RNA–Protein interactions for RNA: ENST00000450643.5

RHBDF1-206, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-206ENST00000450643 NISCHQ9Y2I1 1504 aa40.56■■■■■ 4.08
RHBDF1-206ENST00000450643 CCDC180Q9P1Z9 1646 aa35.96■■■■□ 3.35
RHBDF1-206ENST00000450643 ABCC9O60706 1549 aa34.76■■■■□ 3.16
RHBDF1-206ENST00000450643 ZCCHC6Q5VYS8 1495 aaKnown RBP33.88■■■■□ 3.01
RHBDF1-206ENST00000450643 DCAF8L2P0C7V8 631 aa33.78■■■■□ 3
RHBDF1-206ENST00000450643 NACADO15069 1562 aa33.64■■■□□ 2.98
RHBDF1-206ENST00000450643 RB1CC1Q8TDY2 1594 aa33.63■■■□□ 2.97
RHBDF1-206ENST00000450643 DCAF1Q9Y4B6 1507 aa33.53■■■□□ 2.96
RHBDF1-206ENST00000450643 MYO15BQ96JP2 1530 aa33.49■■■□□ 2.95
RHBDF1-206ENST00000450643 UNC13AQ9UPW8 1703 aa32.95■■■□□ 2.87
RHBDF1-206ENST00000450643 SCRIBQ14160 1630 aa32.89■■■□□ 2.86
RHBDF1-206ENST00000450643 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
RHBDF1-206ENST00000450643 PABPN1Q86U42 306 aaKnown RBP eCLIP32.5■■■□□ 2.79
RHBDF1-206ENST00000450643 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
RHBDF1-206ENST00000450643 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
RHBDF1-206ENST00000450643 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
RHBDF1-206ENST00000450643 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
RHBDF1-206ENST00000450643 BAZ1AQ9NRL2 1556 aaPredicted RBP31.45■■■□□ 2.63
RHBDF1-206ENST00000450643 SMARCA4P51532 1647 aa31.45■■■□□ 2.62
RHBDF1-206ENST00000450643 DNAJC5BQ9UF47 199 aa31.38■■■□□ 2.61
RHBDF1-206ENST00000450643 MROH2BQ7Z745 1585 aa31.28■■■□□ 2.6
RHBDF1-206ENST00000450643 SMARCA2P51531 1590 aa31.13■■■□□ 2.57
RHBDF1-206ENST00000450643 ATAD2BQ9ULI0 1458 aa31.08■■■□□ 2.57
RHBDF1-206ENST00000450643 PEG3Q9GZU2 1588 aa31.05■■■□□ 2.56
RHBDF1-206ENST00000450643 WIZO95785 1651 aa31.04■■■□□ 2.56
RHBDF1-206ENST00000450643 RSF1Q96T23 1441 aaPredicted RBP31.03■■■□□ 2.56
RHBDF1-206ENST00000450643 NCAPD3P42695 1498 aa30.96■■■□□ 2.55
RHBDF1-206ENST00000450643 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
RHBDF1-206ENST00000450643 BAZ1BQ9UIG0 1483 aaKnown RBP30.93■■■□□ 2.54
RHBDF1-206ENST00000450643 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
RHBDF1-206ENST00000450643 SUPT5HO00267 1087 aaKnown RBP30.66■■■□□ 2.5
RHBDF1-206ENST00000450643 CCDC88BA6NC98 1476 aa30.29■■■□□ 2.44
RHBDF1-206ENST00000450643 NESP48681 1621 aa30.19■■■□□ 2.42
RHBDF1-206ENST00000450643 LAMC3Q9Y6N6 1575 aa30.18■■■□□ 2.42
RHBDF1-206ENST00000450643 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
RHBDF1-206ENST00000450643 PRDM2Q13029 1718 aa30.03■■■□□ 2.4
RHBDF1-206ENST00000450643 CFTRP13569 1480 aa30.02■■■□□ 2.4
RHBDF1-206ENST00000450643 ERCC6Q03468 1493 aa29.97■■■□□ 2.39
RHBDF1-206ENST00000450643 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.38
RHBDF1-206ENST00000450643 PDS5BQ9NTI5 1447 aa29.92■■■□□ 2.38
RHBDF1-206ENST00000450643 FANCD2Q9BXW9 1451 aa29.83■■■□□ 2.37
RHBDF1-206ENST00000450643 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
RHBDF1-206ENST00000450643 THOC2Q8NI27 1593 aaKnown RBP29.67■■■□□ 2.34
RHBDF1-206ENST00000450643 MRC2Q9UBG0 1479 aa29.62■■■□□ 2.33
RHBDF1-206ENST00000450643 WDR62O43379 1518 aa29.5■■■□□ 2.31
RHBDF1-206ENST00000450643 URB2Q14146 1524 aaKnown RBP29.5■■■□□ 2.31
RHBDF1-206ENST00000450643 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
RHBDF1-206ENST00000450643 CUX2O14529 1486 aa29.42■■■□□ 2.3
RHBDF1-206ENST00000450643 ABCC8Q09428 1581 aa29.4■■■□□ 2.3
RHBDF1-206ENST00000450643 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
RHBDF1-206ENST00000450643 CUX1P39880 1505 aa29.34■■■□□ 2.29
RHBDF1-206ENST00000450643 WRNQ14191 1432 aaPredicted RBP eCLIP29.3■■■□□ 2.28
RHBDF1-206ENST00000450643 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
RHBDF1-206ENST00000450643 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
RHBDF1-206ENST00000450643 TOP2BQ02880 1626 aa29.22■■■□□ 2.27
RHBDF1-206ENST00000450643 FGD5Q6ZNL6 1462 aa29.19■■■□□ 2.26
RHBDF1-206ENST00000450643 POLA1P09884 1462 aaPredicted RBP29.17■■■□□ 2.26
RHBDF1-206ENST00000450643 IFT140Q96RY7 1462 aa29.1■■■□□ 2.25
RHBDF1-206ENST00000450643 TARBP1Q13395 1621 aaKnown RBP29.05■■■□□ 2.24
RHBDF1-206ENST00000450643 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
RHBDF1-206ENST00000450643 SOGA1O94964 1423 aa29.04■■■□□ 2.24
RHBDF1-206ENST00000450643 WDR97A6NE52 1622 aa28.98■■■□□ 2.23
RHBDF1-206ENST00000450643 ZNF608Q9ULD9 1512 aaPredicted RBP28.93■■■□□ 2.22
RHBDF1-206ENST00000450643 EIF4G3O43432 1585 aaKnown RBP28.92■■■□□ 2.22
RHBDF1-206ENST00000450643 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
RHBDF1-206ENST00000450643 ABCA10Q8WWZ4 1543 aa28.88■■■□□ 2.21
RHBDF1-206ENST00000450643 TDRD9Q8NDG6 1382 aaKnown RBP28.83■■■□□ 2.21
RHBDF1-206ENST00000450643 AQRO60306 1485 aaKnown RBP eCLIP28.81■■■□□ 2.24e-7■■■■■ 57.7
RHBDF1-206ENST00000450643 ABCA5Q8WWZ7 1642 aa28.79■■■□□ 2.2
RHBDF1-206ENST00000450643 PBRM1Q86U86 1689 aa28.77■■■□□ 2.2
RHBDF1-206ENST00000450643 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
RHBDF1-206ENST00000450643 GAPVD1Q14C86 1478 aa28.73■■■□□ 2.19
RHBDF1-206ENST00000450643 GRIN2BQ13224 1484 aa28.67■■■□□ 2.18
RHBDF1-206ENST00000450643 KIF27Q86VH2 1401 aa28.65■■■□□ 2.18
RHBDF1-206ENST00000450643 SNAPC4Q5SXM2 1469 aa28.6■■■□□ 2.17
RHBDF1-206ENST00000450643 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
RHBDF1-206ENST00000450643 MAGI1Q96QZ7 1491 aaPredicted RBP28.55■■■□□ 2.16
RHBDF1-206ENST00000450643 CHD1O14646 1710 aa28.52■■■□□ 2.16
RHBDF1-206ENST00000450643 RUSC2Q8N2Y8 1516 aa28.52■■■□□ 2.16
RHBDF1-206ENST00000450643 ADAMTS12P58397 1594 aa28.5■■■□□ 2.15
RHBDF1-206ENST00000450643 CUL7Q14999 1698 aa28.46■■■□□ 2.15
RHBDF1-206ENST00000450643 FBLN2P98095 1184 aa28.44■■■□□ 2.14
RHBDF1-206ENST00000450643 SYNJ2O15056 1496 aa28.43■■■□□ 2.14
RHBDF1-206ENST00000450643 IGF1RP08069 1367 aa28.4■■■□□ 2.14
RHBDF1-206ENST00000450643 FHAD1B1AJZ9 1412 aa28.4■■■□□ 2.14
RHBDF1-206ENST00000450643 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
RHBDF1-206ENST00000450643 EEA1Q15075 1411 aa28.37■■■□□ 2.13
RHBDF1-206ENST00000450643 FAM9AQ8IZU1 332 aaPredicted RBP28.35■■■□□ 2.13
RHBDF1-206ENST00000450643 GRIN2AQ12879 1464 aa28.31■■■□□ 2.12
RHBDF1-206ENST00000450643 CARMIL1Q5VZK9 1371 aa28.29■■■□□ 2.12
RHBDF1-206ENST00000450643 CSRNP3Q8WYN3 585 aa28.24■■■□□ 2.11
RHBDF1-206ENST00000450643 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
RHBDF1-206ENST00000450643 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
RHBDF1-206ENST00000450643 CEP170Q5SW79 1584 aa28.18■■■□□ 2.1
RHBDF1-206ENST00000450643 PRXQ9BXM0 1461 aa28.16■■■□□ 2.1
RHBDF1-206ENST00000450643 KIF21BO75037 1637 aa28.11■■■□□ 2.09
RHBDF1-206ENST00000450643 NUP160Q12769 1436 aa28.11■■■□□ 2.09
RHBDF1-206ENST00000450643 CLASP1Q7Z460 1538 aa28.1■■■□□ 2.09
RHBDF1-206ENST00000450643 CTTNBP2Q8WZ74 1663 aa28.06■■■□□ 2.08
RHBDF1-206ENST00000450643 EHMT2Q96KQ7 1210 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms