RNA–Protein interactions for RNA: ENST00000451030.5

NUP214-203, Transcript of nucleoporin 214, humanhuman

TSL 1 (best) BASIC

Gene NUP214, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-203ENST00000451030 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
NUP214-203ENST00000451030 PELP1Q8IZL8 1130 aaKnown RBP17.88■□□□□ 0.45
NUP214-203ENST00000451030 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
NUP214-203ENST00000451030 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
NUP214-203ENST00000451030 MYT1Q01538 1121 aa17.35■□□□□ 0.37
NUP214-203ENST00000451030 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
NUP214-203ENST00000451030 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
NUP214-203ENST00000451030 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
NUP214-203ENST00000451030 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
NUP214-203ENST00000451030 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
NUP214-203ENST00000451030 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
NUP214-203ENST00000451030 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
NUP214-203ENST00000451030 APLP2Q06481 763 aa16.86■□□□□ 0.29
NUP214-203ENST00000451030 NEFLP07196 543 aa16.6■□□□□ 0.25
NUP214-203ENST00000451030 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
NUP214-203ENST00000451030 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
NUP214-203ENST00000451030 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
NUP214-203ENST00000451030 HRCP23327 699 aa16.25■□□□□ 0.19
NUP214-203ENST00000451030 DAXXQ9UER7 740 aaPredicted RBP16.16■□□□□ 0.18
NUP214-203ENST00000451030 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
NUP214-203ENST00000451030 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
NUP214-203ENST00000451030 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
NUP214-203ENST00000451030 RTL5Q5HYW3 569 aaPredicted RBP15.99■□□□□ 0.15
NUP214-203ENST00000451030 UBTFP17480 764 aaKnown RBP15.98■□□□□ 0.15
NUP214-203ENST00000451030 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
NUP214-203ENST00000451030 ATP1B4Q9UN42 357 aaPredicted RBP15.92■□□□□ 0.14
NUP214-203ENST00000451030 PPARGC1BQ86YN6 1023 aaKnown RBP15.8■□□□□ 0.12
NUP214-203ENST00000451030 DIEXFQ68CQ4 756 aaKnown RBP15.76■□□□□ 0.11
NUP214-203ENST00000451030 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
NUP214-203ENST00000451030 GTF3C3Q9Y5Q9 886 aa15.67■□□□□ 0.1
NUP214-203ENST00000451030 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
NUP214-203ENST00000451030 POLR3GLQ9BT43 218 aa15.61■□□□□ 0.09
NUP214-203ENST00000451030 CLSPNQ9HAW4 1339 aa15.6■□□□□ 0.09
NUP214-203ENST00000451030 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
NUP214-203ENST00000451030 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
NUP214-203ENST00000451030 ITGAEP38570 1179 aa15.54■□□□□ 0.08
NUP214-203ENST00000451030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
NUP214-203ENST00000451030 BCANQ96GW7 911 aa15.48■□□□□ 0.07
NUP214-203ENST00000451030 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
NUP214-203ENST00000451030 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
NUP214-203ENST00000451030 EIF5BO60841 1220 aaKnown RBP15.34■□□□□ 0.05
NUP214-203ENST00000451030 MYT1LQ9UL68 1186 aa15.34■□□□□ 0.05
NUP214-203ENST00000451030 GLIPR1L2Q4G1C9 344 aa15.34■□□□□ 0.05
NUP214-203ENST00000451030 ANP32AP39687 249 aaKnown RBP15.32■□□□□ 0.04
NUP214-203ENST00000451030 ANP32CO43423 234 aa15.32■□□□□ 0.04
NUP214-203ENST00000451030 DCAF1Q9Y4B6 1507 aa15.31■□□□□ 0.04
NUP214-203ENST00000451030 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
NUP214-203ENST00000451030 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
NUP214-203ENST00000451030 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
NUP214-203ENST00000451030 ANP32BQ92688 251 aaKnown RBP15.13■□□□□ 0.01
NUP214-203ENST00000451030 NEUROD1Q13562 356 aa15.13■□□□□ 0.01
NUP214-203ENST00000451030 FAM50AQ14320 339 aaKnown RBP15.09■□□□□ 0.01
NUP214-203ENST00000451030 NPM2Q86SE8 214 aaKnown RBP15.07■□□□□ 0
NUP214-203ENST00000451030 TRIM52Q96A61 297 aa15.06■□□□□ 0
NUP214-203ENST00000451030 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
NUP214-203ENST00000451030 FKBP8Q14318 412 aa15.05■□□□□ 0
NUP214-203ENST00000451030 CANXP27824 592 aaKnown RBP15.04■□□□□ -0
NUP214-203ENST00000451030 UPF2Q9HAU5 1272 aaKnown RBP14.92□□□□□ -0.02
NUP214-203ENST00000451030 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
NUP214-203ENST00000451030 NBR1Q14596 966 aa14.92□□□□□ -0.02
NUP214-203ENST00000451030 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
NUP214-203ENST00000451030 ZNF326Q5BKZ1 582 aaKnown RBP14.91□□□□□ -0.02
NUP214-203ENST00000451030 HSP90AA1P07900 732 aaKnown RBP14.9□□□□□ -0.02
NUP214-203ENST00000451030 ABCC9O60706 1549 aa14.9□□□□□ -0.02
NUP214-203ENST00000451030 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
NUP214-203ENST00000451030 NEFMP07197 916 aa14.85□□□□□ -0.03
NUP214-203ENST00000451030 HNRNPUQ00839 825 aaKnown RBP eCLIP14.84□□□□□ -0.03
NUP214-203ENST00000451030 ANP32EQ9BTT0 268 aa14.83□□□□□ -0.04
NUP214-203ENST00000451030 BCL11AQ9H165 835 aa14.83□□□□□ -0.04
NUP214-203ENST00000451030 CCDC136Q96JN2 1154 aa14.82□□□□□ -0.04
NUP214-203ENST00000451030 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
NUP214-203ENST00000451030 TNNT2P45379 298 aaPredicted RBP14.73□□□□□ -0.05
NUP214-203ENST00000451030 DDX10Q13206 875 aaKnown RBP14.71□□□□□ -0.05
NUP214-203ENST00000451030 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.71□□□□□ -0.06
NUP214-203ENST00000451030 ARXQ96QS3 562 aa14.7□□□□□ -0.06
NUP214-203ENST00000451030 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
NUP214-203ENST00000451030 PABPN1Q86U42 306 aaKnown RBP eCLIP14.69□□□□□ -0.06
NUP214-203ENST00000451030 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
NUP214-203ENST00000451030 ERICH6BQ5W0A0 696 aa14.68□□□□□ -0.06
NUP214-203ENST00000451030 TRIM44Q96DX7 344 aaPredicted RBP14.68□□□□□ -0.06
NUP214-203ENST00000451030 SLC24A1O60721 1099 aa14.67□□□□□ -0.06
NUP214-203ENST00000451030 TONSLQ96HA7 1378 aa14.66□□□□□ -0.06
NUP214-203ENST00000451030 EEA1Q15075 1411 aa14.65□□□□□ -0.06
NUP214-203ENST00000451030 MIER1Q8N108 512 aa14.63□□□□□ -0.07
NUP214-203ENST00000451030 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
NUP214-203ENST00000451030 BECN1Q14457 450 aa14.61□□□□□ -0.07
NUP214-203ENST00000451030 PPM1GO15355 546 aaPredicted RBP14.6□□□□□ -0.07
NUP214-203ENST00000451030 TMC1Q8TDI8 760 aa14.6□□□□□ -0.07
NUP214-203ENST00000451030 MRS2Q9HD23 443 aa14.56□□□□□ -0.08
NUP214-203ENST00000451030 GOLGA6L22H0YM25 854 aa14.55□□□□□ -0.08
NUP214-203ENST00000451030 IRX6P78412 446 aaPredicted RBP14.54□□□□□ -0.08
NUP214-203ENST00000451030 SALL2Q9Y467 1007 aaPredicted RBP14.54□□□□□ -0.08
NUP214-203ENST00000451030 GOLGA3Q08378 1498 aa14.53□□□□□ -0.08
NUP214-203ENST00000451030 CEP162Q5TB80 1403 aa14.52□□□□□ -0.08
NUP214-203ENST00000451030 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.09
NUP214-203ENST00000451030 CLIP1P30622 1438 aa14.51□□□□□ -0.09
NUP214-203ENST00000451030 NAP1L5Q96NT1 182 aaPredicted RBP14.51□□□□□ -0.09
NUP214-203ENST00000451030 NCLP19338 710 aaKnown RBP14.5□□□□□ -0.09
NUP214-203ENST00000451030 TNIKQ9UKE5 1360 aa14.49□□□□□ -0.09
NUP214-203ENST00000451030 WDR43Q15061 677 aaKnown RBP eCLIP14.47□□□□□ -0.092e-8■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms