□ 3.92
ITSN1-220ENST00000451686 ABCC8Q09428 1581 aa39.51■■■■□ 3.92
ITSN1-220ENST00000451686 IFT140Q96RY7 1462 aa39.35■■■■□ 3.89
ITSN1-220ENST00000451686 TARBP1Q13395 1621 aaKnown RBP39.28■■■■□ 3.88
ITSN1-220ENST00000451686 POLA1P09884 1462 aaPredicted RBP39.22■■■■□ 3.87
ITSN1-220ENST00000451686 CUX1P39880 1505 aa39.21■■■■□ 3.87
ITSN1-220ENST00000451686 ZNF608Q9ULD9 1512 aaPredicted RBP39.21■■■■□ 3.87
ITSN1-220ENST00000451686 EIF4G3O43432 1585 aaKnown RBP39.15■■■■□ 3.86
ITSN1-220ENST00000451686 FGD5Q6ZNL6 1462 aa39.06■■■■□ 3.84
ITSN1-220ENST00000451686 WDR97A6NE52 1622 aa39■■■■□ 3.83
ITSN1-220ENST00000451686 RAD54L2Q9Y4B4 1467 aa38.98■■■■□ 3.83
ITSN1-220ENST00000451686 SOGA1O94964 1423 aa38.93■■■■□ 3.82
ITSN1-220ENST00000451686 BIVM-ERCC5R4GMW8 1640 aa38.91■■■■□ 3.82
ITSN1-220ENST00000451686 AQRO60306 1485 aaKnown RBP eCLIP38.88■■■■□ 3.81
ITSN1-220ENST00000451686 TOP2BQ02880 1626 aa38.83■■■■□ 3.81
ITSN1-220ENST00000451686 SYNJ1O43426 1573 aa38.8■■■■□ 3.8
ITSN1-220ENST00000451686 CHD1O14646 1710 aa38.76■■■■□ 3.8
ITSN1-220ENST00000451686 WRNQ14191 1432 aaPredicted RBP eCLIP38.74■■■■□ 3.79
ITSN1-220ENST00000451686 ABCA10Q8WWZ4 1543 aa38.72■■■■□ 3.79
ITSN1-220ENST00000451686 TDRD9Q8NDG6 1382 aaKnown RBP38.71■■■■□ 3.79
ITSN1-220ENST00000451686 ABCA5Q8WWZ7 1642 aa38.69■■■■□ 3.78
ITSN1-220ENST00000451686 OSCARQ8IYS5 282 aa38.67■■■■□ 3.78
ITSN1-220ENST00000451686 PBRM1Q86U86 1689 aa38.67■■■■□ 3.78
ITSN1-220ENST00000451686 GRIN2BQ13224 1484 aa38.57■■■■□ 3.76
ITSN1-220ENST00000451686 SNAPC4Q5SXM2 1469 aa38.57■■■■□ 3.76
ITSN1-220ENST00000451686 MAGI1Q96QZ7 1491 aaPredicted RBP38.55■■■■□ 3.76
ITSN1-220ENST00000451686 GAPVD1Q14C86 1478 aa38.53■■■■□ 3.76
ITSN1-220ENST00000451686 SYNJ2O15056 1496 aa38.38■■■■□ 3.73
ITSN1-220ENST00000451686 RIMBP3CA6NJZ7 1639 aa38.36■■■■□ 3.73
ITSN1-220ENST00000451686 RIMBP3BA6NNM3 1639 aa38.36■■■■□ 3.73
ITSN1-220ENST00000451686 RIMBP3Q9UFD9 1639 aa38.36■■■■□ 3.73
ITSN1-220ENST00000451686 CLASP1Q7Z460 1538 aa38.32■■■■□ 3.72
ITSN1-220ENST00000451686 ADAMTS12P58397 1594 aa38.3■■■■□ 3.72
ITSN1-220ENST00000451686 ARHGEF11O15085 1522 aa38.28■■■■□ 3.72
ITSN1-220ENST00000451686 ERICH3Q5RHP9 1530 aa38.25■■■■□ 3.71
ITSN1-220ENST00000451686 FBLN2P98095 1184 aa38.22■■■■□ 3.71
ITSN1-220ENST00000451686 CHMP7Q8WUX9 453 aaPredicted RBP38.15■■■■□ 3.7
ITSN1-220ENST00000451686 GRIN2AQ12879 1464 aa38.12■■■■□ 3.69
ITSN1-220ENST00000451686 FHAD1B1AJZ9 1412 aa38.08■■■■□ 3.69
ITSN1-220ENST00000451686 CEP170Q5SW79 1584 aa38.02■■■■□ 3.68
ITSN1-220ENST00000451686 NUP160Q12769 1436 aa38.01■■■■□ 3.68
ITSN1-220ENST00000451686 TRIM41Q8WV44 630 aa37.96■■■■□ 3.67
ITSN1-220ENST00000451686 ARAP1Q96P48 1450 aa37.96■■■■□ 3.67
ITSN1-220ENST00000451686 KIF27Q86VH2 1401 aa37.92■■■■□ 3.66
ITSN1-220ENST00000451686 CUL7Q14999 1698 aa37.89■■■■□ 3.66
ITSN1-220ENST00000451686 SHROOM2Q13796 1616 aa37.87■■■■□ 3.65
ITSN1-220ENST00000451686 IGF1RP08069 1367 aa37.82■■■■□ 3.65
ITSN1-220ENST00000451686 RUSC2Q8N2Y8 1516 aa37.76■■■■□ 3.63
ITSN1-220ENST00000451686 ERCC6L2Q5T890 1561 aa37.71■■■■□ 3.63
ITSN1-220ENST00000451686 CYB5RLQ6IPT4 315 aa37.67■■■■□ 3.62
ITSN1-220ENST00000451686 CARMIL1Q5VZK9 1371 aa37.55■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms