RNA–Protein interactions for RNA: ENST00000451493.5

SPART-203, Transcript of spartin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPART, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-203ENST00000451493 NISCHQ9Y2I1 1504 aa20.92■□□□□ 0.94
SPART-203ENST00000451493 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
SPART-203ENST00000451493 PELP1Q8IZL8 1130 aaKnown RBP20.23■□□□□ 0.83
SPART-203ENST00000451493 PCGF6Q9BYE7 350 aa20.07■□□□□ 0.8
SPART-203ENST00000451493 HRCP23327 699 aa19.99■□□□□ 0.79
SPART-203ENST00000451493 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
SPART-203ENST00000451493 MYT1Q01538 1121 aa19.74■□□□□ 0.75
SPART-203ENST00000451493 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
SPART-203ENST00000451493 PPARGC1BQ86YN6 1023 aaKnown RBP19.62■□□□□ 0.73
SPART-203ENST00000451493 ZEB1P37275 1124 aaPredicted RBP19.44■□□□□ 0.7
SPART-203ENST00000451493 CENPBP07199 599 aaPredicted RBP19.32■□□□□ 0.68
SPART-203ENST00000451493 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
SPART-203ENST00000451493 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
SPART-203ENST00000451493 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
SPART-203ENST00000451493 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
SPART-203ENST00000451493 LOC105371045A0A1W2PR82 267 aa18.92■□□□□ 0.62
SPART-203ENST00000451493 FAM9AQ8IZU1 332 aaPredicted RBP18.92■□□□□ 0.62
SPART-203ENST00000451493 YTHDC1Q96MU7 727 aaKnown RBP18.86■□□□□ 0.61
SPART-203ENST00000451493 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
SPART-203ENST00000451493 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
SPART-203ENST00000451493 TTBK1Q5TCY1 1321 aaPredicted RBP18.71■□□□□ 0.59
SPART-203ENST00000451493 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.59
SPART-203ENST00000451493 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
SPART-203ENST00000451493 DIEXFQ68CQ4 756 aaKnown RBP18.61■□□□□ 0.57
SPART-203ENST00000451493 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
SPART-203ENST00000451493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
SPART-203ENST00000451493 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
SPART-203ENST00000451493 MYO15BQ96JP2 1530 aa18.45■□□□□ 0.54
SPART-203ENST00000451493 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
SPART-203ENST00000451493 APLP2Q06481 763 aa18.27■□□□□ 0.52
SPART-203ENST00000451493 NEFLP07196 543 aa18.2■□□□□ 0.5
SPART-203ENST00000451493 CCDC180Q9P1Z9 1646 aa18.11■□□□□ 0.49
SPART-203ENST00000451493 ZNF316A6NFI3 1004 aaPredicted RBP18.11■□□□□ 0.49
SPART-203ENST00000451493 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.47
SPART-203ENST00000451493 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
SPART-203ENST00000451493 BCANQ96GW7 911 aa17.94■□□□□ 0.46
SPART-203ENST00000451493 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
SPART-203ENST00000451493 ANP32EQ9BTT0 268 aa17.83■□□□□ 0.45
SPART-203ENST00000451493 BCL11AQ9H165 835 aa17.82■□□□□ 0.44
SPART-203ENST00000451493 CLSPNQ9HAW4 1339 aa17.82■□□□□ 0.44
SPART-203ENST00000451493 MIER1Q8N108 512 aa17.79■□□□□ 0.44
SPART-203ENST00000451493 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
SPART-203ENST00000451493 FKBP8Q14318 412 aa17.6■□□□□ 0.41
SPART-203ENST00000451493 RTL5Q5HYW3 569 aaPredicted RBP17.58■□□□□ 0.4
SPART-203ENST00000451493 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
SPART-203ENST00000451493 SUPT16HQ9Y5B9 1047 aaKnown RBP17.54■□□□□ 0.4
SPART-203ENST00000451493 ITGAEP38570 1179 aa17.53■□□□□ 0.4
SPART-203ENST00000451493 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
SPART-203ENST00000451493 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
SPART-203ENST00000451493 TSHZ2Q9NRE2 1034 aa17.39■□□□□ 0.37
SPART-203ENST00000451493 ANP32CO43423 234 aa17.35■□□□□ 0.37
SPART-203ENST00000451493 ATP1B4Q9UN42 357 aaPredicted RBP17.31■□□□□ 0.36
SPART-203ENST00000451493 DAXXQ9UER7 740 aaPredicted RBP17.26■□□□□ 0.35
SPART-203ENST00000451493 NBR1Q14596 966 aa17.25■□□□□ 0.35
SPART-203ENST00000451493 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
SPART-203ENST00000451493 RBM19Q9Y4C8 960 aaKnown RBP17.22■□□□□ 0.35
SPART-203ENST00000451493 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.34
SPART-203ENST00000451493 ANP32AP39687 249 aaKnown RBP17.18■□□□□ 0.34
SPART-203ENST00000451493 EIF5BO60841 1220 aaKnown RBP17.16■□□□□ 0.34
SPART-203ENST00000451493 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
SPART-203ENST00000451493 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
SPART-203ENST00000451493 CEP162Q5TB80 1403 aa17.11■□□□□ 0.33
SPART-203ENST00000451493 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPART-203ENST00000451493 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
SPART-203ENST00000451493 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
SPART-203ENST00000451493 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
SPART-203ENST00000451493 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
SPART-203ENST00000451493 NPM2Q86SE8 214 aaKnown RBP17.02■□□□□ 0.31
SPART-203ENST00000451493 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
SPART-203ENST00000451493 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
SPART-203ENST00000451493 HIRIP3Q9BW71 556 aaPredicted RBP16.92■□□□□ 0.3
SPART-203ENST00000451493 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
SPART-203ENST00000451493 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
SPART-203ENST00000451493 PRKCSHP14314 528 aaPredicted RBP16.89■□□□□ 0.3
SPART-203ENST00000451493 SCRIBQ14160 1630 aa16.89■□□□□ 0.29
SPART-203ENST00000451493 CLIP1P30622 1438 aa16.85■□□□□ 0.29
SPART-203ENST00000451493 FAM9BQ8IZU0 186 aa16.85■□□□□ 0.29
SPART-203ENST00000451493 CCDC136Q96JN2 1154 aa16.85■□□□□ 0.29
SPART-203ENST00000451493 RB1CC1Q8TDY2 1594 aa16.83■□□□□ 0.28
SPART-203ENST00000451493 PPP4R2Q9NY27 417 aa16.81■□□□□ 0.28
SPART-203ENST00000451493 GLIPR1L2Q4G1C9 344 aa16.81■□□□□ 0.28
SPART-203ENST00000451493 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
SPART-203ENST00000451493 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
SPART-203ENST00000451493 TONSLQ96HA7 1378 aa16.78■□□□□ 0.28
SPART-203ENST00000451493 EEA1Q15075 1411 aa16.74■□□□□ 0.27
SPART-203ENST00000451493 B4GALNT3Q6L9W6 998 aa16.74■□□□□ 0.27
SPART-203ENST00000451493 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
SPART-203ENST00000451493 WRNQ14191 1432 aaPredicted RBP eCLIP16.73■□□□□ 0.27
SPART-203ENST00000451493 FANCIQ9NVI1 1328 aa16.73■□□□□ 0.27
SPART-203ENST00000451493 ABCC9O60706 1549 aa16.72■□□□□ 0.27
SPART-203ENST00000451493 CCER2I3L3R5 266 aa16.71■□□□□ 0.27
SPART-203ENST00000451493 MRS2Q9HD23 443 aa16.7■□□□□ 0.26
SPART-203ENST00000451493 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
SPART-203ENST00000451493 NEFMP07197 916 aa16.69■□□□□ 0.26
SPART-203ENST00000451493 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
SPART-203ENST00000451493 SOGA1O94964 1423 aa16.65■□□□□ 0.26
SPART-203ENST00000451493 SIN3AQ96ST3 1273 aa16.64■□□□□ 0.25
SPART-203ENST00000451493 ANO8Q9HCE9 1232 aaPredicted RBP16.64■□□□□ 0.25
SPART-203ENST00000451493 PPM1GO15355 546 aaPredicted RBP16.61■□□□□ 0.25
SPART-203ENST00000451493 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms