RNA–Protein interactions for RNA: ENST00000450074.5

SEC23B-206, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 5

Gene SEC23B, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-206ENST00000450074 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
SEC23B-206ENST00000450074 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
SEC23B-206ENST00000450074 ABCC9O60706 1549 aa19.13■□□□□ 0.65
SEC23B-206ENST00000450074 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
SEC23B-206ENST00000450074 ZCCHC6Q5VYS8 1495 aaKnown RBP18.73■□□□□ 0.59
SEC23B-206ENST00000450074 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
SEC23B-206ENST00000450074 NACADO15069 1562 aa18.54■□□□□ 0.56
SEC23B-206ENST00000450074 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
SEC23B-206ENST00000450074 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
SEC23B-206ENST00000450074 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
SEC23B-206ENST00000450074 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
SEC23B-206ENST00000450074 SHROOM4Q9ULL8 1493 aa17.98■□□□□ 0.47
SEC23B-206ENST00000450074 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
SEC23B-206ENST00000450074 BICRAQ9NZM4 1560 aa17.92■□□□□ 0.46
SEC23B-206ENST00000450074 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
SEC23B-206ENST00000450074 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
SEC23B-206ENST00000450074 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
SEC23B-206ENST00000450074 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
SEC23B-206ENST00000450074 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
SEC23B-206ENST00000450074 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
SEC23B-206ENST00000450074 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
SEC23B-206ENST00000450074 CC2D2AQ9P2K1 1620 aa17.26■□□□□ 0.35
SEC23B-206ENST00000450074 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
SEC23B-206ENST00000450074 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
SEC23B-206ENST00000450074 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
SEC23B-206ENST00000450074 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.33
SEC23B-206ENST00000450074 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
SEC23B-206ENST00000450074 WIZO95785 1651 aa17.1■□□□□ 0.33
SEC23B-206ENST00000450074 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
SEC23B-206ENST00000450074 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
SEC23B-206ENST00000450074 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
SEC23B-206ENST00000450074 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
SEC23B-206ENST00000450074 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
SEC23B-206ENST00000450074 NESP48681 1621 aa16.65■□□□□ 0.26
SEC23B-206ENST00000450074 CFTRP13569 1480 aa16.64■□□□□ 0.25
SEC23B-206ENST00000450074 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.24
SEC23B-206ENST00000450074 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
SEC23B-206ENST00000450074 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
SEC23B-206ENST00000450074 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
SEC23B-206ENST00000450074 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
SEC23B-206ENST00000450074 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
SEC23B-206ENST00000450074 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
SEC23B-206ENST00000450074 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
SEC23B-206ENST00000450074 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
SEC23B-206ENST00000450074 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
SEC23B-206ENST00000450074 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
SEC23B-206ENST00000450074 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
SEC23B-206ENST00000450074 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
SEC23B-206ENST00000450074 WDR62O43379 1518 aa16.21■□□□□ 0.19
SEC23B-206ENST00000450074 CUX1P39880 1505 aa16.21■□□□□ 0.19
SEC23B-206ENST00000450074 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
SEC23B-206ENST00000450074 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
SEC23B-206ENST00000450074 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
SEC23B-206ENST00000450074 CUX2O14529 1486 aa16.15■□□□□ 0.18
SEC23B-206ENST00000450074 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
SEC23B-206ENST00000450074 SOGA1O94964 1423 aa16.11■□□□□ 0.17
SEC23B-206ENST00000450074 POLA1P09884 1462 aaPredicted RBP16.11■□□□□ 0.17
SEC23B-206ENST00000450074 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
SEC23B-206ENST00000450074 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
SEC23B-206ENST00000450074 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
SEC23B-206ENST00000450074 BIVM-ERCC5R4GMW8 1640 aa16.07■□□□□ 0.16
SEC23B-206ENST00000450074 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
SEC23B-206ENST00000450074 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
SEC23B-206ENST00000450074 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
SEC23B-206ENST00000450074 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
SEC23B-206ENST00000450074 ABCA10Q8WWZ4 1543 aa15.97■□□□□ 0.15
SEC23B-206ENST00000450074 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.15
SEC23B-206ENST00000450074 KIF27Q86VH2 1401 aa15.89■□□□□ 0.13
SEC23B-206ENST00000450074 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
SEC23B-206ENST00000450074 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
SEC23B-206ENST00000450074 IGF1RP08069 1367 aa15.87■□□□□ 0.13
SEC23B-206ENST00000450074 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
SEC23B-206ENST00000450074 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
SEC23B-206ENST00000450074 FAM9AQ8IZU1 332 aaPredicted RBP15.82■□□□□ 0.12
SEC23B-206ENST00000450074 EIF4G3O43432 1585 aaKnown RBP15.82■□□□□ 0.12
SEC23B-206ENST00000450074 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
SEC23B-206ENST00000450074 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
SEC23B-206ENST00000450074 EEA1Q15075 1411 aa15.77■□□□□ 0.11
SEC23B-206ENST00000450074 CHMP7Q8WUX9 453 aaPredicted RBP15.76■□□□□ 0.11
SEC23B-206ENST00000450074 ERICH3Q5RHP9 1530 aa15.76■□□□□ 0.11
SEC23B-206ENST00000450074 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
SEC23B-206ENST00000450074 FBLN2P98095 1184 aa15.75■□□□□ 0.11
SEC23B-206ENST00000450074 CARMIL1Q5VZK9 1371 aa15.75■□□□□ 0.11
SEC23B-206ENST00000450074 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
SEC23B-206ENST00000450074 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
SEC23B-206ENST00000450074 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
SEC23B-206ENST00000450074 PBRM1Q86U86 1689 aa15.68■□□□□ 0.1
SEC23B-206ENST00000450074 PRXQ9BXM0 1461 aa15.67■□□□□ 0.1
SEC23B-206ENST00000450074 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
SEC23B-206ENST00000450074 RAPGEF2Q9Y4G8 1499 aa15.64■□□□□ 0.09
SEC23B-206ENST00000450074 ADAMTS12P58397 1594 aa15.63■□□□□ 0.09
SEC23B-206ENST00000450074 GRIN2AQ12879 1464 aa15.61■□□□□ 0.09
SEC23B-206ENST00000450074 CUL7Q14999 1698 aa15.6■□□□□ 0.09
SEC23B-206ENST00000450074 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
SEC23B-206ENST00000450074 NUP160Q12769 1436 aa15.56■□□□□ 0.08
SEC23B-206ENST00000450074 LOC105371045A0A1W2PR82 267 aa15.55■□□□□ 0.08
SEC23B-206ENST00000450074 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
SEC23B-206ENST00000450074 CHD1O14646 1710 aa15.53■□□□□ 0.08
SEC23B-206ENST00000450074 KIF21BO75037 1637 aa15.51■□□□□ 0.07
SEC23B-206ENST00000450074 JPH4Q96JJ6 628 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms