RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
CPSF7-207ENST00000449811 ABCC9O60706 1549 aa32.11■■■□□ 2.73
CPSF7-207ENST00000449811 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
CPSF7-207ENST00000449811 DNAJC5BQ9UF47 199 aa30.55■■■□□ 2.48
CPSF7-207ENST00000449811 RB1CC1Q8TDY2 1594 aa30.34■■■□□ 2.45
CPSF7-207ENST00000449811 NACADO15069 1562 aa30.01■■■□□ 2.39
CPSF7-207ENST00000449811 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.37
CPSF7-207ENST00000449811 DCAF8L2P0C7V8 631 aa29.79■■■□□ 2.36
CPSF7-207ENST00000449811 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
CPSF7-207ENST00000449811 BICRAQ9NZM4 1560 aa29.46■■■□□ 2.31
CPSF7-207ENST00000449811 MYO15BQ96JP2 1530 aa29.44■■■□□ 2.3
CPSF7-207ENST00000449811 SHROOM4Q9ULL8 1493 aa29.04■■■□□ 2.24
CPSF7-207ENST00000449811 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
CPSF7-207ENST00000449811 CC2D2AQ9P2K1 1620 aa28.97■■■□□ 2.23
CPSF7-207ENST00000449811 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
CPSF7-207ENST00000449811 DCAF1Q9Y4B6 1507 aa28.88■■■□□ 2.21
CPSF7-207ENST00000449811 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
CPSF7-207ENST00000449811 SCRIBQ14160 1630 aa28.79■■■□□ 2.2
CPSF7-207ENST00000449811 DNAJC5Q9H3Z4 198 aa28.41■■■□□ 2.14
CPSF7-207ENST00000449811 CUX2O14529 1486 aa27.88■■■□□ 2.05
CPSF7-207ENST00000449811 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
CPSF7-207ENST00000449811 NCAPD3P42695 1498 aa27.72■■■□□ 2.03
CPSF7-207ENST00000449811 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
CPSF7-207ENST00000449811 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
CPSF7-207ENST00000449811 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
CPSF7-207ENST00000449811 NESP48681 1621 aa27.44■■□□□ 1.98
CPSF7-207ENST00000449811 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
CPSF7-207ENST00000449811 BAZ1BQ9UIG0 1483 aaKnown RBP27.29■■□□□ 1.96
CPSF7-207ENST00000449811 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
CPSF7-207ENST00000449811 BAZ1AQ9NRL2 1556 aaPredicted RBP27.21■■□□□ 1.95
CPSF7-207ENST00000449811 LAMC3Q9Y6N6 1575 aa27.17■■□□□ 1.94
CPSF7-207ENST00000449811 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.93
CPSF7-207ENST00000449811 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
CPSF7-207ENST00000449811 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
CPSF7-207ENST00000449811 TRIM41Q8WV44 630 aa26.99■■□□□ 1.91
CPSF7-207ENST00000449811 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
CPSF7-207ENST00000449811 CADPSQ9ULU8 1353 aa26.87■■□□□ 1.89
CPSF7-207ENST00000449811 MRC2Q9UBG0 1479 aa26.84■■□□□ 1.89
CPSF7-207ENST00000449811 WDR62O43379 1518 aa26.78■■□□□ 1.88
CPSF7-207ENST00000449811 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
CPSF7-207ENST00000449811 WIZO95785 1651 aa26.6■■□□□ 1.85
CPSF7-207ENST00000449811 FANCD2Q9BXW9 1451 aa26.56■■□□□ 1.84
CPSF7-207ENST00000449811 OSCARQ8IYS5 282 aa26.53■■□□□ 1.84
CPSF7-207ENST00000449811 CFTRP13569 1480 aa26.44■■□□□ 1.82
CPSF7-207ENST00000449811 URB2Q14146 1524 aaKnown RBP26.36■■□□□ 1.81
CPSF7-207ENST00000449811 TOP2AP11388 1531 aaKnown RBP26.25■■□□□ 1.79
CPSF7-207ENST00000449811 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
CPSF7-207ENST00000449811 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
CPSF7-207ENST00000449811 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
CPSF7-207ENST00000449811 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
CPSF7-207ENST00000449811 IFT140Q96RY7 1462 aa26.12■■□□□ 1.77
CPSF7-207ENST00000449811 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
CPSF7-207ENST00000449811 ARHGEF11O15085 1522 aa26.1■■□□□ 1.77
CPSF7-207ENST00000449811 PRDM2Q13029 1718 aa26.09■■□□□ 1.77
CPSF7-207ENST00000449811 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
CPSF7-207ENST00000449811 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
CPSF7-207ENST00000449811 CYB5RLQ6IPT4 315 aa25.95■■□□□ 1.74
CPSF7-207ENST00000449811 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.74
CPSF7-207ENST00000449811 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
CPSF7-207ENST00000449811 DNMBPQ6XZF7 1577 aa25.85■■□□□ 1.73
CPSF7-207ENST00000449811 TRHP20396 242 aaPredicted RBP25.84■■□□□ 1.73
CPSF7-207ENST00000449811 AQRO60306 1485 aaKnown RBP eCLIP25.83■■□□□ 1.733e-7■■■■■ 48.1
CPSF7-207ENST00000449811 CHD1O14646 1710 aa25.82■■□□□ 1.72
CPSF7-207ENST00000449811 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
CPSF7-207ENST00000449811 TARBP1Q13395 1621 aaKnown RBP25.78■■□□□ 1.72
CPSF7-207ENST00000449811 FBLN2P98095 1184 aa25.78■■□□□ 1.72
CPSF7-207ENST00000449811 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
CPSF7-207ENST00000449811 RAD54L2Q9Y4B4 1467 aa25.62■■□□□ 1.69
CPSF7-207ENST00000449811 TDRD9Q8NDG6 1382 aaKnown RBP25.6■■□□□ 1.69
CPSF7-207ENST00000449811 SOGA1O94964 1423 aa25.58■■□□□ 1.69
CPSF7-207ENST00000449811 SNAPC4Q5SXM2 1469 aa25.56■■□□□ 1.68
CPSF7-207ENST00000449811 CLASP1Q7Z460 1538 aa25.54■■□□□ 1.68
CPSF7-207ENST00000449811 CHMP7Q8WUX9 453 aaPredicted RBP25.5■■□□□ 1.67
CPSF7-207ENST00000449811 WDR97A6NE52 1622 aa25.49■■□□□ 1.67
CPSF7-207ENST00000449811 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
CPSF7-207ENST00000449811 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
CPSF7-207ENST00000449811 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
CPSF7-207ENST00000449811 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
CPSF7-207ENST00000449811 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
CPSF7-207ENST00000449811 SYNJ2O15056 1496 aa25.39■■□□□ 1.65
CPSF7-207ENST00000449811 CUX1P39880 1505 aa25.37■■□□□ 1.65
CPSF7-207ENST00000449811 GAPVD1Q14C86 1478 aa25.32■■□□□ 1.64
CPSF7-207ENST00000449811 PBRM1Q86U86 1689 aa25.25■■□□□ 1.63
CPSF7-207ENST00000449811 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
CPSF7-207ENST00000449811 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
CPSF7-207ENST00000449811 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
CPSF7-207ENST00000449811 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
CPSF7-207ENST00000449811 CEP170Q5SW79 1584 aa25.03■■□□□ 1.6
CPSF7-207ENST00000449811 NUP160Q12769 1436 aa25.03■■□□□ 1.6
CPSF7-207ENST00000449811 ADAMTS12P58397 1594 aa25.01■■□□□ 1.59
CPSF7-207ENST00000449811 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
CPSF7-207ENST00000449811 SHROOM2Q13796 1616 aa24.94■■□□□ 1.58
CPSF7-207ENST00000449811 FHAD1B1AJZ9 1412 aa24.93■■□□□ 1.58
CPSF7-207ENST00000449811 KIF13AQ9H1H9 1805 aa24.86■■□□□ 1.57
CPSF7-207ENST00000449811 PRG4Q92954 1404 aaPredicted RBP24.83■■□□□ 1.57
CPSF7-207ENST00000449811 ERICH3Q5RHP9 1530 aa24.82■■□□□ 1.56
CPSF7-207ENST00000449811 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
CPSF7-207ENST00000449811 BIVM-ERCC5R4GMW8 1640 aa24.81■■□□□ 1.56
CPSF7-207ENST00000449811 JPH4Q96JJ6 628 aa24.77■■□□□ 1.56
CPSF7-207ENST00000449811 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms