RNA–Protein interactions for RNA: ENST00000449641.6

RFC5-203, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-203ENST00000449641 NISCHQ9Y2I1 1504 aa15.98■□□□□ 0.15
RFC5-203ENST00000449641 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.13
RFC5-203ENST00000449641 ABCC9O60706 1549 aa13.71□□□□□ -0.21
RFC5-203ENST00000449641 ZCCHC6Q5VYS8 1495 aaKnown RBP13.36□□□□□ -0.27
RFC5-203ENST00000449641 MYO15BQ96JP2 1530 aa13.32□□□□□ -0.28
RFC5-203ENST00000449641 NACADO15069 1562 aa13.31□□□□□ -0.28
RFC5-203ENST00000449641 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
RFC5-203ENST00000449641 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
RFC5-203ENST00000449641 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
RFC5-203ENST00000449641 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
RFC5-203ENST00000449641 BICRAQ9NZM4 1560 aa12.94□□□□□ -0.34
RFC5-203ENST00000449641 SCRIBQ14160 1630 aa12.88□□□□□ -0.35
RFC5-203ENST00000449641 SHROOM4Q9ULL8 1493 aa12.81□□□□□ -0.36
RFC5-203ENST00000449641 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
RFC5-203ENST00000449641 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
RFC5-203ENST00000449641 EIF4G1Q04637 1599 aaKnown RBP12.55□□□□□ -0.4
RFC5-203ENST00000449641 CC2D2AQ9P2K1 1620 aa12.46□□□□□ -0.41
RFC5-203ENST00000449641 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
RFC5-203ENST00000449641 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
RFC5-203ENST00000449641 BAZ1AQ9NRL2 1556 aaPredicted RBP12.36□□□□□ -0.43
RFC5-203ENST00000449641 PEG3Q9GZU2 1588 aa12.32□□□□□ -0.44
RFC5-203ENST00000449641 MROH2BQ7Z745 1585 aa12.31□□□□□ -0.44
RFC5-203ENST00000449641 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
RFC5-203ENST00000449641 ATAD2BQ9ULI0 1458 aa12.29□□□□□ -0.44
RFC5-203ENST00000449641 AEBP2Q6ZN18 517 aaPredicted RBP12.29□□□□□ -0.44
RFC5-203ENST00000449641 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
RFC5-203ENST00000449641 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
RFC5-203ENST00000449641 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
RFC5-203ENST00000449641 WIZO95785 1651 aa12.16□□□□□ -0.46
RFC5-203ENST00000449641 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
RFC5-203ENST00000449641 CHIC1Q5VXU3 224 aa12.09□□□□□ -0.47
RFC5-203ENST00000449641 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
RFC5-203ENST00000449641 LAMC3Q9Y6N6 1575 aa11.94□□□□□ -0.5
RFC5-203ENST00000449641 NESP48681 1621 aa11.93□□□□□ -0.5
RFC5-203ENST00000449641 CCDC88BA6NC98 1476 aa11.9□□□□□ -0.5
RFC5-203ENST00000449641 CADPSQ9ULU8 1353 aa11.9□□□□□ -0.5
RFC5-203ENST00000449641 CFTRP13569 1480 aa11.88□□□□□ -0.51
RFC5-203ENST00000449641 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
RFC5-203ENST00000449641 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
RFC5-203ENST00000449641 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
RFC5-203ENST00000449641 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
RFC5-203ENST00000449641 SUPT5HO00267 1087 aaKnown RBP11.78□□□□□ -0.52
RFC5-203ENST00000449641 ERCC6Q03468 1493 aa11.76□□□□□ -0.53
RFC5-203ENST00000449641 FANCD2Q9BXW9 1451 aa11.75□□□□□ -0.53
RFC5-203ENST00000449641 CUX2O14529 1486 aa11.71□□□□□ -0.53
RFC5-203ENST00000449641 CEP164Q9UPV0 1460 aa11.71□□□□□ -0.53
RFC5-203ENST00000449641 WDR62O43379 1518 aa11.7□□□□□ -0.54
RFC5-203ENST00000449641 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
RFC5-203ENST00000449641 URB2Q14146 1524 aaKnown RBP11.66□□□□□ -0.54
RFC5-203ENST00000449641 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
RFC5-203ENST00000449641 TOPBP1Q92547 1522 aa11.59□□□□□ -0.55
RFC5-203ENST00000449641 ABCC8Q09428 1581 aa11.58□□□□□ -0.55
RFC5-203ENST00000449641 CUX1P39880 1505 aa11.55□□□□□ -0.56
RFC5-203ENST00000449641 TARBP1Q13395 1621 aaKnown RBP11.5□□□□□ -0.57
RFC5-203ENST00000449641 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
RFC5-203ENST00000449641 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
RFC5-203ENST00000449641 IFT140Q96RY7 1462 aa11.48□□□□□ -0.57
RFC5-203ENST00000449641 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
RFC5-203ENST00000449641 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
RFC5-203ENST00000449641 FGD5Q6ZNL6 1462 aa11.46□□□□□ -0.57
RFC5-203ENST00000449641 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
RFC5-203ENST00000449641 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
RFC5-203ENST00000449641 ZNF608Q9ULD9 1512 aaPredicted RBP11.43□□□□□ -0.58
RFC5-203ENST00000449641 RAD54L2Q9Y4B4 1467 aa11.42□□□□□ -0.58
RFC5-203ENST00000449641 SOGA1O94964 1423 aa11.41□□□□□ -0.58
RFC5-203ENST00000449641 EIF4G3O43432 1585 aaKnown RBP11.4□□□□□ -0.58
RFC5-203ENST00000449641 ABCA10Q8WWZ4 1543 aa11.39□□□□□ -0.59
RFC5-203ENST00000449641 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
RFC5-203ENST00000449641 AQRO60306 1485 aaKnown RBP eCLIP11.35□□□□□ -0.591e-6■■■□□ 15.7
RFC5-203ENST00000449641 TDRD9Q8NDG6 1382 aaKnown RBP11.32□□□□□ -0.6
RFC5-203ENST00000449641 GAPVD1Q14C86 1478 aa11.3□□□□□ -0.6
RFC5-203ENST00000449641 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
RFC5-203ENST00000449641 GRIN2BQ13224 1484 aa11.29□□□□□ -0.6
RFC5-203ENST00000449641 MAGI1Q96QZ7 1491 aaPredicted RBP11.26□□□□□ -0.61
RFC5-203ENST00000449641 SNAPC4Q5SXM2 1469 aa11.25□□□□□ -0.61
RFC5-203ENST00000449641 ERICH3Q5RHP9 1530 aa11.25□□□□□ -0.61
RFC5-203ENST00000449641 CHD1O14646 1710 aa11.23□□□□□ -0.61
RFC5-203ENST00000449641 DNAJC5Q9H3Z4 198 aa11.23□□□□□ -0.61
RFC5-203ENST00000449641 ADAMTS12P58397 1594 aa11.22□□□□□ -0.61
RFC5-203ENST00000449641 SYNJ2O15056 1496 aa11.21□□□□□ -0.61
RFC5-203ENST00000449641 KIF27Q86VH2 1401 aa11.19□□□□□ -0.62
RFC5-203ENST00000449641 FHAD1B1AJZ9 1412 aa11.18□□□□□ -0.62
RFC5-203ENST00000449641 IGF1RP08069 1367 aa11.17□□□□□ -0.62
RFC5-203ENST00000449641 CLASP1Q7Z460 1538 aa11.16□□□□□ -0.62
RFC5-203ENST00000449641 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
RFC5-203ENST00000449641 RUSC2Q8N2Y8 1516 aa11.15□□□□□ -0.62
RFC5-203ENST00000449641 CUL7Q14999 1698 aa11.15□□□□□ -0.62
RFC5-203ENST00000449641 GRIN2AQ12879 1464 aa11.15□□□□□ -0.62
RFC5-203ENST00000449641 TRIM41Q8WV44 630 aa11.15□□□□□ -0.62
RFC5-203ENST00000449641 NUP160Q12769 1436 aa11.14□□□□□ -0.63
RFC5-203ENST00000449641 CEP170Q5SW79 1584 aa11.11□□□□□ -0.63
RFC5-203ENST00000449641 CHMP7Q8WUX9 453 aaPredicted RBP11.1□□□□□ -0.63
RFC5-203ENST00000449641 CARMIL1Q5VZK9 1371 aa11.08□□□□□ -0.64
RFC5-203ENST00000449641 FBLN2P98095 1184 aa11.07□□□□□ -0.64
RFC5-203ENST00000449641 PRXQ9BXM0 1461 aa11.06□□□□□ -0.64
RFC5-203ENST00000449641 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
RFC5-203ENST00000449641 EEA1Q15075 1411 aa11.06□□□□□ -0.64
RFC5-203ENST00000449641 RIMBP3CA6NJZ7 1639 aa11.05□□□□□ -0.64
RFC5-203ENST00000449641 RIMBP3BA6NNM3 1639 aa11.05□□□□□ -0.64
RFC5-203ENST00000449641 RIMBP3Q9UFD9 1639 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms