RNA–Protein interactions for RNA: ENST00000449311.5

CAP1-216, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 5

Gene CAP1, Length 681 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-216ENST00000449311 NISCHQ9Y2I1 1504 aa42.55■■■■■ 4.4
CAP1-216ENST00000449311 CCDC180Q9P1Z9 1646 aa38.15■■■■□ 3.7
CAP1-216ENST00000449311 ABCC9O60706 1549 aa37.56■■■■□ 3.6
CAP1-216ENST00000449311 RB1CC1Q8TDY2 1594 aa36.06■■■■□ 3.36
CAP1-216ENST00000449311 NACADO15069 1562 aa35.91■■■■□ 3.34
CAP1-216ENST00000449311 MYO15BQ96JP2 1530 aa35.58■■■■□ 3.29
CAP1-216ENST00000449311 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.28
CAP1-216ENST00000449311 UNC13AQ9UPW8 1703 aa35.34■■■■□ 3.25
CAP1-216ENST00000449311 ZCCHC6Q5VYS8 1495 aaKnown RBP35.34■■■■□ 3.25
CAP1-216ENST00000449311 DCAF1Q9Y4B6 1507 aa35.25■■■■□ 3.23
CAP1-216ENST00000449311 BICRAQ9NZM4 1560 aa34.96■■■■□ 3.19
CAP1-216ENST00000449311 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
CAP1-216ENST00000449311 DNAJC5BQ9UF47 199 aa34.86■■■■□ 3.17
CAP1-216ENST00000449311 SCRIBQ14160 1630 aa34.63■■■■□ 3.13
CAP1-216ENST00000449311 SHROOM4Q9ULL8 1493 aa34.61■■■■□ 3.13
CAP1-216ENST00000449311 EIF4G1Q04637 1599 aaKnown RBP34.06■■■■□ 3.04
CAP1-216ENST00000449311 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
CAP1-216ENST00000449311 CECR2Q9BXF3 1484 aa33.83■■■■□ 3.01
CAP1-216ENST00000449311 SMARCA4P51532 1647 aa33.13■■■□□ 2.89
CAP1-216ENST00000449311 NCAPD3P42695 1498 aa33.11■■■□□ 2.89
CAP1-216ENST00000449311 BAZ1AQ9NRL2 1556 aaPredicted RBP33.03■■■□□ 2.88
CAP1-216ENST00000449311 ATAD2BQ9ULI0 1458 aa33.02■■■□□ 2.88
CAP1-216ENST00000449311 SMARCA2P51531 1590 aa33.01■■■□□ 2.88
CAP1-216ENST00000449311 HMGXB3Q12766 1538 aa32.92■■■□□ 2.86
CAP1-216ENST00000449311 PEG3Q9GZU2 1588 aa32.86■■■□□ 2.85
CAP1-216ENST00000449311 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
CAP1-216ENST00000449311 BAZ1BQ9UIG0 1483 aaKnown RBP32.72■■■□□ 2.83
CAP1-216ENST00000449311 ERCC6Q03468 1493 aa32.42■■■□□ 2.78
CAP1-216ENST00000449311 WIZO95785 1651 aa32.42■■■□□ 2.78
CAP1-216ENST00000449311 NESP48681 1621 aa32.38■■■□□ 2.77
CAP1-216ENST00000449311 LAMC3Q9Y6N6 1575 aa32.35■■■□□ 2.77
CAP1-216ENST00000449311 CUX2O14529 1486 aa32.32■■■□□ 2.76
CAP1-216ENST00000449311 RSF1Q96T23 1441 aaPredicted RBP32.19■■■□□ 2.74
CAP1-216ENST00000449311 KIF21AQ7Z4S6 1674 aa32.11■■■□□ 2.73
CAP1-216ENST00000449311 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
CAP1-216ENST00000449311 PDS5BQ9NTI5 1447 aa32.08■■■□□ 2.73
CAP1-216ENST00000449311 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.73
CAP1-216ENST00000449311 TOP2AP11388 1531 aaKnown RBP32.04■■■□□ 2.72
CAP1-216ENST00000449311 CFTRP13569 1480 aa31.82■■■□□ 2.68
CAP1-216ENST00000449311 DNAJC5Q9H3Z4 198 aa31.81■■■□□ 2.68
CAP1-216ENST00000449311 MRC2Q9UBG0 1479 aa31.77■■■□□ 2.68
CAP1-216ENST00000449311 CEP164Q9UPV0 1460 aa31.72■■■□□ 2.67
CAP1-216ENST00000449311 WDR62O43379 1518 aa31.72■■■□□ 2.67
CAP1-216ENST00000449311 PRDM2Q13029 1718 aa31.72■■■□□ 2.67
CAP1-216ENST00000449311 FANCD2Q9BXW9 1451 aa31.71■■■□□ 2.67
CAP1-216ENST00000449311 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
CAP1-216ENST00000449311 URB2Q14146 1524 aaKnown RBP31.42■■■□□ 2.62
CAP1-216ENST00000449311 ABCC8Q09428 1581 aa31.2■■■□□ 2.58
CAP1-216ENST00000449311 TOPBP1Q92547 1522 aa31.17■■■□□ 2.58
CAP1-216ENST00000449311 DNMBPQ6XZF7 1577 aa31.12■■■□□ 2.57
CAP1-216ENST00000449311 IFT140Q96RY7 1462 aa31.09■■■□□ 2.57
CAP1-216ENST00000449311 SUPT5HO00267 1087 aaKnown RBP30.94■■■□□ 2.54
CAP1-216ENST00000449311 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
CAP1-216ENST00000449311 TARBP1Q13395 1621 aaKnown RBP30.91■■■□□ 2.54
CAP1-216ENST00000449311 EIF4G3O43432 1585 aaKnown RBP30.87■■■□□ 2.53
CAP1-216ENST00000449311 POLA1P09884 1462 aaPredicted RBP30.86■■■□□ 2.53
CAP1-216ENST00000449311 OSCARQ8IYS5 282 aa30.84■■■□□ 2.53
CAP1-216ENST00000449311 CUX1P39880 1505 aa30.75■■■□□ 2.51
CAP1-216ENST00000449311 FGD5Q6ZNL6 1462 aa30.71■■■□□ 2.51
CAP1-216ENST00000449311 WDR97A6NE52 1622 aa30.71■■■□□ 2.51
CAP1-216ENST00000449311 SOGA1O94964 1423 aa30.71■■■□□ 2.51
CAP1-216ENST00000449311 AQRO60306 1485 aaKnown RBP eCLIP30.7■■■□□ 2.51e-6■■■■□ 24.9
CAP1-216ENST00000449311 RAD54L2Q9Y4B4 1467 aa30.7■■■□□ 2.5
CAP1-216ENST00000449311 CHD1O14646 1710 aa30.62■■■□□ 2.49
CAP1-216ENST00000449311 TDRD9Q8NDG6 1382 aaKnown RBP30.55■■■□□ 2.48
CAP1-216ENST00000449311 BIVM-ERCC5R4GMW8 1640 aa30.47■■■□□ 2.47
CAP1-216ENST00000449311 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
CAP1-216ENST00000449311 RIMBP3CA6NJZ7 1639 aa30.46■■■□□ 2.47
CAP1-216ENST00000449311 RIMBP3BA6NNM3 1639 aa30.46■■■□□ 2.47
CAP1-216ENST00000449311 RIMBP3Q9UFD9 1639 aa30.46■■■□□ 2.47
CAP1-216ENST00000449311 PBRM1Q86U86 1689 aa30.43■■■□□ 2.46
CAP1-216ENST00000449311 TOP2BQ02880 1626 aa30.43■■■□□ 2.46
CAP1-216ENST00000449311 GRIN2BQ13224 1484 aa30.43■■■□□ 2.46
CAP1-216ENST00000449311 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
CAP1-216ENST00000449311 SNAPC4Q5SXM2 1469 aa30.42■■■□□ 2.46
CAP1-216ENST00000449311 MAGI1Q96QZ7 1491 aaPredicted RBP30.42■■■□□ 2.46
CAP1-216ENST00000449311 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
CAP1-216ENST00000449311 FBLN2P98095 1184 aa30.37■■■□□ 2.45
CAP1-216ENST00000449311 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.452e-8■■■□□ 16.7
CAP1-216ENST00000449311 ARHGEF11O15085 1522 aa30.37■■■□□ 2.45
CAP1-216ENST00000449311 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
CAP1-216ENST00000449311 SYNJ1O43426 1573 aa30.35■■■□□ 2.45
CAP1-216ENST00000449311 SYNJ2O15056 1496 aa30.29■■■□□ 2.44
CAP1-216ENST00000449311 CHMP7Q8WUX9 453 aaPredicted RBP30.26■■■□□ 2.43
CAP1-216ENST00000449311 CLASP1Q7Z460 1538 aa30.23■■■□□ 2.43
CAP1-216ENST00000449311 ADAMTS12P58397 1594 aa30.09■■■□□ 2.41
CAP1-216ENST00000449311 ERICH3Q5RHP9 1530 aa30.08■■■□□ 2.41
CAP1-216ENST00000449311 ARAP1Q96P48 1450 aa30.07■■■□□ 2.4
CAP1-216ENST00000449311 CYB5RLQ6IPT4 315 aa30.04■■■□□ 2.4
CAP1-216ENST00000449311 GRIN2AQ12879 1464 aa30.04■■■□□ 2.4
CAP1-216ENST00000449311 FHAD1B1AJZ9 1412 aa30■■■□□ 2.39
CAP1-216ENST00000449311 NUP160Q12769 1436 aa29.93■■■□□ 2.38
CAP1-216ENST00000449311 CEP170Q5SW79 1584 aa29.92■■■□□ 2.38
CAP1-216ENST00000449311 SHROOM2Q13796 1616 aa29.83■■■□□ 2.37
CAP1-216ENST00000449311 KIF27Q86VH2 1401 aa29.78■■■□□ 2.36
CAP1-216ENST00000449311 CUL7Q14999 1698 aa29.76■■■□□ 2.35
CAP1-216ENST00000449311 ERCC6L2Q5T890 1561 aa29.72■■■□□ 2.35
CAP1-216ENST00000449311 IGF1RP08069 1367 aa29.7■■■□□ 2.35
CAP1-216ENST00000449311 RUSC2Q8N2Y8 1516 aa29.67■■■□□ 2.34
CAP1-216ENST00000449311 JPH4Q96JJ6 628 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms