RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 NISCHQ9Y2I1 1504 aa32.27■■■□□ 2.76
HDAC11-214ENST00000446613 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.15
HDAC11-214ENST00000446613 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
HDAC11-214ENST00000446613 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
HDAC11-214ENST00000446613 HRCP23327 699 aa27.53■■■□□ 2
HDAC11-214ENST00000446613 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
HDAC11-214ENST00000446613 ZCCHC6Q5VYS8 1495 aaKnown RBP27.36■■□□□ 1.97
HDAC11-214ENST00000446613 PCGF6Q9BYE7 350 aa27.36■■□□□ 1.97
HDAC11-214ENST00000446613 PPARGC1BQ86YN6 1023 aaKnown RBP27.24■■□□□ 1.95
HDAC11-214ENST00000446613 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
HDAC11-214ENST00000446613 LOC105371045A0A1W2PR82 267 aa26.91■■□□□ 1.9
HDAC11-214ENST00000446613 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
HDAC11-214ENST00000446613 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
HDAC11-214ENST00000446613 TRIM26Q12899 539 aaPredicted RBP26.43■■□□□ 1.82
HDAC11-214ENST00000446613 EHMT2Q96KQ7 1210 aa26.12■■□□□ 1.77
HDAC11-214ENST00000446613 FAM9AQ8IZU1 332 aaPredicted RBP26.12■■□□□ 1.77
HDAC11-214ENST00000446613 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
HDAC11-214ENST00000446613 ABCC9O60706 1549 aa25.92■■□□□ 1.74
HDAC11-214ENST00000446613 ZEB1P37275 1124 aaPredicted RBP25.89■■□□□ 1.74
HDAC11-214ENST00000446613 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.73
HDAC11-214ENST00000446613 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
HDAC11-214ENST00000446613 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
HDAC11-214ENST00000446613 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
HDAC11-214ENST00000446613 PELP1Q8IZL8 1130 aaKnown RBP25.56■■□□□ 1.68
HDAC11-214ENST00000446613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.55■■□□□ 1.68
HDAC11-214ENST00000446613 CECR2Q9BXF3 1484 aa25.39■■□□□ 1.66
HDAC11-214ENST00000446613 CCER1Q8TC90 406 aaPredicted RBP25.38■■□□□ 1.65
HDAC11-214ENST00000446613 TTBK1Q5TCY1 1321 aaPredicted RBP25.37■■□□□ 1.65
HDAC11-214ENST00000446613 NEUROD1Q13562 356 aa25.37■■□□□ 1.65
HDAC11-214ENST00000446613 ACIN1Q9UKV3 1341 aaKnown RBP25.29■■□□□ 1.64
HDAC11-214ENST00000446613 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
HDAC11-214ENST00000446613 WIZO95785 1651 aa25.19■■□□□ 1.62
HDAC11-214ENST00000446613 DIEXFQ68CQ4 756 aaKnown RBP25.17■■□□□ 1.62
HDAC11-214ENST00000446613 GTF3C3Q9Y5Q9 886 aa25.15■■□□□ 1.62
HDAC11-214ENST00000446613 CENPBP07199 599 aaPredicted RBP24.95■■□□□ 1.58
HDAC11-214ENST00000446613 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
HDAC11-214ENST00000446613 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
HDAC11-214ENST00000446613 EIF4G1Q04637 1599 aaKnown RBP24.89■■□□□ 1.57
HDAC11-214ENST00000446613 YTHDC1Q96MU7 727 aaKnown RBP24.87■■□□□ 1.57
HDAC11-214ENST00000446613 CEP162Q5TB80 1403 aa24.86■■□□□ 1.57
HDAC11-214ENST00000446613 BAZ1AQ9NRL2 1556 aaPredicted RBP24.85■■□□□ 1.57
HDAC11-214ENST00000446613 SOGA1O94964 1423 aa24.82■■□□□ 1.56
HDAC11-214ENST00000446613 NACADO15069 1562 aa24.81■■□□□ 1.56
HDAC11-214ENST00000446613 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.565e-6■■■■■ 29.2
HDAC11-214ENST00000446613 ZNF316A6NFI3 1004 aaPredicted RBP24.74■■□□□ 1.55
HDAC11-214ENST00000446613 UBTFP17480 764 aaKnown RBP24.74■■□□□ 1.55
HDAC11-214ENST00000446613 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
HDAC11-214ENST00000446613 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.54
HDAC11-214ENST00000446613 TNIKQ9UKE5 1360 aa24.64■■□□□ 1.54
HDAC11-214ENST00000446613 MIER1Q8N108 512 aa24.64■■□□□ 1.53
HDAC11-214ENST00000446613 CSRNP3Q8WYN3 585 aa24.62■■□□□ 1.53
HDAC11-214ENST00000446613 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
HDAC11-214ENST00000446613 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
HDAC11-214ENST00000446613 SMARCA4P51532 1647 aa24.45■■□□□ 1.5
HDAC11-214ENST00000446613 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
HDAC11-214ENST00000446613 GOLGA3Q08378 1498 aa24.4■■□□□ 1.5
HDAC11-214ENST00000446613 EEA1Q15075 1411 aa24.35■■□□□ 1.49
HDAC11-214ENST00000446613 MYT1Q01538 1121 aa24.29■■□□□ 1.48
HDAC11-214ENST00000446613 CLIP1P30622 1438 aa24.26■■□□□ 1.47
HDAC11-214ENST00000446613 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
HDAC11-214ENST00000446613 APLP2Q06481 763 aa24.18■■□□□ 1.46
HDAC11-214ENST00000446613 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
HDAC11-214ENST00000446613 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
HDAC11-214ENST00000446613 UNC13AQ9UPW8 1703 aa24.16■■□□□ 1.46
HDAC11-214ENST00000446613 VPS8Q8N3P4 1428 aa24.15■■□□□ 1.46
HDAC11-214ENST00000446613 RAPGEF2Q9Y4G8 1499 aa24.12■■□□□ 1.45
HDAC11-214ENST00000446613 KIF21BO75037 1637 aa24.07■■□□□ 1.44
HDAC11-214ENST00000446613 SUPT16HQ9Y5B9 1047 aaKnown RBP24.02■■□□□ 1.44
HDAC11-214ENST00000446613 DHX57Q6P158 1386 aaKnown RBP24■■□□□ 1.43
HDAC11-214ENST00000446613 KANK4Q5T7N3 995 aaPredicted RBP23.97■■□□□ 1.43
HDAC11-214ENST00000446613 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.42
HDAC11-214ENST00000446613 KCNH8Q96L42 1107 aa23.89■■□□□ 1.41
HDAC11-214ENST00000446613 ITGAEP38570 1179 aa23.86■■□□□ 1.41
HDAC11-214ENST00000446613 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
HDAC11-214ENST00000446613 TSHZ2Q9NRE2 1034 aa23.79■■□□□ 1.4
HDAC11-214ENST00000446613 CLSPNQ9HAW4 1339 aa23.78■■□□□ 1.4
HDAC11-214ENST00000446613 ARAP1Q96P48 1450 aa23.78■■□□□ 1.4
HDAC11-214ENST00000446613 PEG3Q9GZU2 1588 aa23.77■■□□□ 1.4
HDAC11-214ENST00000446613 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
HDAC11-214ENST00000446613 BCANQ96GW7 911 aa23.74■■□□□ 1.39
HDAC11-214ENST00000446613 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
HDAC11-214ENST00000446613 PRXQ9BXM0 1461 aa23.64■■□□□ 1.37
HDAC11-214ENST00000446613 RRBP1Q9P2E9 1410 aaKnown RBP23.63■■□□□ 1.37
HDAC11-214ENST00000446613 CCNB3Q8WWL7 1395 aa23.6■■□□□ 1.37
HDAC11-214ENST00000446613 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
HDAC11-214ENST00000446613 ERICH3Q5RHP9 1530 aa23.55■■□□□ 1.36
HDAC11-214ENST00000446613 RAB3GAP2Q9H2M9 1393 aa23.55■■□□□ 1.36
HDAC11-214ENST00000446613 HIRIP3Q9BW71 556 aaPredicted RBP23.54■■□□□ 1.36
HDAC11-214ENST00000446613 FKBP8Q14318 412 aa23.53■■□□□ 1.36
HDAC11-214ENST00000446613 SIN3AQ96ST3 1273 aa23.53■■□□□ 1.36
HDAC11-214ENST00000446613 ANP32EQ9BTT0 268 aa23.52■■□□□ 1.36
HDAC11-214ENST00000446613 BIVM-ERCC5R4GMW8 1640 aa23.5■■□□□ 1.35
HDAC11-214ENST00000446613 MAPKBP1O60336 1514 aa23.49■■□□□ 1.35
HDAC11-214ENST00000446613 CUX2O14529 1486 aa23.49■■□□□ 1.35
HDAC11-214ENST00000446613 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
HDAC11-214ENST00000446613 CUX1P39880 1505 aa23.44■■□□□ 1.34
HDAC11-214ENST00000446613 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
HDAC11-214ENST00000446613 TRIM52Q96A61 297 aa23.42■■□□□ 1.34
HDAC11-214ENST00000446613 KIF27Q86VH2 1401 aa23.41■■□□□ 1.34
HDAC11-214ENST00000446613 FAM50AQ14320 339 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms