RNA–Protein interactions for RNA: ENST00000448541.1

AC006003.1-201, humanhuman

TSL 4 BASIC

Gene AC006003.1, Length 613 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006003.1-201ENST00000448541 NISCHQ9Y2I1 1504 aa36.93■■■■□ 3.5
AC006003.1-201ENST00000448541 ABCC9O60706 1549 aa33.36■■■□□ 2.93
AC006003.1-201ENST00000448541 CCDC180Q9P1Z9 1646 aa33.13■■■□□ 2.89
AC006003.1-201ENST00000448541 RB1CC1Q8TDY2 1594 aa31.62■■■□□ 2.65
AC006003.1-201ENST00000448541 DNAJC5BQ9UF47 199 aa31.49■■■□□ 2.63
AC006003.1-201ENST00000448541 NACADO15069 1562 aa31.37■■■□□ 2.61
AC006003.1-201ENST00000448541 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
AC006003.1-201ENST00000448541 PABPN1Q86U42 306 aaKnown RBP eCLIP31.06■■■□□ 2.56
AC006003.1-201ENST00000448541 UNC13AQ9UPW8 1703 aa30.94■■■□□ 2.54
AC006003.1-201ENST00000448541 MYO15BQ96JP2 1530 aa30.89■■■□□ 2.54
AC006003.1-201ENST00000448541 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
AC006003.1-201ENST00000448541 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
AC006003.1-201ENST00000448541 DCAF1Q9Y4B6 1507 aa30.46■■■□□ 2.47
AC006003.1-201ENST00000448541 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
AC006003.1-201ENST00000448541 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
AC006003.1-201ENST00000448541 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
AC006003.1-201ENST00000448541 CECR2Q9BXF3 1484 aa30.04■■■□□ 2.4
AC006003.1-201ENST00000448541 EIF4G1Q04637 1599 aaKnown RBP30.01■■■□□ 2.39
AC006003.1-201ENST00000448541 NCAPD3P42695 1498 aa28.99■■■□□ 2.23
AC006003.1-201ENST00000448541 DNAJC5Q9H3Z4 198 aa28.92■■■□□ 2.22
AC006003.1-201ENST00000448541 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
AC006003.1-201ENST00000448541 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
AC006003.1-201ENST00000448541 SMARCA2P51531 1590 aa28.76■■■□□ 2.19
AC006003.1-201ENST00000448541 ERCC6Q03468 1493 aa28.76■■■□□ 2.19
AC006003.1-201ENST00000448541 HMGXB3Q12766 1538 aa28.75■■■□□ 2.19
AC006003.1-201ENST00000448541 CUX2O14529 1486 aa28.75■■■□□ 2.19
AC006003.1-201ENST00000448541 NESP48681 1621 aa28.65■■■□□ 2.18
AC006003.1-201ENST00000448541 BAZ1AQ9NRL2 1556 aaPredicted RBP28.63■■■□□ 2.17
AC006003.1-201ENST00000448541 BAZ1BQ9UIG0 1483 aaKnown RBP28.59■■■□□ 2.17
AC006003.1-201ENST00000448541 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
AC006003.1-201ENST00000448541 MROH2BQ7Z745 1585 aa28.49■■■□□ 2.15
AC006003.1-201ENST00000448541 THOC2Q8NI27 1593 aaKnown RBP28.35■■■□□ 2.13
AC006003.1-201ENST00000448541 LAMC3Q9Y6N6 1575 aa28.33■■■□□ 2.13
AC006003.1-201ENST00000448541 KIF21AQ7Z4S6 1674 aa28.22■■■□□ 2.11
AC006003.1-201ENST00000448541 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
AC006003.1-201ENST00000448541 WIZO95785 1651 aa28.13■■■□□ 2.09
AC006003.1-201ENST00000448541 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
AC006003.1-201ENST00000448541 MRC2Q9UBG0 1479 aa27.97■■■□□ 2.07
AC006003.1-201ENST00000448541 WDR62O43379 1518 aa27.92■■■□□ 2.06
AC006003.1-201ENST00000448541 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
AC006003.1-201ENST00000448541 CEP164Q9UPV0 1460 aa27.82■■■□□ 2.04
AC006003.1-201ENST00000448541 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
AC006003.1-201ENST00000448541 CFTRP13569 1480 aa27.77■■■□□ 2.04
AC006003.1-201ENST00000448541 TOP2AP11388 1531 aaKnown RBP27.73■■■□□ 2.03
AC006003.1-201ENST00000448541 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
AC006003.1-201ENST00000448541 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
AC006003.1-201ENST00000448541 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
AC006003.1-201ENST00000448541 OSCARQ8IYS5 282 aa27.41■■□□□ 1.98
AC006003.1-201ENST00000448541 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
AC006003.1-201ENST00000448541 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
AC006003.1-201ENST00000448541 TOPBP1Q92547 1522 aa27.26■■□□□ 1.96
AC006003.1-201ENST00000448541 IFT140Q96RY7 1462 aa27.26■■□□□ 1.95
AC006003.1-201ENST00000448541 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
AC006003.1-201ENST00000448541 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
AC006003.1-201ENST00000448541 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
AC006003.1-201ENST00000448541 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
AC006003.1-201ENST00000448541 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
AC006003.1-201ENST00000448541 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
AC006003.1-201ENST00000448541 TARBP1Q13395 1621 aaKnown RBP27.04■■□□□ 1.92
AC006003.1-201ENST00000448541 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.92
AC006003.1-201ENST00000448541 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
AC006003.1-201ENST00000448541 POLA1P09884 1462 aaPredicted RBP26.98■■□□□ 1.91
AC006003.1-201ENST00000448541 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
AC006003.1-201ENST00000448541 CHD1O14646 1710 aa26.91■■□□□ 1.9
AC006003.1-201ENST00000448541 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
AC006003.1-201ENST00000448541 SOGA1O94964 1423 aa26.83■■□□□ 1.89
AC006003.1-201ENST00000448541 FBLN2P98095 1184 aa26.83■■□□□ 1.89
AC006003.1-201ENST00000448541 CYB5RLQ6IPT4 315 aa26.81■■□□□ 1.88
AC006003.1-201ENST00000448541 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
AC006003.1-201ENST00000448541 CUX1P39880 1505 aa26.77■■□□□ 1.88
AC006003.1-201ENST00000448541 ARAP1Q96P48 1450 aa26.76■■□□□ 1.87
AC006003.1-201ENST00000448541 SNAPC4Q5SXM2 1469 aa26.74■■□□□ 1.87
AC006003.1-201ENST00000448541 WDR97A6NE52 1622 aa26.67■■□□□ 1.86
AC006003.1-201ENST00000448541 CLASP1Q7Z460 1538 aa26.64■■□□□ 1.85
AC006003.1-201ENST00000448541 GRIN2BQ13224 1484 aa26.61■■□□□ 1.85
AC006003.1-201ENST00000448541 MAGI1Q96QZ7 1491 aaPredicted RBP26.61■■□□□ 1.85
AC006003.1-201ENST00000448541 CHMP7Q8WUX9 453 aaPredicted RBP26.59■■□□□ 1.85
AC006003.1-201ENST00000448541 SYNJ1O43426 1573 aa26.54■■□□□ 1.84
AC006003.1-201ENST00000448541 SYNJ2O15056 1496 aa26.54■■□□□ 1.84
AC006003.1-201ENST00000448541 TRHP20396 242 aaPredicted RBP26.53■■□□□ 1.84
AC006003.1-201ENST00000448541 GAPVD1Q14C86 1478 aa26.51■■□□□ 1.83
AC006003.1-201ENST00000448541 PBRM1Q86U86 1689 aa26.49■■□□□ 1.83
AC006003.1-201ENST00000448541 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
AC006003.1-201ENST00000448541 ABCA10Q8WWZ4 1543 aa26.46■■□□□ 1.83
AC006003.1-201ENST00000448541 ABCA5Q8WWZ7 1642 aa26.44■■□□□ 1.82
AC006003.1-201ENST00000448541 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
AC006003.1-201ENST00000448541 GRIN2AQ12879 1464 aa26.28■■□□□ 1.8
AC006003.1-201ENST00000448541 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
AC006003.1-201ENST00000448541 ADAMTS12P58397 1594 aa26.26■■□□□ 1.79
AC006003.1-201ENST00000448541 ERCC6L2Q5T890 1561 aa26.26■■□□□ 1.79
AC006003.1-201ENST00000448541 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
AC006003.1-201ENST00000448541 CEP170Q5SW79 1584 aa26.22■■□□□ 1.79
AC006003.1-201ENST00000448541 NUP160Q12769 1436 aa26.22■■□□□ 1.79
AC006003.1-201ENST00000448541 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
AC006003.1-201ENST00000448541 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
AC006003.1-201ENST00000448541 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
AC006003.1-201ENST00000448541 PRG4Q92954 1404 aaPredicted RBP25.97■■□□□ 1.75
AC006003.1-201ENST00000448541 JPH4Q96JJ6 628 aa25.92■■□□□ 1.74
AC006003.1-201ENST00000448541 RUSC2Q8N2Y8 1516 aa25.89■■□□□ 1.74
AC006003.1-201ENST00000448541 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms