RNA–Protein interactions for RNA: ENST00000446668.5

MANF-201, Transcript of mesencephalic astrocyte derived neurotrophic factor, humanhuman

TSL 3

Gene MANF, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MANF-201ENST00000446668 NCBP2P52298 156 aaKnown RBP eCLIP19.05■□□□□ 0.642e-34■□□□□ 10.1
MANF-201ENST00000446668 FTOQ9C0B1 505 aaKnown RBP eCLIP23.87■■□□□ 1.413e-29■■■■■ 72.1
MANF-201ENST00000446668 PRPF4O43172 522 aaKnown RBP eCLIP19.95■□□□□ 0.781e-19■■■■■ 60.7
MANF-201ENST00000446668 EIF3HO15372 352 aaKnown RBP eCLIP19.78■□□□□ 0.762e-19■■□□□ 13.9
MANF-201ENST00000446668 TIA1P31483 386 aaKnown RBP eCLIP19.14■□□□□ 0.656e-16■■■■■ 30
MANF-201ENST00000446668 PUM2Q8TB72 1066 aaKnown RBP eCLIP19■□□□□ 0.636e-13■■■■□ 25.6
MANF-201ENST00000446668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.6■■□□□ 1.691e-12■■■■■ 32.1
MANF-201ENST00000446668 DDX3XO00571 662 aaKnown RBP eCLIP21.12■□□□□ 0.972e-12■■■■■ 39
MANF-201ENST00000446668 TIAL1Q01085 375 aaKnown RBP eCLIP19.78■□□□□ 0.761e-11■■■■■ 53.9
MANF-201ENST00000446668 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.98■■□□□ 1.432e-11■□□□□ 10.5
MANF-201ENST00000446668 PTBP1P26599 531 aaKnown RBP eCLIP15.8■□□□□ 0.128e-11■■■■■ 41.9
MANF-201ENST00000446668 ZRANB2O95218 330 aaKnown RBP eCLIP20.72■□□□□ 0.912e-10■■■■□ 25.7
MANF-201ENST00000446668 SUB1P53999 127 aaKnown RBP eCLIP15.68■□□□□ 0.12e-10■■■■■ 30.2
MANF-201ENST00000446668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.86■■■□□ 2.692e-10■■■■□ 22.8
MANF-201ENST00000446668 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.13■□□□□ 0.973e-10■■□□□ 13.5
MANF-201ENST00000446668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.96■■■□□ 2.714e-10■■■□□ 15.8
MANF-201ENST00000446668 SRSF1Q07955 248 aaKnown RBP eCLIP19.6■□□□□ 0.736e-10■■■□□ 15.8
MANF-201ENST00000446668 SF3B1O75533 1304 aaKnown RBP eCLIP22.89■■□□□ 1.266e-10■■■■■ 187.2
MANF-201ENST00000446668 AQRO60306 1485 aaKnown RBP eCLIP36.93■■■■□ 3.52e-9■■■■■ 36.3
MANF-201ENST00000446668 GTF2F1P35269 517 aaKnown RBP eCLIP23.07■■□□□ 1.285e-9■■■□□ 18.1
MANF-201ENST00000446668 DDX6P26196 483 aaKnown RBP eCLIP22.33■■□□□ 1.171e-8■■■□□ 16.1
MANF-201ENST00000446668 RPS3P23396 243 aaKnown RBP eCLIP20.15■□□□□ 0.823e-8■■■■■ 39.5
MANF-201ENST00000446668 YBX3P16989 372 aaKnown RBP eCLIP27.6■■■□□ 2.014e-8■■□□□ 13
MANF-201ENST00000446668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.53■□□□□ 0.724e-8■□□□□ 9.6
MANF-201ENST00000446668 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.82■□□□□ 0.445e-8■■■■■ 27
MANF-201ENST00000446668 ZNF622Q969S3 477 aaKnown RBP eCLIP27.21■■□□□ 1.956e-8■□□□□ 9.1
MANF-201ENST00000446668 LARP4Q71RC2 724 aaKnown RBP eCLIP19.02■□□□□ 0.641e-7■■■■■ 28.3
MANF-201ENST00000446668 TRA2AQ13595 282 aaKnown RBP eCLIP20.62■□□□□ 0.892e-7■□□□□ 11.2
MANF-201ENST00000446668 FXR2P51116 673 aaKnown RBP eCLIP23.11■■□□□ 1.292e-7■□□□□ 8.9
MANF-201ENST00000446668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.39■■■□□ 2.142e-7■■■□□ 18
MANF-201ENST00000446668 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.59■□□□□ 0.732e-7■■■■■ 278.5
MANF-201ENST00000446668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.56■■□□□ 1.365e-7■■□□□ 14.1
MANF-201ENST00000446668 SF3A3Q12874 501 aaKnown RBP eCLIP18.09■□□□□ 0.497e-7■■■□□ 18.1
MANF-201ENST00000446668 PABPC4Q13310 644 aaKnown RBP eCLIP25.26■■□□□ 1.639e-7■■■■□ 21.1
MANF-201ENST00000446668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.77■■■■□ 31e-6■■■■□ 23.9
MANF-201ENST00000446668 SND1Q7KZF4 910 aaKnown RBP eCLIP21.56■■□□□ 1.041e-6■■■■■ 30.2
MANF-201ENST00000446668 G3BP1Q13283 466 aaKnown RBP eCLIP25.75■■□□□ 1.712e-6■■□□□ 11.6
MANF-201ENST00000446668 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.86■□□□□ 0.613e-6■■□□□ 12.3
MANF-201ENST00000446668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.02■■□□□ 1.126e-6■■■■■ 48.1
Retrieved 39 of 39 RNA–protein pairs in 14.2 ms