RNA–Protein interactions for RNA: ENST00000446746.5

BDH1-209, Transcript of 3-hydroxybutyrate dehydrogenase 1, humanhuman

TSL 3

Gene BDH1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDH1-209ENST00000446746 NISCHQ9Y2I1 1504 aa49.84■■■■■ 5.57
BDH1-209ENST00000446746 ABCC9O60706 1549 aa44.89■■■■■ 4.78
BDH1-209ENST00000446746 CCDC180Q9P1Z9 1646 aa44.85■■■■■ 4.77
BDH1-209ENST00000446746 RB1CC1Q8TDY2 1594 aa42.73■■■■■ 4.43
BDH1-209ENST00000446746 NACADO15069 1562 aa42.39■■■■■ 4.38
BDH1-209ENST00000446746 DNAJC5BQ9UF47 199 aa42.15■■■■■ 4.34
BDH1-209ENST00000446746 DCAF8L2P0C7V8 631 aa42.02■■■■■ 4.32
BDH1-209ENST00000446746 UNC13AQ9UPW8 1703 aa41.78■■■■■ 4.28
BDH1-209ENST00000446746 MYO15BQ96JP2 1530 aa41.77■■■■■ 4.28
BDH1-209ENST00000446746 PABPN1Q86U42 306 aaKnown RBP eCLIP41.71■■■■■ 4.273e-7■□□□□ 8.9
BDH1-209ENST00000446746 BICRAQ9NZM4 1560 aa41.46■■■■■ 4.23
BDH1-209ENST00000446746 ZCCHC6Q5VYS8 1495 aaKnown RBP41.3■■■■■ 4.2
BDH1-209ENST00000446746 DCAF1Q9Y4B6 1507 aa41.18■■■■■ 4.18
BDH1-209ENST00000446746 SHROOM4Q9ULL8 1493 aa40.95■■■■■ 4.15
BDH1-209ENST00000446746 SCRIBQ14160 1630 aa40.82■■■■■ 4.12
BDH1-209ENST00000446746 CC2D2AQ9P2K1 1620 aa40.58■■■■■ 4.09
BDH1-209ENST00000446746 EIF4G1Q04637 1599 aaKnown RBP40.47■■■■■ 4.07
BDH1-209ENST00000446746 CECR2Q9BXF3 1484 aa40.46■■■■■ 4.07
BDH1-209ENST00000446746 NCAPD3P42695 1498 aa39.11■■■■□ 3.85
BDH1-209ENST00000446746 ATAD2BQ9ULI0 1458 aa38.96■■■■□ 3.83
BDH1-209ENST00000446746 SMARCA4P51532 1647 aa38.93■■■■□ 3.82
BDH1-209ENST00000446746 SMARCA2P51531 1590 aa38.89■■■■□ 3.82
BDH1-209ENST00000446746 HMGXB3Q12766 1538 aa38.85■■■■□ 3.81
BDH1-209ENST00000446746 DNAJC5Q9H3Z4 198 aa38.83■■■■□ 3.81
BDH1-209ENST00000446746 ERCC6Q03468 1493 aa38.79■■■■□ 3.8
BDH1-209ENST00000446746 CUX2O14529 1486 aa38.78■■■■□ 3.8
BDH1-209ENST00000446746 BAZ1AQ9NRL2 1556 aaPredicted RBP38.72■■■■□ 3.79
BDH1-209ENST00000446746 BAZ1BQ9UIG0 1483 aaKnown RBP38.6■■■■□ 3.77
BDH1-209ENST00000446746 PEG3Q9GZU2 1588 aa38.57■■■■□ 3.76
BDH1-209ENST00000446746 NESP48681 1621 aa38.52■■■■□ 3.76
BDH1-209ENST00000446746 MROH2BQ7Z745 1585 aa38.39■■■■□ 3.74
BDH1-209ENST00000446746 LAMC3Q9Y6N6 1575 aa38.29■■■■□ 3.72
BDH1-209ENST00000446746 THOC2Q8NI27 1593 aaKnown RBP38.22■■■■□ 3.71
BDH1-209ENST00000446746 KIF21AQ7Z4S6 1674 aa38.08■■■■□ 3.69
BDH1-209ENST00000446746 PDS5BQ9NTI5 1447 aa38.04■■■■□ 3.68
BDH1-209ENST00000446746 WIZO95785 1651 aa37.95■■■■□ 3.66
BDH1-209ENST00000446746 CADPSQ9ULU8 1353 aa37.89■■■■□ 3.66
BDH1-209ENST00000446746 MRC2Q9UBG0 1479 aa37.73■■■■□ 3.63
BDH1-209ENST00000446746 WDR62O43379 1518 aa37.66■■■■□ 3.62
BDH1-209ENST00000446746 CEP164Q9UPV0 1460 aa37.56■■■■□ 3.6
BDH1-209ENST00000446746 RSF1Q96T23 1441 aaPredicted RBP37.53■■■■□ 3.6
BDH1-209ENST00000446746 FANCD2Q9BXW9 1451 aa37.49■■■■□ 3.59
BDH1-209ENST00000446746 TOP2AP11388 1531 aaKnown RBP37.47■■■■□ 3.59
BDH1-209ENST00000446746 CFTRP13569 1480 aa37.45■■■■□ 3.59
BDH1-209ENST00000446746 URB2Q14146 1524 aaKnown RBP37.19■■■■□ 3.54
BDH1-209ENST00000446746 PRDM2Q13029 1718 aa37.16■■■■□ 3.54
BDH1-209ENST00000446746 TRIM41Q8WV44 630 aa37.07■■■■□ 3.52
BDH1-209ENST00000446746 CCDC88BA6NC98 1476 aa37■■■■□ 3.51
BDH1-209ENST00000446746 OSCARQ8IYS5 282 aa36.91■■■■□ 3.5
BDH1-209ENST00000446746 IFT140Q96RY7 1462 aa36.81■■■■□ 3.48
BDH1-209ENST00000446746 TOPBP1Q92547 1522 aa36.77■■■■□ 3.48
BDH1-209ENST00000446746 ZNF608Q9ULD9 1512 aaPredicted RBP36.74■■■■□ 3.47
BDH1-209ENST00000446746 ABCC8Q09428 1581 aa36.7■■■■□ 3.46
BDH1-209ENST00000446746 DNMBPQ6XZF7 1577 aa36.65■■■■□ 3.46
BDH1-209ENST00000446746 EIF4G3O43432 1585 aaKnown RBP36.59■■■■□ 3.45
BDH1-209ENST00000446746 RIMBP3CA6NJZ7 1639 aa36.53■■■■□ 3.44
BDH1-209ENST00000446746 RIMBP3BA6NNM3 1639 aa36.53■■■■□ 3.44
BDH1-209ENST00000446746 RIMBP3Q9UFD9 1639 aa36.53■■■■□ 3.44
BDH1-209ENST00000446746 TARBP1Q13395 1621 aaKnown RBP36.47■■■■□ 3.43
BDH1-209ENST00000446746 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
BDH1-209ENST00000446746 POLA1P09884 1462 aaPredicted RBP36.38■■■■□ 3.41
BDH1-209ENST00000446746 AQRO60306 1485 aaKnown RBP eCLIP36.37■■■■□ 3.41
BDH1-209ENST00000446746 CHD1O14646 1710 aa36.34■■■■□ 3.41
BDH1-209ENST00000446746 RAD54L2Q9Y4B4 1467 aa36.22■■■■□ 3.39
BDH1-209ENST00000446746 SOGA1O94964 1423 aa36.18■■■■□ 3.38
BDH1-209ENST00000446746 FGD5Q6ZNL6 1462 aa36.14■■■■□ 3.38
BDH1-209ENST00000446746 WDR97A6NE52 1622 aa36.13■■■■□ 3.37
BDH1-209ENST00000446746 FBLN2P98095 1184 aa36.13■■■■□ 3.37
BDH1-209ENST00000446746 TDRD9Q8NDG6 1382 aaKnown RBP36.12■■■■□ 3.37
BDH1-209ENST00000446746 CUX1P39880 1505 aa36.08■■■■□ 3.37
BDH1-209ENST00000446746 CYB5RLQ6IPT4 315 aa36.05■■■■□ 3.36
BDH1-209ENST00000446746 SNAPC4Q5SXM2 1469 aa36.04■■■■□ 3.36
BDH1-209ENST00000446746 ARAP1Q96P48 1450 aa36.01■■■■□ 3.36
BDH1-209ENST00000446746 MAGI1Q96QZ7 1491 aaPredicted RBP35.95■■■■□ 3.35
BDH1-209ENST00000446746 GRIN2BQ13224 1484 aa35.92■■■■□ 3.34
BDH1-209ENST00000446746 CLASP1Q7Z460 1538 aa35.91■■■■□ 3.34
BDH1-209ENST00000446746 SYNJ1O43426 1573 aa35.89■■■■□ 3.34
BDH1-209ENST00000446746 CHMP7Q8WUX9 453 aaPredicted RBP35.86■■■■□ 3.33
BDH1-209ENST00000446746 PBRM1Q86U86 1689 aa35.82■■■■□ 3.33
BDH1-209ENST00000446746 SYNJ2O15056 1496 aa35.82■■■■□ 3.32
BDH1-209ENST00000446746 GAPVD1Q14C86 1478 aa35.76■■■■□ 3.32
BDH1-209ENST00000446746 ABCA10Q8WWZ4 1543 aa35.73■■■■□ 3.31
BDH1-209ENST00000446746 ABCA5Q8WWZ7 1642 aa35.72■■■■□ 3.31
BDH1-209ENST00000446746 SUPT5HO00267 1087 aaKnown RBP35.72■■■■□ 3.31
BDH1-209ENST00000446746 TRHP20396 242 aaPredicted RBP35.7■■■■□ 3.31
BDH1-209ENST00000446746 WRNQ14191 1432 aaPredicted RBP eCLIP35.54■■■■□ 3.28
BDH1-209ENST00000446746 BIVM-ERCC5R4GMW8 1640 aa35.52■■■■□ 3.28
BDH1-209ENST00000446746 TOP2BQ02880 1626 aa35.5■■■■□ 3.27
BDH1-209ENST00000446746 GRIN2AQ12879 1464 aa35.47■■■■□ 3.27
BDH1-209ENST00000446746 ADAMTS12P58397 1594 aa35.46■■■■□ 3.27
BDH1-209ENST00000446746 CEP170Q5SW79 1584 aa35.36■■■■□ 3.25
BDH1-209ENST00000446746 NUP160Q12769 1436 aa35.34■■■■□ 3.25
BDH1-209ENST00000446746 ERCC6L2Q5T890 1561 aa35.31■■■■□ 3.24
BDH1-209ENST00000446746 FHAD1B1AJZ9 1412 aa35.31■■■■□ 3.24
BDH1-209ENST00000446746 ERICH3Q5RHP9 1530 aa35.29■■■■□ 3.24
BDH1-209ENST00000446746 SHROOM2Q13796 1616 aa35.24■■■■□ 3.23
BDH1-209ENST00000446746 PRG4Q92954 1404 aaPredicted RBP34.99■■■■□ 3.19
BDH1-209ENST00000446746 RUSC2Q8N2Y8 1516 aa34.97■■■■□ 3.19
BDH1-209ENST00000446746 JPH4Q96JJ6 628 aa34.92■■■■□ 3.18
BDH1-209ENST00000446746 KIF13AQ9H1H9 1805 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms