RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 NISCHQ9Y2I1 1504 aa39.56■■■■□ 3.92
SPTLC1P1-201ENST00000447199 CCDC180Q9P1Z9 1646 aa35.34■■■■□ 3.25
SPTLC1P1-201ENST00000447199 ABCC9O60706 1549 aa35.1■■■■□ 3.21
SPTLC1P1-201ENST00000447199 RB1CC1Q8TDY2 1594 aa33.51■■■□□ 2.96
SPTLC1P1-201ENST00000447199 NACADO15069 1562 aa33.38■■■□□ 2.93
SPTLC1P1-201ENST00000447199 DCAF8L2P0C7V8 631 aa33.14■■■□□ 2.9
SPTLC1P1-201ENST00000447199 MYO15BQ96JP2 1530 aa33.06■■■□□ 2.88
SPTLC1P1-201ENST00000447199 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
SPTLC1P1-201ENST00000447199 DNAJC5BQ9UF47 199 aa32.76■■■□□ 2.83
SPTLC1P1-201ENST00000447199 DCAF1Q9Y4B6 1507 aa32.73■■■□□ 2.83
SPTLC1P1-201ENST00000447199 UNC13AQ9UPW8 1703 aa32.72■■■□□ 2.83
SPTLC1P1-201ENST00000447199 PABPN1Q86U42 306 aaKnown RBP eCLIP32.71■■■□□ 2.83
SPTLC1P1-201ENST00000447199 BICRAQ9NZM4 1560 aa32.59■■■□□ 2.81
SPTLC1P1-201ENST00000447199 SCRIBQ14160 1630 aa32.19■■■□□ 2.74
SPTLC1P1-201ENST00000447199 SHROOM4Q9ULL8 1493 aa32.19■■■□□ 2.74
SPTLC1P1-201ENST00000447199 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
SPTLC1P1-201ENST00000447199 CC2D2AQ9P2K1 1620 aa31.72■■■□□ 2.67
SPTLC1P1-201ENST00000447199 CECR2Q9BXF3 1484 aa31.6■■■□□ 2.65
SPTLC1P1-201ENST00000447199 NCAPD3P42695 1498 aa30.85■■■□□ 2.53
SPTLC1P1-201ENST00000447199 ATAD2BQ9ULI0 1458 aa30.78■■■□□ 2.52
SPTLC1P1-201ENST00000447199 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
SPTLC1P1-201ENST00000447199 SMARCA2P51531 1590 aa30.67■■■□□ 2.5
SPTLC1P1-201ENST00000447199 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
SPTLC1P1-201ENST00000447199 HMGXB3Q12766 1538 aa30.63■■■□□ 2.49
SPTLC1P1-201ENST00000447199 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
SPTLC1P1-201ENST00000447199 MROH2BQ7Z745 1585 aa30.48■■■□□ 2.47
SPTLC1P1-201ENST00000447199 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
SPTLC1P1-201ENST00000447199 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
SPTLC1P1-201ENST00000447199 NESP48681 1621 aa30.24■■■□□ 2.43
SPTLC1P1-201ENST00000447199 CUX2O14529 1486 aa30.18■■■□□ 2.42
SPTLC1P1-201ENST00000447199 WIZO95785 1651 aa30.08■■■□□ 2.41
SPTLC1P1-201ENST00000447199 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
SPTLC1P1-201ENST00000447199 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
SPTLC1P1-201ENST00000447199 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
SPTLC1P1-201ENST00000447199 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
SPTLC1P1-201ENST00000447199 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
SPTLC1P1-201ENST00000447199 DNAJC5Q9H3Z4 198 aa29.87■■■□□ 2.37
SPTLC1P1-201ENST00000447199 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
SPTLC1P1-201ENST00000447199 TOP2AP11388 1531 aaKnown RBP29.76■■■□□ 2.35
SPTLC1P1-201ENST00000447199 CFTRP13569 1480 aa29.63■■■□□ 2.33
SPTLC1P1-201ENST00000447199 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
SPTLC1P1-201ENST00000447199 WDR62O43379 1518 aa29.55■■■□□ 2.32
SPTLC1P1-201ENST00000447199 FANCD2Q9BXW9 1451 aa29.55■■■□□ 2.32
SPTLC1P1-201ENST00000447199 CEP164Q9UPV0 1460 aa29.54■■■□□ 2.32
SPTLC1P1-201ENST00000447199 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
SPTLC1P1-201ENST00000447199 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
SPTLC1P1-201ENST00000447199 PRDM2Q13029 1718 aa29.24■■■□□ 2.27
SPTLC1P1-201ENST00000447199 TOPBP1Q92547 1522 aa29.02■■■□□ 2.24
SPTLC1P1-201ENST00000447199 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
SPTLC1P1-201ENST00000447199 ABCC8Q09428 1581 aa28.95■■■□□ 2.22
SPTLC1P1-201ENST00000447199 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
SPTLC1P1-201ENST00000447199 ZNF608Q9ULD9 1512 aaPredicted RBP28.89■■■□□ 2.22
SPTLC1P1-201ENST00000447199 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
SPTLC1P1-201ENST00000447199 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
SPTLC1P1-201ENST00000447199 TARBP1Q13395 1621 aaKnown RBP28.75■■■□□ 2.19
SPTLC1P1-201ENST00000447199 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
SPTLC1P1-201ENST00000447199 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
SPTLC1P1-201ENST00000447199 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.18
SPTLC1P1-201ENST00000447199 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
SPTLC1P1-201ENST00000447199 CUX1P39880 1505 aa28.62■■■□□ 2.17
SPTLC1P1-201ENST00000447199 SOGA1O94964 1423 aa28.6■■■□□ 2.17
SPTLC1P1-201ENST00000447199 TRIM41Q8WV44 630 aa28.58■■■□□ 2.17
SPTLC1P1-201ENST00000447199 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
SPTLC1P1-201ENST00000447199 TDRD9Q8NDG6 1382 aaKnown RBP28.51■■■□□ 2.16
SPTLC1P1-201ENST00000447199 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
SPTLC1P1-201ENST00000447199 CHD1O14646 1710 aa28.4■■■□□ 2.14
SPTLC1P1-201ENST00000447199 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
SPTLC1P1-201ENST00000447199 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
SPTLC1P1-201ENST00000447199 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
SPTLC1P1-201ENST00000447199 ARHGEF11O15085 1522 aa28.37■■■□□ 2.13
SPTLC1P1-201ENST00000447199 SNAPC4Q5SXM2 1469 aa28.36■■■□□ 2.13
SPTLC1P1-201ENST00000447199 FBLN2P98095 1184 aa28.33■■■□□ 2.13
SPTLC1P1-201ENST00000447199 GRIN2BQ13224 1484 aa28.33■■■□□ 2.13
SPTLC1P1-201ENST00000447199 ABCA10Q8WWZ4 1543 aa28.31■■■□□ 2.12
SPTLC1P1-201ENST00000447199 MAGI1Q96QZ7 1491 aaPredicted RBP28.3■■■□□ 2.12
SPTLC1P1-201ENST00000447199 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
SPTLC1P1-201ENST00000447199 TOP2BQ02880 1626 aa28.22■■■□□ 2.11
SPTLC1P1-201ENST00000447199 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
SPTLC1P1-201ENST00000447199 WRNQ14191 1432 aaPredicted RBP eCLIP28.22■■■□□ 2.11
SPTLC1P1-201ENST00000447199 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
SPTLC1P1-201ENST00000447199 CHMP7Q8WUX9 453 aaPredicted RBP28.2■■■□□ 2.1
SPTLC1P1-201ENST00000447199 BIVM-ERCC5R4GMW8 1640 aa28.2■■■□□ 2.1
SPTLC1P1-201ENST00000447199 SYNJ1O43426 1573 aa28.19■■■□□ 2.1
SPTLC1P1-201ENST00000447199 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
SPTLC1P1-201ENST00000447199 PBRM1Q86U86 1689 aa28.17■■■□□ 2.1
SPTLC1P1-201ENST00000447199 ARAP1Q96P48 1450 aa28.13■■■□□ 2.09
SPTLC1P1-201ENST00000447199 CYB5RLQ6IPT4 315 aa28.1■■■□□ 2.09
SPTLC1P1-201ENST00000447199 ADAMTS12P58397 1594 aa27.98■■■□□ 2.07
SPTLC1P1-201ENST00000447199 GRIN2AQ12879 1464 aa27.97■■■□□ 2.07
SPTLC1P1-201ENST00000447199 ERICH3Q5RHP9 1530 aa27.93■■■□□ 2.06
SPTLC1P1-201ENST00000447199 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
SPTLC1P1-201ENST00000447199 NUP160Q12769 1436 aa27.9■■■□□ 2.06
SPTLC1P1-201ENST00000447199 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
SPTLC1P1-201ENST00000447199 ERCC6L2Q5T890 1561 aa27.74■■■□□ 2.03
SPTLC1P1-201ENST00000447199 SHROOM2Q13796 1616 aa27.73■■■□□ 2.03
SPTLC1P1-201ENST00000447199 IGF1RP08069 1367 aa27.67■■■□□ 2.02
SPTLC1P1-201ENST00000447199 KIF27Q86VH2 1401 aa27.66■■■□□ 2.02
SPTLC1P1-201ENST00000447199 TRHP20396 242 aaPredicted RBP27.65■■■□□ 2.02
SPTLC1P1-201ENST00000447199 RUSC2Q8N2Y8 1516 aa27.58■■■□□ 2.01
SPTLC1P1-201ENST00000447199 JPH4Q96JJ6 628 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms