RNA–Protein interactions for RNA: ENST00000447976.1

AC004997.1-205, humanhuman

TSL 2 BASIC

Gene AC004997.1, Length 1,851 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004997.1-205ENST00000447976 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
AC004997.1-205ENST00000447976 CCDC180Q9P1Z9 1646 aa28.17■■■□□ 2.1
AC004997.1-205ENST00000447976 ZCCHC6Q5VYS8 1495 aaKnown RBP27.11■■□□□ 1.93
AC004997.1-205ENST00000447976 DCAF1Q9Y4B6 1507 aa26.68■■□□□ 1.86
AC004997.1-205ENST00000447976 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
AC004997.1-205ENST00000447976 ABCC9O60706 1549 aa26.62■■□□□ 1.85
AC004997.1-205ENST00000447976 MYO15BQ96JP2 1530 aa26.36■■□□□ 1.81
AC004997.1-205ENST00000447976 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
AC004997.1-205ENST00000447976 NACADO15069 1562 aa26.21■■□□□ 1.79
AC004997.1-205ENST00000447976 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
AC004997.1-205ENST00000447976 SCRIBQ14160 1630 aa25.9■■□□□ 1.74
AC004997.1-205ENST00000447976 UNC13AQ9UPW8 1703 aa25.49■■□□□ 1.67
AC004997.1-205ENST00000447976 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
AC004997.1-205ENST00000447976 BICRAQ9NZM4 1560 aa25.21■■□□□ 1.63
AC004997.1-205ENST00000447976 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
AC004997.1-205ENST00000447976 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
AC004997.1-205ENST00000447976 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
AC004997.1-205ENST00000447976 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
AC004997.1-205ENST00000447976 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
AC004997.1-205ENST00000447976 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
AC004997.1-205ENST00000447976 WIZO95785 1651 aa24.74■■□□□ 1.55
AC004997.1-205ENST00000447976 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
AC004997.1-205ENST00000447976 TOP2AP11388 1531 aaKnown RBP24.49■■□□□ 1.51
AC004997.1-205ENST00000447976 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
AC004997.1-205ENST00000447976 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.5
AC004997.1-205ENST00000447976 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
AC004997.1-205ENST00000447976 BAZ1BQ9UIG0 1483 aaKnown RBP24.27■■□□□ 1.48
AC004997.1-205ENST00000447976 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
AC004997.1-205ENST00000447976 CHIC1Q5VXU3 224 aa24.21■■□□□ 1.47
AC004997.1-205ENST00000447976 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
AC004997.1-205ENST00000447976 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
AC004997.1-205ENST00000447976 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
AC004997.1-205ENST00000447976 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
AC004997.1-205ENST00000447976 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
AC004997.1-205ENST00000447976 CFTRP13569 1480 aa23.65■■□□□ 1.38
AC004997.1-205ENST00000447976 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
AC004997.1-205ENST00000447976 PRDM2Q13029 1718 aa23.57■■□□□ 1.36
AC004997.1-205ENST00000447976 WRNQ14191 1432 aaPredicted RBP eCLIP23.56■■□□□ 1.36
AC004997.1-205ENST00000447976 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
AC004997.1-205ENST00000447976 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
AC004997.1-205ENST00000447976 LAMC3Q9Y6N6 1575 aa23.38■■□□□ 1.33
AC004997.1-205ENST00000447976 TOP2BQ02880 1626 aa23.37■■□□□ 1.33
AC004997.1-205ENST00000447976 NESP48681 1621 aa23.37■■□□□ 1.33
AC004997.1-205ENST00000447976 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
AC004997.1-205ENST00000447976 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
AC004997.1-205ENST00000447976 CUX1P39880 1505 aa23.32■■□□□ 1.32
AC004997.1-205ENST00000447976 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
AC004997.1-205ENST00000447976 LOC105371045A0A1W2PR82 267 aa23.28■■□□□ 1.32
AC004997.1-205ENST00000447976 SOGA1O94964 1423 aa23.25■■□□□ 1.31
AC004997.1-205ENST00000447976 EEA1Q15075 1411 aa23.22■■□□□ 1.31
AC004997.1-205ENST00000447976 PDS5BQ9NTI5 1447 aa23.19■■□□□ 1.3
AC004997.1-205ENST00000447976 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
AC004997.1-205ENST00000447976 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
AC004997.1-205ENST00000447976 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
AC004997.1-205ENST00000447976 KIF21AQ7Z4S6 1674 aa23.11■■□□□ 1.29
AC004997.1-205ENST00000447976 CSRNP3Q8WYN3 585 aa23.08■■□□□ 1.29
AC004997.1-205ENST00000447976 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
AC004997.1-205ENST00000447976 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
AC004997.1-205ENST00000447976 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
AC004997.1-205ENST00000447976 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
AC004997.1-205ENST00000447976 KIF27Q86VH2 1401 aa22.97■■□□□ 1.27
AC004997.1-205ENST00000447976 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
AC004997.1-205ENST00000447976 KIF21BO75037 1637 aa22.93■■□□□ 1.26
AC004997.1-205ENST00000447976 CUX2O14529 1486 aa22.91■■□□□ 1.26
AC004997.1-205ENST00000447976 GOLGA3Q08378 1498 aa22.91■■□□□ 1.26
AC004997.1-205ENST00000447976 MRC2Q9UBG0 1479 aa22.91■■□□□ 1.26
AC004997.1-205ENST00000447976 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
AC004997.1-205ENST00000447976 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
AC004997.1-205ENST00000447976 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
AC004997.1-205ENST00000447976 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
AC004997.1-205ENST00000447976 WDR97A6NE52 1622 aa22.8■■□□□ 1.24
AC004997.1-205ENST00000447976 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
AC004997.1-205ENST00000447976 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
AC004997.1-205ENST00000447976 UBTFP17480 764 aaKnown RBP22.79■■□□□ 1.24
AC004997.1-205ENST00000447976 WDR62O43379 1518 aa22.79■■□□□ 1.24
AC004997.1-205ENST00000447976 ERICH3Q5RHP9 1530 aa22.78■■□□□ 1.24
AC004997.1-205ENST00000447976 IGF1RP08069 1367 aa22.74■■□□□ 1.23
AC004997.1-205ENST00000447976 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
AC004997.1-205ENST00000447976 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
AC004997.1-205ENST00000447976 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
AC004997.1-205ENST00000447976 ABCA5Q8WWZ7 1642 aa22.69■■□□□ 1.22
AC004997.1-205ENST00000447976 CARMIL1Q5VZK9 1371 aa22.64■■□□□ 1.22
AC004997.1-205ENST00000447976 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.22
AC004997.1-205ENST00000447976 GAPVD1Q14C86 1478 aa22.62■■□□□ 1.21
AC004997.1-205ENST00000447976 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
AC004997.1-205ENST00000447976 CUL7Q14999 1698 aa22.61■■□□□ 1.21
AC004997.1-205ENST00000447976 CLIP1P30622 1438 aa22.54■■□□□ 1.2
AC004997.1-205ENST00000447976 PBRM1Q86U86 1689 aa22.53■■□□□ 1.2
AC004997.1-205ENST00000447976 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19
AC004997.1-205ENST00000447976 ZNF608Q9ULD9 1512 aaPredicted RBP22.49■■□□□ 1.19
AC004997.1-205ENST00000447976 GRIN2BQ13224 1484 aa22.45■■□□□ 1.19
AC004997.1-205ENST00000447976 EIF4G3O43432 1585 aaKnown RBP22.43■■□□□ 1.18
AC004997.1-205ENST00000447976 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
AC004997.1-205ENST00000447976 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
AC004997.1-205ENST00000447976 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
AC004997.1-205ENST00000447976 CTTNBP2Q8WZ74 1663 aa22.37■■□□□ 1.17
AC004997.1-205ENST00000447976 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
AC004997.1-205ENST00000447976 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
AC004997.1-205ENST00000447976 SNAPC4Q5SXM2 1469 aa22.31■■□□□ 1.16
AC004997.1-205ENST00000447976 ARHGAP35Q9NRY4 1499 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms