RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.61
SNHG3-203ENST00000447507 CHIC1Q5VXU3 224 aa10.52□□□□□ -0.73
SNHG3-203ENST00000447507 POTEDQ86YR6 584 aa10.45□□□□□ -0.74
SNHG3-203ENST00000447507 SENP3Q9H4L4 574 aaPredicted RBP9.79□□□□□ -0.84
SNHG3-203ENST00000447507 PHF23Q9BUL5 403 aaPredicted RBP9.47□□□□□ -0.89
SNHG3-203ENST00000447507 FOXD1Q16676 465 aa9.18□□□□□ -0.94
SNHG3-203ENST00000447507 MSH5O43196 834 aa9.06□□□□□ -0.96
SNHG3-203ENST00000447507 PIAS4Q8N2W9 510 aaPredicted RBP8.33□□□□□ -1.08
SNHG3-203ENST00000447507 CACNB1Q02641 598 aaPredicted RBP8.29□□□□□ -1.08
SNHG3-203ENST00000447507 POTEHQ6S545 545 aa8□□□□□ -1.13
SNHG3-203ENST00000447507 PPP6R1Q9UPN7 881 aa7.79□□□□□ -1.16
SNHG3-203ENST00000447507 ADRA2BP18089 450 aa7.68□□□□□ -1.18
SNHG3-203ENST00000447507 RNF39Q9H2S5 420 aa7.61□□□□□ -1.19
SNHG3-203ENST00000447507 DMRT2Q9Y5R5 561 aa7.61□□□□□ -1.19
SNHG3-203ENST00000447507 C1QBPQ07021 282 aaKnown RBP7.47□□□□□ -1.21
SNHG3-203ENST00000447507 PLPPR3Q6T4P5 718 aa7.35□□□□□ -1.23
SNHG3-203ENST00000447507 MAPK8IP2Q13387 824 aaPredicted RBP7.34□□□□□ -1.23
SNHG3-203ENST00000447507 DCAF8L1A6NGE4 600 aa7.21□□□□□ -1.26
SNHG3-203ENST00000447507 SCAF1Q9H7N4 1312 aaKnown RBP7.15□□□□□ -1.26
SNHG3-203ENST00000447507 SP7Q8TDD2 431 aaPredicted RBP7.05□□□□□ -1.28
SNHG3-203ENST00000447507 DNAJC5BQ9UF47 199 aa7.03□□□□□ -1.28
SNHG3-203ENST00000447507 HOXD11P31277 338 aaPredicted RBP6.96□□□□□ -1.3
SNHG3-203ENST00000447507 PLSCR2Q9NRY7 297 aa6.93□□□□□ -1.3
SNHG3-203ENST00000447507 DSG3P32926 999 aa6.77□□□□□ -1.33
SNHG3-203ENST00000447507 CHRDL2Q6WN34 429 aa6.73□□□□□ -1.33
SNHG3-203ENST00000447507 RNF216Q9NWF9 866 aaPredicted RBP6.63□□□□□ -1.35
SNHG3-203ENST00000447507 LHX8Q68G74 356 aa6.57□□□□□ -1.36
SNHG3-203ENST00000447507 RBM42Q9BTD8 480 aaKnown RBP6.55□□□□□ -1.36
SNHG3-203ENST00000447507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNHG3-203ENST00000447507 CAPN15O75808 1086 aa6.52□□□□□ -1.37
SNHG3-203ENST00000447507 SPINK5Q9NQ38 1064 aaPredicted RBP6.48□□□□□ -1.37
SNHG3-203ENST00000447507 HAX1O00165 279 aa6.47□□□□□ -1.37
SNHG3-203ENST00000447507 CNKSR2Q8WXI2 1034 aa6.42□□□□□ -1.38
SNHG3-203ENST00000447507 PIP4P2Q8N4L2 257 aa6.35□□□□□ -1.39
SNHG3-203ENST00000447507 U3KPZ7 1027 aaPredicted RBP6.32□□□□□ -1.4
SNHG3-203ENST00000447507 PCDH10Q9P2E7 1040 aa6.3□□□□□ -1.4
SNHG3-203ENST00000447507 EVX2Q03828 476 aa6.29□□□□□ -1.4
SNHG3-203ENST00000447507 PPP4R3CPQ6ZMV5 832 aa6.27□□□□□ -1.41
SNHG3-203ENST00000447507 POTEMA6NI47 508 aa6.24□□□□□ -1.41
SNHG3-203ENST00000447507 ABCB7O75027 752 aa6.24□□□□□ -1.41
SNHG3-203ENST00000447507 ZNF219Q9P2Y4 722 aaPredicted RBP6.22□□□□□ -1.41
SNHG3-203ENST00000447507 FXR2P51116 673 aaKnown RBP eCLIP6.19□□□□□ -1.42
SNHG3-203ENST00000447507 POTEGQ6S5H5 508 aa6.18□□□□□ -1.42
SNHG3-203ENST00000447507 TRHP20396 242 aaPredicted RBP6.16□□□□□ -1.42
SNHG3-203ENST00000447507 AKT1S1Q96B36 256 aa6.16□□□□□ -1.42
SNHG3-203ENST00000447507 GABBR2O75899 941 aa6.15□□□□□ -1.42
SNHG3-203ENST00000447507 APLP2Q06481 763 aa6.13□□□□□ -1.43
SNHG3-203ENST00000447507 REM2Q8IYK8 340 aaPredicted RBP6.06□□□□□ -1.44
SNHG3-203ENST00000447507 C19orf67A6NJJ6 358 aa6.03□□□□□ -1.44
SNHG3-203ENST00000447507 POTEIP0CG38 1075 aa6□□□□□ -1.45
SNHG3-203ENST00000447507 PITPNM1O00562 1244 aa5.99□□□□□ -1.45
SNHG3-203ENST00000447507 OTUD5Q96G74 571 aa5.97□□□□□ -1.45
SNHG3-203ENST00000447507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.87□□□□□ -1.47
SNHG3-203ENST00000447507 HNRNPUL2Q1KMD3 747 aaKnown RBP5.87□□□□□ -1.47
SNHG3-203ENST00000447507 CLCN6P51797 869 aa5.85□□□□□ -1.47
SNHG3-203ENST00000447507 PRKAR2AP13861 404 aaKnown RBP5.82□□□□□ -1.48
SNHG3-203ENST00000447507 NCBP3Q53F19 620 aaKnown RBP5.82□□□□□ -1.48
SNHG3-203ENST00000447507 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
SNHG3-203ENST00000447507 POLA2Q14181 598 aa5.79□□□□□ -1.48
SNHG3-203ENST00000447507 SAMD1Q6SPF0 538 aaPredicted RBP5.77□□□□□ -1.49
SNHG3-203ENST00000447507 POTEB2H3BUK9 544 aa5.76□□□□□ -1.49
SNHG3-203ENST00000447507 DCBLD2Q96PD2 775 aa5.76□□□□□ -1.49
SNHG3-203ENST00000447507 NPM3O75607 178 aaKnown RBP5.72□□□□□ -1.49
SNHG3-203ENST00000447507 MMRN1Q13201 1228 aa5.71□□□□□ -1.5
SNHG3-203ENST00000447507 CDAN1Q8IWY9 1227 aa5.71□□□□□ -1.5
SNHG3-203ENST00000447507 ZBTB12Q9Y330 459 aaPredicted RBP5.7□□□□□ -1.5
SNHG3-203ENST00000447507 OSCARQ8IYS5 282 aa5.65□□□□□ -1.5
SNHG3-203ENST00000447507 FAM163AQ96GL9 167 aaPredicted RBP5.65□□□□□ -1.5
SNHG3-203ENST00000447507 SLC4A2P04920 1241 aa5.64□□□□□ -1.51
SNHG3-203ENST00000447507 MAMSTRQ6ZN01 415 aa5.61□□□□□ -1.51
SNHG3-203ENST00000447507 SPNS2Q8IVW8 549 aa5.61□□□□□ -1.51
SNHG3-203ENST00000447507 CD44P16070 742 aaKnown RBP5.58□□□□□ -1.52
SNHG3-203ENST00000447507 KCNA4P22459 653 aa5.57□□□□□ -1.52
SNHG3-203ENST00000447507 SPDYE1Q8NFV5 336 aaPredicted RBP5.55□□□□□ -1.52
SNHG3-203ENST00000447507 POTEJP0CG39 1038 aa5.51□□□□□ -1.53
SNHG3-203ENST00000447507 ZNF579Q8NAF0 562 aaKnown RBP5.51□□□□□ -1.53
SNHG3-203ENST00000447507 CHADLQ6NUI6 762 aa5.5□□□□□ -1.53
SNHG3-203ENST00000447507 CLEC11AQ9Y240 323 aa5.5□□□□□ -1.53
SNHG3-203ENST00000447507 SCUBE2Q9NQ36 999 aa5.49□□□□□ -1.53
SNHG3-203ENST00000447507 GALR2O43603 387 aaPredicted RBP5.44□□□□□ -1.54
SNHG3-203ENST00000447507 SPDYE2BA6NHP3 402 aa5.43□□□□□ -1.54
SNHG3-203ENST00000447507 SPDYE6P0CI01 402 aa5.43□□□□□ -1.54
SNHG3-203ENST00000447507 SPDYE2Q495Y8 402 aa5.43□□□□□ -1.54
SNHG3-203ENST00000447507 METRNQ9UJH8 293 aa5.42□□□□□ -1.54
SNHG3-203ENST00000447507 PELP1Q8IZL8 1130 aaKnown RBP5.41□□□□□ -1.54
SNHG3-203ENST00000447507 C7P10643 843 aa5.4□□□□□ -1.54
SNHG3-203ENST00000447507 SLC39A7Q92504 469 aa5.39□□□□□ -1.55
SNHG3-203ENST00000447507 FARP1Q9Y4F1 1045 aaPredicted RBP5.37□□□□□ -1.55
SNHG3-203ENST00000447507 ZRANB1Q9UGI0 708 aa5.34□□□□□ -1.55
SNHG3-203ENST00000447507 ST18O60284 1047 aa5.33□□□□□ -1.56
SNHG3-203ENST00000447507 PRR29P0C7W0 189 aa5.32□□□□□ -1.56
SNHG3-203ENST00000447507 ASTLQ6HA08 431 aaPredicted RBP5.32□□□□□ -1.56
SNHG3-203ENST00000447507 MYCNP04198 464 aaPredicted RBP5.31□□□□□ -1.56
SNHG3-203ENST00000447507 TMEM121BQ9BXQ6 578 aaPredicted RBP5.28□□□□□ -1.56
SNHG3-203ENST00000447507 SLC4A1APQ9BWU0 796 aaKnown RBP5.26□□□□□ -1.57
SNHG3-203ENST00000447507 ATMINO43313 823 aaPredicted RBP5.25□□□□□ -1.57
SNHG3-203ENST00000447507 SSUH2Q9Y2M2 353 aa5.24□□□□□ -1.57
SNHG3-203ENST00000447507 FOXD4L1Q9NU39 408 aa5.23□□□□□ -1.57
SNHG3-203ENST00000447507 POTEFA5A3E0 1075 aa5.18□□□□□ -1.58
SNHG3-203ENST00000447507 KRTAP3-3Q9BYR6 98 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms