RNA–Protein interactions for RNA: ENST00000449713.1

AP001065.1-201, humanhuman

TSL 3 BASIC

Gene AP001065.1, Length 912 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001065.1-201ENST00000449713 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
AP001065.1-201ENST00000449713 ABCC9O60706 1549 aa24.25■■□□□ 1.47
AP001065.1-201ENST00000449713 CCDC180Q9P1Z9 1646 aa24.09■■□□□ 1.45
AP001065.1-201ENST00000449713 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
AP001065.1-201ENST00000449713 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
AP001065.1-201ENST00000449713 NACADO15069 1562 aa22.8■■□□□ 1.24
AP001065.1-201ENST00000449713 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
AP001065.1-201ENST00000449713 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
AP001065.1-201ENST00000449713 UNC13AQ9UPW8 1703 aa22.52■■□□□ 1.2
AP001065.1-201ENST00000449713 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
AP001065.1-201ENST00000449713 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
AP001065.1-201ENST00000449713 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
AP001065.1-201ENST00000449713 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
AP001065.1-201ENST00000449713 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
AP001065.1-201ENST00000449713 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
AP001065.1-201ENST00000449713 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.09
AP001065.1-201ENST00000449713 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.09
AP001065.1-201ENST00000449713 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
AP001065.1-201ENST00000449713 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
AP001065.1-201ENST00000449713 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
AP001065.1-201ENST00000449713 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
AP001065.1-201ENST00000449713 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
AP001065.1-201ENST00000449713 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
AP001065.1-201ENST00000449713 HMGXB3Q12766 1538 aa20.89■□□□□ 0.94
AP001065.1-201ENST00000449713 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
AP001065.1-201ENST00000449713 CUX2O14529 1486 aa20.88■□□□□ 0.93
AP001065.1-201ENST00000449713 NESP48681 1621 aa20.83■□□□□ 0.93
AP001065.1-201ENST00000449713 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
AP001065.1-201ENST00000449713 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.92
AP001065.1-201ENST00000449713 PEG3Q9GZU2 1588 aa20.74■□□□□ 0.91
AP001065.1-201ENST00000449713 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
AP001065.1-201ENST00000449713 THOC2Q8NI27 1593 aaKnown RBP20.6■□□□□ 0.89
AP001065.1-201ENST00000449713 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
AP001065.1-201ENST00000449713 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
AP001065.1-201ENST00000449713 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
AP001065.1-201ENST00000449713 WIZO95785 1651 aa20.45■□□□□ 0.86
AP001065.1-201ENST00000449713 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
AP001065.1-201ENST00000449713 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
AP001065.1-201ENST00000449713 WDR62O43379 1518 aa20.28■□□□□ 0.84
AP001065.1-201ENST00000449713 RSF1Q96T23 1441 aaPredicted RBP20.23■□□□□ 0.83
AP001065.1-201ENST00000449713 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
AP001065.1-201ENST00000449713 FANCD2Q9BXW9 1451 aa20.2■□□□□ 0.82
AP001065.1-201ENST00000449713 CFTRP13569 1480 aa20.18■□□□□ 0.82
AP001065.1-201ENST00000449713 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
AP001065.1-201ENST00000449713 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
AP001065.1-201ENST00000449713 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
AP001065.1-201ENST00000449713 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
AP001065.1-201ENST00000449713 PRDM2Q13029 1718 aa19.94■□□□□ 0.78
AP001065.1-201ENST00000449713 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
AP001065.1-201ENST00000449713 ZNF608Q9ULD9 1512 aaPredicted RBP19.85■□□□□ 0.77
AP001065.1-201ENST00000449713 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
AP001065.1-201ENST00000449713 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
AP001065.1-201ENST00000449713 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
AP001065.1-201ENST00000449713 RIMBP3CA6NJZ7 1639 aa19.71■□□□□ 0.75
AP001065.1-201ENST00000449713 RIMBP3BA6NNM3 1639 aa19.71■□□□□ 0.75
AP001065.1-201ENST00000449713 RIMBP3Q9UFD9 1639 aa19.71■□□□□ 0.75
AP001065.1-201ENST00000449713 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
AP001065.1-201ENST00000449713 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
AP001065.1-201ENST00000449713 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
AP001065.1-201ENST00000449713 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.74
AP001065.1-201ENST00000449713 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
AP001065.1-201ENST00000449713 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
AP001065.1-201ENST00000449713 CHD1O14646 1710 aa19.58■□□□□ 0.72
AP001065.1-201ENST00000449713 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
AP001065.1-201ENST00000449713 FBLN2P98095 1184 aa19.51■□□□□ 0.71
AP001065.1-201ENST00000449713 TDRD9Q8NDG6 1382 aaKnown RBP19.51■□□□□ 0.71
AP001065.1-201ENST00000449713 CYB5RLQ6IPT4 315 aa19.5■□□□□ 0.71
AP001065.1-201ENST00000449713 SOGA1O94964 1423 aa19.5■□□□□ 0.71
AP001065.1-201ENST00000449713 FGD5Q6ZNL6 1462 aa19.47■□□□□ 0.71
AP001065.1-201ENST00000449713 CUX1P39880 1505 aa19.46■□□□□ 0.71
AP001065.1-201ENST00000449713 ARAP1Q96P48 1450 aa19.45■□□□□ 0.7
AP001065.1-201ENST00000449713 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
AP001065.1-201ENST00000449713 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
AP001065.1-201ENST00000449713 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
AP001065.1-201ENST00000449713 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
AP001065.1-201ENST00000449713 GRIN2BQ13224 1484 aa19.33■□□□□ 0.68
AP001065.1-201ENST00000449713 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
AP001065.1-201ENST00000449713 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
AP001065.1-201ENST00000449713 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
AP001065.1-201ENST00000449713 SYNJ1O43426 1573 aa19.28■□□□□ 0.68
AP001065.1-201ENST00000449713 PBRM1Q86U86 1689 aa19.27■□□□□ 0.67
AP001065.1-201ENST00000449713 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
AP001065.1-201ENST00000449713 GAPVD1Q14C86 1478 aa19.26■□□□□ 0.67
AP001065.1-201ENST00000449713 ABCA10Q8WWZ4 1543 aa19.23■□□□□ 0.67
AP001065.1-201ENST00000449713 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
AP001065.1-201ENST00000449713 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
AP001065.1-201ENST00000449713 ERCC6L2Q5T890 1561 aa19.1■□□□□ 0.65
AP001065.1-201ENST00000449713 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
AP001065.1-201ENST00000449713 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
AP001065.1-201ENST00000449713 BIVM-ERCC5R4GMW8 1640 aa19.08■□□□□ 0.65
AP001065.1-201ENST00000449713 ADAMTS12P58397 1594 aa19.07■□□□□ 0.64
AP001065.1-201ENST00000449713 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
AP001065.1-201ENST00000449713 NUP160Q12769 1436 aa19.04■□□□□ 0.64
AP001065.1-201ENST00000449713 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
AP001065.1-201ENST00000449713 SHROOM2Q13796 1616 aa18.97■□□□□ 0.63
AP001065.1-201ENST00000449713 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
AP001065.1-201ENST00000449713 PRG4Q92954 1404 aaPredicted RBP18.87■□□□□ 0.61
AP001065.1-201ENST00000449713 JPH4Q96JJ6 628 aa18.84■□□□□ 0.61
AP001065.1-201ENST00000449713 RUSC2Q8N2Y8 1516 aa18.81■□□□□ 0.6
AP001065.1-201ENST00000449713 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms