RNA–Protein interactions for RNA: ENST00000448764.5

SRRT-204, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 1,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-204ENST00000448764 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
SRRT-204ENST00000448764 CCDC180Q9P1Z9 1646 aa34.23■■■■□ 3.07
SRRT-204ENST00000448764 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
SRRT-204ENST00000448764 DCAF1Q9Y4B6 1507 aa32.36■■■□□ 2.77
SRRT-204ENST00000448764 ABCC9O60706 1549 aa32.27■■■□□ 2.76
SRRT-204ENST00000448764 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
SRRT-204ENST00000448764 DCAF8L2P0C7V8 631 aa31.98■■■□□ 2.71
SRRT-204ENST00000448764 NACADO15069 1562 aa31.87■■■□□ 2.69
SRRT-204ENST00000448764 RB1CC1Q8TDY2 1594 aa31.62■■■□□ 2.65
SRRT-204ENST00000448764 SHROOM4Q9ULL8 1493 aa31.42■■■□□ 2.62
SRRT-204ENST00000448764 SCRIBQ14160 1630 aa31.26■■■□□ 2.59
SRRT-204ENST00000448764 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
SRRT-204ENST00000448764 BICRAQ9NZM4 1560 aa30.61■■■□□ 2.49
SRRT-204ENST00000448764 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.441e-6■■■■□ 20.3
SRRT-204ENST00000448764 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
SRRT-204ENST00000448764 BAZ1AQ9NRL2 1556 aaPredicted RBP30.16■■■□□ 2.42
SRRT-204ENST00000448764 SUPT5HO00267 1087 aaKnown RBP30.14■■■□□ 2.41
SRRT-204ENST00000448764 RSF1Q96T23 1441 aaPredicted RBP30.11■■■□□ 2.41
SRRT-204ENST00000448764 MROH2BQ7Z745 1585 aa30.05■■■□□ 2.4
SRRT-204ENST00000448764 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
SRRT-204ENST00000448764 WIZO95785 1651 aa29.8■■■□□ 2.36
SRRT-204ENST00000448764 PEG3Q9GZU2 1588 aa29.74■■■□□ 2.35
SRRT-204ENST00000448764 EIF4G1Q04637 1599 aaKnown RBP29.71■■■□□ 2.35
SRRT-204ENST00000448764 SMARCA2P51531 1590 aa29.61■■■□□ 2.33
SRRT-204ENST00000448764 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
SRRT-204ENST00000448764 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
SRRT-204ENST00000448764 BAZ1BQ9UIG0 1483 aaKnown RBP29.38■■■□□ 2.29
SRRT-204ENST00000448764 HMGXB3Q12766 1538 aa29.38■■■□□ 2.29
SRRT-204ENST00000448764 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
SRRT-204ENST00000448764 CC2D2AQ9P2K1 1620 aa29.3■■■□□ 2.28
SRRT-204ENST00000448764 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
SRRT-204ENST00000448764 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
SRRT-204ENST00000448764 CHIC1Q5VXU3 224 aa28.83■■■□□ 2.21
SRRT-204ENST00000448764 CFTRP13569 1480 aa28.64■■■□□ 2.18
SRRT-204ENST00000448764 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
SRRT-204ENST00000448764 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
SRRT-204ENST00000448764 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
SRRT-204ENST00000448764 LAMC3Q9Y6N6 1575 aa28.44■■■□□ 2.14
SRRT-204ENST00000448764 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
SRRT-204ENST00000448764 WRNQ14191 1432 aaPredicted RBP eCLIP28.38■■■□□ 2.136e-7■■■■■ 33.4
SRRT-204ENST00000448764 NESP48681 1621 aa28.27■■■□□ 2.12
SRRT-204ENST00000448764 SYNJ1O43426 1573 aa28.26■■■□□ 2.12
SRRT-204ENST00000448764 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
SRRT-204ENST00000448764 TOP2BQ02880 1626 aa28.23■■■□□ 2.11
SRRT-204ENST00000448764 FANCD2Q9BXW9 1451 aa28.23■■■□□ 2.11
SRRT-204ENST00000448764 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
SRRT-204ENST00000448764 CUX1P39880 1505 aa28.14■■■□□ 2.09
SRRT-204ENST00000448764 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
SRRT-204ENST00000448764 KIF21AQ7Z4S6 1674 aa28.05■■■□□ 2.08
SRRT-204ENST00000448764 DNMBPQ6XZF7 1577 aa28.02■■■□□ 2.08
SRRT-204ENST00000448764 EEA1Q15075 1411 aa27.96■■■□□ 2.07
SRRT-204ENST00000448764 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
SRRT-204ENST00000448764 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
SRRT-204ENST00000448764 SOGA1O94964 1423 aa27.86■■■□□ 2.05
SRRT-204ENST00000448764 FGD5Q6ZNL6 1462 aa27.85■■■□□ 2.05
SRRT-204ENST00000448764 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
SRRT-204ENST00000448764 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
SRRT-204ENST00000448764 POLA1P09884 1462 aaPredicted RBP27.76■■■□□ 2.03
SRRT-204ENST00000448764 RUSC2Q8N2Y8 1516 aa27.75■■■□□ 2.03
SRRT-204ENST00000448764 ERCC6Q03468 1493 aa27.75■■■□□ 2.03
SRRT-204ENST00000448764 WDR62O43379 1518 aa27.72■■■□□ 2.03
SRRT-204ENST00000448764 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
SRRT-204ENST00000448764 THOC2Q8NI27 1593 aaKnown RBP27.67■■■□□ 2.02
SRRT-204ENST00000448764 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
SRRT-204ENST00000448764 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
SRRT-204ENST00000448764 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
SRRT-204ENST00000448764 CUX2O14529 1486 aa27.62■■■□□ 2.01
SRRT-204ENST00000448764 KIF21BO75037 1637 aa27.6■■■□□ 2.01
SRRT-204ENST00000448764 LOC105371045A0A1W2PR82 267 aa27.59■■■□□ 2.01
SRRT-204ENST00000448764 RAD54L2Q9Y4B4 1467 aa27.58■■■□□ 2.01
SRRT-204ENST00000448764 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
SRRT-204ENST00000448764 GOLGA3Q08378 1498 aa27.5■■□□□ 1.99
SRRT-204ENST00000448764 ABCA5Q8WWZ7 1642 aa27.48■■□□□ 1.99
SRRT-204ENST00000448764 ERICH3Q5RHP9 1530 aa27.47■■□□□ 1.99
SRRT-204ENST00000448764 IFT140Q96RY7 1462 aa27.46■■□□□ 1.99
SRRT-204ENST00000448764 PRXQ9BXM0 1461 aa27.45■■□□□ 1.99
SRRT-204ENST00000448764 IGF1RP08069 1367 aa27.39■■□□□ 1.98
SRRT-204ENST00000448764 CUL7Q14999 1698 aa27.37■■□□□ 1.97
SRRT-204ENST00000448764 GAPVD1Q14C86 1478 aa27.36■■□□□ 1.97
SRRT-204ENST00000448764 TNIKQ9UKE5 1360 aa27.36■■□□□ 1.97
SRRT-204ENST00000448764 RAPGEF2Q9Y4G8 1499 aa27.35■■□□□ 1.97
SRRT-204ENST00000448764 TDRD9Q8NDG6 1382 aaKnown RBP27.31■■□□□ 1.96
SRRT-204ENST00000448764 EHMT2Q96KQ7 1210 aa27.3■■□□□ 1.96
SRRT-204ENST00000448764 PBRM1Q86U86 1689 aa27.29■■□□□ 1.96
SRRT-204ENST00000448764 CARMIL1Q5VZK9 1371 aa27.28■■□□□ 1.96
SRRT-204ENST00000448764 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
SRRT-204ENST00000448764 EIF4G3O43432 1585 aaKnown RBP27.22■■□□□ 1.95
SRRT-204ENST00000448764 ZNF608Q9ULD9 1512 aaPredicted RBP27.2■■□□□ 1.95
SRRT-204ENST00000448764 GRIN2BQ13224 1484 aa27.2■■□□□ 1.95
SRRT-204ENST00000448764 AQRO60306 1485 aaKnown RBP eCLIP27.19■■□□□ 1.941e-9■■■■■ 30.5
SRRT-204ENST00000448764 CEP162Q5TB80 1403 aa27.16■■□□□ 1.94
SRRT-204ENST00000448764 ADAMTS12P58397 1594 aa27.12■■□□□ 1.93
SRRT-204ENST00000448764 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
SRRT-204ENST00000448764 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
SRRT-204ENST00000448764 CTTNBP2Q8WZ74 1663 aa27.03■■□□□ 1.92
SRRT-204ENST00000448764 CLIP1P30622 1438 aa27.01■■□□□ 1.91
SRRT-204ENST00000448764 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
SRRT-204ENST00000448764 SYNJ2O15056 1496 aa26.9■■□□□ 1.9
SRRT-204ENST00000448764 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
SRRT-204ENST00000448764 EFCAB5A4FU69 1503 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms