RNA–Protein interactions for RNA: ENST00000446668.5

MANF-201, Transcript of mesencephalic astrocyte derived neurotrophic factor, humanhuman

TSL 3

Gene MANF, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MANF-201ENST00000446668 NISCHQ9Y2I1 1504 aa51.17■■■■■ 5.78
MANF-201ENST00000446668 CCDC180Q9P1Z9 1646 aa45.81■■■■■ 4.92
MANF-201ENST00000446668 ABCC9O60706 1549 aa45.17■■■■■ 4.82
MANF-201ENST00000446668 RB1CC1Q8TDY2 1594 aa43.37■■■■■ 4.53
MANF-201ENST00000446668 NACADO15069 1562 aa43.19■■■■■ 4.5
MANF-201ENST00000446668 DCAF8L2P0C7V8 631 aa42.97■■■■■ 4.47
MANF-201ENST00000446668 MYO15BQ96JP2 1530 aa42.77■■■■■ 4.44
MANF-201ENST00000446668 ZCCHC6Q5VYS8 1495 aaKnown RBP42.52■■■■■ 4.4
MANF-201ENST00000446668 DCAF1Q9Y4B6 1507 aa42.38■■■■■ 4.37
MANF-201ENST00000446668 UNC13AQ9UPW8 1703 aa42.23■■■■■ 4.35
MANF-201ENST00000446668 PABPN1Q86U42 306 aaKnown RBP eCLIP42.07■■■■■ 4.33
MANF-201ENST00000446668 BICRAQ9NZM4 1560 aa41.88■■■■■ 4.3
MANF-201ENST00000446668 DNAJC5BQ9UF47 199 aa41.72■■■■■ 4.27
MANF-201ENST00000446668 SHROOM4Q9ULL8 1493 aa41.67■■■■■ 4.26
MANF-201ENST00000446668 SCRIBQ14160 1630 aa41.66■■■■■ 4.26
MANF-201ENST00000446668 EIF4G1Q04637 1599 aaKnown RBP40.93■■■■■ 4.14
MANF-201ENST00000446668 CC2D2AQ9P2K1 1620 aa40.86■■■■■ 4.13
MANF-201ENST00000446668 CECR2Q9BXF3 1484 aa40.7■■■■■ 4.11
MANF-201ENST00000446668 SMARCA4P51532 1647 aa39.83■■■■□ 3.97
MANF-201ENST00000446668 NCAPD3P42695 1498 aa39.79■■■■□ 3.96
MANF-201ENST00000446668 BAZ1AQ9NRL2 1556 aaPredicted RBP39.77■■■■□ 3.96
MANF-201ENST00000446668 SMARCA2P51531 1590 aa39.76■■■■□ 3.95
MANF-201ENST00000446668 ATAD2BQ9ULI0 1458 aa39.71■■■■□ 3.95
MANF-201ENST00000446668 HMGXB3Q12766 1538 aa39.6■■■■□ 3.93
MANF-201ENST00000446668 PEG3Q9GZU2 1588 aa39.46■■■■□ 3.91
MANF-201ENST00000446668 BAZ1BQ9UIG0 1483 aaKnown RBP39.43■■■■□ 3.9
MANF-201ENST00000446668 MROH2BQ7Z745 1585 aa39.35■■■■□ 3.89
MANF-201ENST00000446668 ERCC6Q03468 1493 aa39.11■■■■□ 3.85
MANF-201ENST00000446668 WIZO95785 1651 aa38.92■■■■□ 3.82
MANF-201ENST00000446668 LAMC3Q9Y6N6 1575 aa38.9■■■■□ 3.82
MANF-201ENST00000446668 CUX2O14529 1486 aa38.88■■■■□ 3.81
MANF-201ENST00000446668 NESP48681 1621 aa38.88■■■■□ 3.81
MANF-201ENST00000446668 RSF1Q96T23 1441 aaPredicted RBP38.74■■■■□ 3.79
MANF-201ENST00000446668 PDS5BQ9NTI5 1447 aa38.67■■■■□ 3.78
MANF-201ENST00000446668 CADPSQ9ULU8 1353 aa38.61■■■■□ 3.77
MANF-201ENST00000446668 TOP2AP11388 1531 aaKnown RBP38.57■■■■□ 3.76
MANF-201ENST00000446668 KIF21AQ7Z4S6 1674 aa38.49■■■■□ 3.75
MANF-201ENST00000446668 THOC2Q8NI27 1593 aaKnown RBP38.48■■■■□ 3.75
MANF-201ENST00000446668 CFTRP13569 1480 aa38.27■■■■□ 3.72
MANF-201ENST00000446668 MRC2Q9UBG0 1479 aa38.25■■■■□ 3.71
MANF-201ENST00000446668 CEP164Q9UPV0 1460 aa38.23■■■■□ 3.71
MANF-201ENST00000446668 FANCD2Q9BXW9 1451 aa38.17■■■■□ 3.7
MANF-201ENST00000446668 DNAJC5Q9H3Z4 198 aa38.14■■■■□ 3.7
MANF-201ENST00000446668 WDR62O43379 1518 aa38.12■■■■□ 3.69
MANF-201ENST00000446668 CCDC88BA6NC98 1476 aa38.03■■■■□ 3.68
MANF-201ENST00000446668 PRDM2Q13029 1718 aa38.02■■■■□ 3.68
MANF-201ENST00000446668 URB2Q14146 1524 aaKnown RBP37.75■■■■□ 3.63
MANF-201ENST00000446668 ABCC8Q09428 1581 aa37.6■■■■□ 3.61
MANF-201ENST00000446668 TOPBP1Q92547 1522 aa37.48■■■■□ 3.59
MANF-201ENST00000446668 DNMBPQ6XZF7 1577 aa37.46■■■■□ 3.59
MANF-201ENST00000446668 IFT140Q96RY7 1462 aa37.45■■■■□ 3.59
MANF-201ENST00000446668 SUPT5HO00267 1087 aaKnown RBP37.41■■■■□ 3.58
MANF-201ENST00000446668 ZNF608Q9ULD9 1512 aaPredicted RBP37.17■■■■□ 3.54
MANF-201ENST00000446668 OSCARQ8IYS5 282 aa37.14■■■■□ 3.54
MANF-201ENST00000446668 POLA1P09884 1462 aaPredicted RBP37.13■■■■□ 3.53
MANF-201ENST00000446668 EIF4G3O43432 1585 aaKnown RBP37.1■■■■□ 3.53
MANF-201ENST00000446668 TARBP1Q13395 1621 aaKnown RBP37.09■■■■□ 3.53
MANF-201ENST00000446668 SOGA1O94964 1423 aa36.99■■■■□ 3.51
MANF-201ENST00000446668 CUX1P39880 1505 aa36.97■■■■□ 3.51
MANF-201ENST00000446668 FGD5Q6ZNL6 1462 aa36.97■■■■□ 3.51
MANF-201ENST00000446668 WDR97A6NE52 1622 aa36.96■■■■□ 3.51
MANF-201ENST00000446668 AQRO60306 1485 aaKnown RBP eCLIP36.93■■■■□ 3.52e-9■■■■■ 36.3
MANF-201ENST00000446668 RAD54L2Q9Y4B4 1467 aa36.91■■■■□ 3.5
MANF-201ENST00000446668 TDRD9Q8NDG6 1382 aaKnown RBP36.78■■■■□ 3.48
MANF-201ENST00000446668 CHD1O14646 1710 aa36.71■■■■□ 3.47
MANF-201ENST00000446668 TRIM41Q8WV44 630 aa36.7■■■■□ 3.47
MANF-201ENST00000446668 FBLN2P98095 1184 aa36.68■■■■□ 3.46
MANF-201ENST00000446668 GRIN2BQ13224 1484 aa36.66■■■■□ 3.46
MANF-201ENST00000446668 MAGI1Q96QZ7 1491 aaPredicted RBP36.64■■■■□ 3.46
MANF-201ENST00000446668 WRNQ14191 1432 aaPredicted RBP eCLIP36.64■■■■□ 3.46
MANF-201ENST00000446668 SNAPC4Q5SXM2 1469 aa36.63■■■■□ 3.45
MANF-201ENST00000446668 ABCA10Q8WWZ4 1543 aa36.62■■■■□ 3.45
MANF-201ENST00000446668 TOP2BQ02880 1626 aa36.59■■■■□ 3.45
MANF-201ENST00000446668 BIVM-ERCC5R4GMW8 1640 aa36.59■■■■□ 3.45
MANF-201ENST00000446668 GAPVD1Q14C86 1478 aa36.58■■■■□ 3.45
MANF-201ENST00000446668 RIMBP3CA6NJZ7 1639 aa36.54■■■■□ 3.44
MANF-201ENST00000446668 RIMBP3BA6NNM3 1639 aa36.54■■■■□ 3.44
MANF-201ENST00000446668 RIMBP3Q9UFD9 1639 aa36.54■■■■□ 3.44
MANF-201ENST00000446668 PBRM1Q86U86 1689 aa36.54■■■■□ 3.44
MANF-201ENST00000446668 CHMP7Q8WUX9 453 aaPredicted RBP36.53■■■■□ 3.44
MANF-201ENST00000446668 ABCA5Q8WWZ7 1642 aa36.5■■■■□ 3.43
MANF-201ENST00000446668 ARHGEF11O15085 1522 aa36.49■■■■□ 3.43
MANF-201ENST00000446668 SYNJ2O15056 1496 aa36.49■■■■□ 3.43
MANF-201ENST00000446668 SYNJ1O43426 1573 aa36.49■■■■□ 3.43
MANF-201ENST00000446668 CLASP1Q7Z460 1538 aa36.29■■■■□ 3.4
MANF-201ENST00000446668 ERICH3Q5RHP9 1530 aa36.22■■■■□ 3.39
MANF-201ENST00000446668 ADAMTS12P58397 1594 aa36.2■■■■□ 3.39
MANF-201ENST00000446668 CYB5RLQ6IPT4 315 aa36.17■■■■□ 3.38
MANF-201ENST00000446668 GRIN2AQ12879 1464 aa36.16■■■■□ 3.38
MANF-201ENST00000446668 FHAD1B1AJZ9 1412 aa36.16■■■■□ 3.38
MANF-201ENST00000446668 ARAP1Q96P48 1450 aa36.12■■■■□ 3.37
MANF-201ENST00000446668 NUP160Q12769 1436 aa36■■■■□ 3.35
MANF-201ENST00000446668 KIF27Q86VH2 1401 aa35.96■■■■□ 3.35
MANF-201ENST00000446668 CEP170Q5SW79 1584 aa35.94■■■■□ 3.34
MANF-201ENST00000446668 CUL7Q14999 1698 aa35.83■■■■□ 3.33
MANF-201ENST00000446668 SHROOM2Q13796 1616 aa35.79■■■■□ 3.32
MANF-201ENST00000446668 IGF1RP08069 1367 aa35.74■■■■□ 3.31
MANF-201ENST00000446668 TRHP20396 242 aaPredicted RBP35.68■■■■□ 3.3
MANF-201ENST00000446668 RUSC2Q8N2Y8 1516 aa35.67■■■■□ 3.3
MANF-201ENST00000446668 ERCC6L2Q5T890 1561 aa35.64■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms