RNA–Protein interactions for RNA: ENST00000450444.5

TNS3-207, Transcript of tensin 3, humanhuman

TSL 5

Gene TNS3, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-207ENST00000450444 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
TNS3-207ENST00000450444 CCDC180Q9P1Z9 1646 aa25.93■■□□□ 1.74
TNS3-207ENST00000450444 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
TNS3-207ENST00000450444 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
TNS3-207ENST00000450444 ABCC9O60706 1549 aa24.54■■□□□ 1.52
TNS3-207ENST00000450444 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
TNS3-207ENST00000450444 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
TNS3-207ENST00000450444 NACADO15069 1562 aa24.15■■□□□ 1.46
TNS3-207ENST00000450444 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
TNS3-207ENST00000450444 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
TNS3-207ENST00000450444 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
TNS3-207ENST00000450444 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
TNS3-207ENST00000450444 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
TNS3-207ENST00000450444 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
TNS3-207ENST00000450444 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
TNS3-207ENST00000450444 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.28
TNS3-207ENST00000450444 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
TNS3-207ENST00000450444 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
TNS3-207ENST00000450444 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
TNS3-207ENST00000450444 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.25
TNS3-207ENST00000450444 SMARCA4P51532 1647 aa22.81■■□□□ 1.24
TNS3-207ENST00000450444 WIZO95785 1651 aa22.69■■□□□ 1.22
TNS3-207ENST00000450444 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
TNS3-207ENST00000450444 EIF4G1Q04637 1599 aaKnown RBP22.53■■□□□ 1.2
TNS3-207ENST00000450444 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
TNS3-207ENST00000450444 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
TNS3-207ENST00000450444 ATAD2BQ9ULI0 1458 aa22.45■■□□□ 1.18
TNS3-207ENST00000450444 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
TNS3-207ENST00000450444 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
TNS3-207ENST00000450444 HMGXB3Q12766 1538 aa22.27■■□□□ 1.15
TNS3-207ENST00000450444 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
TNS3-207ENST00000450444 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
TNS3-207ENST00000450444 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
TNS3-207ENST00000450444 CFTRP13569 1480 aa21.76■■□□□ 1.07
TNS3-207ENST00000450444 TRIM41Q8WV44 630 aa21.74■■□□□ 1.07
TNS3-207ENST00000450444 ABCC8Q09428 1581 aa21.72■■□□□ 1.07
TNS3-207ENST00000450444 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
TNS3-207ENST00000450444 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
TNS3-207ENST00000450444 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
TNS3-207ENST00000450444 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
TNS3-207ENST00000450444 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
TNS3-207ENST00000450444 NESP48681 1621 aa21.49■■□□□ 1.03
TNS3-207ENST00000450444 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
TNS3-207ENST00000450444 BIVM-ERCC5R4GMW8 1640 aa21.45■■□□□ 1.03
TNS3-207ENST00000450444 FANCD2Q9BXW9 1451 aa21.44■■□□□ 1.02
TNS3-207ENST00000450444 CUX1P39880 1505 aa21.41■■□□□ 1.02
TNS3-207ENST00000450444 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
TNS3-207ENST00000450444 CEP164Q9UPV0 1460 aa21.33■■□□□ 1.01
TNS3-207ENST00000450444 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
TNS3-207ENST00000450444 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
TNS3-207ENST00000450444 EEA1Q15075 1411 aa21.3■■□□□ 1
TNS3-207ENST00000450444 SOGA1O94964 1423 aa21.28■■□□□ 1
TNS3-207ENST00000450444 DNMBPQ6XZF7 1577 aa21.27■□□□□ 0.99
TNS3-207ENST00000450444 KIF21AQ7Z4S6 1674 aa21.26■□□□□ 0.99
TNS3-207ENST00000450444 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
TNS3-207ENST00000450444 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
TNS3-207ENST00000450444 LOC105371045A0A1W2PR82 267 aa21.2■□□□□ 0.98
TNS3-207ENST00000450444 FGD5Q6ZNL6 1462 aa21.19■□□□□ 0.98
TNS3-207ENST00000450444 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
TNS3-207ENST00000450444 ERCC6Q03468 1493 aa21.18■□□□□ 0.98
TNS3-207ENST00000450444 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
TNS3-207ENST00000450444 CUX2O14529 1486 aa21.1■□□□□ 0.97
TNS3-207ENST00000450444 POLA1P09884 1462 aaPredicted RBP21.1■□□□□ 0.97
TNS3-207ENST00000450444 MRC2Q9UBG0 1479 aa21.1■□□□□ 0.97
TNS3-207ENST00000450444 KIF27Q86VH2 1401 aa21.08■□□□□ 0.96
TNS3-207ENST00000450444 KIF21BO75037 1637 aa21.02■□□□□ 0.95
TNS3-207ENST00000450444 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.95
TNS3-207ENST00000450444 WDR62O43379 1518 aa21■□□□□ 0.95
TNS3-207ENST00000450444 RAD54L2Q9Y4B4 1467 aa21■□□□□ 0.95
TNS3-207ENST00000450444 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
TNS3-207ENST00000450444 EHMT2Q96KQ7 1210 aa20.97■□□□□ 0.95
TNS3-207ENST00000450444 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
TNS3-207ENST00000450444 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
TNS3-207ENST00000450444 PRXQ9BXM0 1461 aa20.93■□□□□ 0.94
TNS3-207ENST00000450444 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
TNS3-207ENST00000450444 HRCP23327 699 aa20.9■□□□□ 0.94
TNS3-207ENST00000450444 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.94
TNS3-207ENST00000450444 TNIKQ9UKE5 1360 aa20.89■□□□□ 0.93
TNS3-207ENST00000450444 IGF1RP08069 1367 aa20.88■□□□□ 0.93
TNS3-207ENST00000450444 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
TNS3-207ENST00000450444 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
TNS3-207ENST00000450444 IFT140Q96RY7 1462 aa20.83■□□□□ 0.93
TNS3-207ENST00000450444 UBTFP17480 764 aaKnown RBP20.83■□□□□ 0.92
TNS3-207ENST00000450444 PCGF6Q9BYE7 350 aa20.83■□□□□ 0.92
TNS3-207ENST00000450444 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
TNS3-207ENST00000450444 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
TNS3-207ENST00000450444 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
TNS3-207ENST00000450444 CUL7Q14999 1698 aa20.77■□□□□ 0.92
TNS3-207ENST00000450444 CEP162Q5TB80 1403 aa20.76■□□□□ 0.91
TNS3-207ENST00000450444 TRIM26Q12899 539 aaPredicted RBP20.74■□□□□ 0.91
TNS3-207ENST00000450444 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
TNS3-207ENST00000450444 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.91e-6■■□□□ 12
TNS3-207ENST00000450444 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
TNS3-207ENST00000450444 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
TNS3-207ENST00000450444 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
TNS3-207ENST00000450444 CLIP1P30622 1438 aa20.62■□□□□ 0.89
TNS3-207ENST00000450444 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
TNS3-207ENST00000450444 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.89
TNS3-207ENST00000450444 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
TNS3-207ENST00000450444 CTTNBP2Q8WZ74 1663 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms