RNA–Protein interactions for RNA: ENST00000447463.5

HDAC7-215, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-215ENST00000447463 NISCHQ9Y2I1 1504 aa33.13■■■□□ 2.89
HDAC7-215ENST00000447463 CCDC180Q9P1Z9 1646 aa29.75■■■□□ 2.35
HDAC7-215ENST00000447463 ABCC9O60706 1549 aa29.74■■■□□ 2.35
HDAC7-215ENST00000447463 RB1CC1Q8TDY2 1594 aa28.33■■■□□ 2.13
HDAC7-215ENST00000447463 NACADO15069 1562 aa28.13■■■□□ 2.09
HDAC7-215ENST00000447463 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
HDAC7-215ENST00000447463 DNAJC5BQ9UF47 199 aa27.9■■■□□ 2.06
HDAC7-215ENST00000447463 MYO15BQ96JP2 1530 aa27.75■■■□□ 2.03
HDAC7-215ENST00000447463 UNC13AQ9UPW8 1703 aa27.69■■■□□ 2.02
HDAC7-215ENST00000447463 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
HDAC7-215ENST00000447463 BICRAQ9NZM4 1560 aa27.49■■□□□ 1.99
HDAC7-215ENST00000447463 ZCCHC6Q5VYS8 1495 aaKnown RBP27.45■■□□□ 1.99
HDAC7-215ENST00000447463 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
HDAC7-215ENST00000447463 SHROOM4Q9ULL8 1493 aa27.15■■□□□ 1.94
HDAC7-215ENST00000447463 SCRIBQ14160 1630 aa27.09■■□□□ 1.93
HDAC7-215ENST00000447463 CC2D2AQ9P2K1 1620 aa26.88■■□□□ 1.89
HDAC7-215ENST00000447463 EIF4G1Q04637 1599 aaKnown RBP26.82■■□□□ 1.88
HDAC7-215ENST00000447463 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
HDAC7-215ENST00000447463 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
HDAC7-215ENST00000447463 ATAD2BQ9ULI0 1458 aa25.87■■□□□ 1.73
HDAC7-215ENST00000447463 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
HDAC7-215ENST00000447463 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
HDAC7-215ENST00000447463 HMGXB3Q12766 1538 aa25.78■■□□□ 1.72
HDAC7-215ENST00000447463 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
HDAC7-215ENST00000447463 ERCC6Q03468 1493 aa25.71■■□□□ 1.71
HDAC7-215ENST00000447463 CUX2O14529 1486 aa25.67■■□□□ 1.7
HDAC7-215ENST00000447463 DNAJC5Q9H3Z4 198 aa25.66■■□□□ 1.7
HDAC7-215ENST00000447463 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
HDAC7-215ENST00000447463 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
HDAC7-215ENST00000447463 NESP48681 1621 aa25.54■■□□□ 1.68
HDAC7-215ENST00000447463 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
HDAC7-215ENST00000447463 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.66
HDAC7-215ENST00000447463 THOC2Q8NI27 1593 aaKnown RBP25.31■■□□□ 1.64
HDAC7-215ENST00000447463 PDS5BQ9NTI5 1447 aa25.25■■□□□ 1.63
HDAC7-215ENST00000447463 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
HDAC7-215ENST00000447463 WIZO95785 1651 aa25.22■■□□□ 1.63
HDAC7-215ENST00000447463 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
HDAC7-215ENST00000447463 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
HDAC7-215ENST00000447463 RSF1Q96T23 1441 aaPredicted RBP24.98■■□□□ 1.59
HDAC7-215ENST00000447463 WDR62O43379 1518 aa24.96■■□□□ 1.59
HDAC7-215ENST00000447463 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
HDAC7-215ENST00000447463 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
HDAC7-215ENST00000447463 CFTRP13569 1480 aa24.89■■□□□ 1.57
HDAC7-215ENST00000447463 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
HDAC7-215ENST00000447463 URB2Q14146 1524 aaKnown RBP24.67■■□□□ 1.54
HDAC7-215ENST00000447463 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
HDAC7-215ENST00000447463 CCDC88BA6NC98 1476 aa24.62■■□□□ 1.53
HDAC7-215ENST00000447463 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
HDAC7-215ENST00000447463 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
HDAC7-215ENST00000447463 IFT140Q96RY7 1462 aa24.42■■□□□ 1.5
HDAC7-215ENST00000447463 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
HDAC7-215ENST00000447463 ABCC8Q09428 1581 aa24.37■■□□□ 1.49
HDAC7-215ENST00000447463 ZNF608Q9ULD9 1512 aaPredicted RBP24.36■■□□□ 1.49
HDAC7-215ENST00000447463 DNMBPQ6XZF7 1577 aa24.33■■□□□ 1.48
HDAC7-215ENST00000447463 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
HDAC7-215ENST00000447463 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
HDAC7-215ENST00000447463 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
HDAC7-215ENST00000447463 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
HDAC7-215ENST00000447463 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
HDAC7-215ENST00000447463 POLA1P09884 1462 aaPredicted RBP24.16■■□□□ 1.46
HDAC7-215ENST00000447463 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.469e-7■■■■□ 23.5
HDAC7-215ENST00000447463 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
HDAC7-215ENST00000447463 CHD1O14646 1710 aa24.07■■□□□ 1.44
HDAC7-215ENST00000447463 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
HDAC7-215ENST00000447463 SOGA1O94964 1423 aa24.05■■□□□ 1.44
HDAC7-215ENST00000447463 FGD5Q6ZNL6 1462 aa24■■□□□ 1.43
HDAC7-215ENST00000447463 FBLN2P98095 1184 aa24■■□□□ 1.43
HDAC7-215ENST00000447463 TDRD9Q8NDG6 1382 aaKnown RBP23.99■■□□□ 1.43
HDAC7-215ENST00000447463 CUX1P39880 1505 aa23.98■■□□□ 1.43
HDAC7-215ENST00000447463 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
HDAC7-215ENST00000447463 CYB5RLQ6IPT4 315 aa23.91■■□□□ 1.42
HDAC7-215ENST00000447463 SNAPC4Q5SXM2 1469 aa23.9■■□□□ 1.42
HDAC7-215ENST00000447463 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
HDAC7-215ENST00000447463 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
HDAC7-215ENST00000447463 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
HDAC7-215ENST00000447463 ARAP1Q96P48 1450 aa23.85■■□□□ 1.41
HDAC7-215ENST00000447463 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.41
HDAC7-215ENST00000447463 CLASP1Q7Z460 1538 aa23.79■■□□□ 1.4
HDAC7-215ENST00000447463 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
HDAC7-215ENST00000447463 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
HDAC7-215ENST00000447463 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
HDAC7-215ENST00000447463 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
HDAC7-215ENST00000447463 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
HDAC7-215ENST00000447463 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.39
HDAC7-215ENST00000447463 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.385e-6■■■■■ 29.2
HDAC7-215ENST00000447463 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
HDAC7-215ENST00000447463 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
HDAC7-215ENST00000447463 BIVM-ERCC5R4GMW8 1640 aa23.6■■□□□ 1.37
HDAC7-215ENST00000447463 GRIN2AQ12879 1464 aa23.54■■□□□ 1.36
HDAC7-215ENST00000447463 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
HDAC7-215ENST00000447463 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
HDAC7-215ENST00000447463 NUP160Q12769 1436 aa23.46■■□□□ 1.35
HDAC7-215ENST00000447463 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
HDAC7-215ENST00000447463 ERICH3Q5RHP9 1530 aa23.45■■□□□ 1.34
HDAC7-215ENST00000447463 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
HDAC7-215ENST00000447463 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
HDAC7-215ENST00000447463 PRG4Q92954 1404 aaPredicted RBP23.24■■□□□ 1.31
HDAC7-215ENST00000447463 JPH4Q96JJ6 628 aa23.22■■□□□ 1.31
HDAC7-215ENST00000447463 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
HDAC7-215ENST00000447463 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms