RNA–Protein interactions for RNA: ENST00000445237.2

HDAC7-214, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 364 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-214ENST00000445237 NISCHQ9Y2I1 1504 aa44.29■■■■■ 4.68
HDAC7-214ENST00000445237 CCDC180Q9P1Z9 1646 aa39.56■■■■□ 3.92
HDAC7-214ENST00000445237 ABCC9O60706 1549 aa39.49■■■■□ 3.91
HDAC7-214ENST00000445237 RB1CC1Q8TDY2 1594 aa37.59■■■■□ 3.61
HDAC7-214ENST00000445237 DCAF8L2P0C7V8 631 aa37.4■■■■□ 3.58
HDAC7-214ENST00000445237 NACADO15069 1562 aa37.38■■■■□ 3.57
HDAC7-214ENST00000445237 MYO15BQ96JP2 1530 aa36.9■■■■□ 3.5
HDAC7-214ENST00000445237 DNAJC5BQ9UF47 199 aa36.87■■■■□ 3.49
HDAC7-214ENST00000445237 PABPN1Q86U42 306 aaKnown RBP eCLIP36.84■■■■□ 3.49
HDAC7-214ENST00000445237 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
HDAC7-214ENST00000445237 UNC13AQ9UPW8 1703 aa36.72■■■■□ 3.47
HDAC7-214ENST00000445237 DCAF1Q9Y4B6 1507 aa36.54■■■■□ 3.44
HDAC7-214ENST00000445237 BICRAQ9NZM4 1560 aa36.53■■■■□ 3.44
HDAC7-214ENST00000445237 SCRIBQ14160 1630 aa36.17■■■■□ 3.38
HDAC7-214ENST00000445237 SHROOM4Q9ULL8 1493 aa35.96■■■■□ 3.35
HDAC7-214ENST00000445237 CC2D2AQ9P2K1 1620 aa35.62■■■■□ 3.29
HDAC7-214ENST00000445237 EIF4G1Q04637 1599 aaKnown RBP35.59■■■■□ 3.29
HDAC7-214ENST00000445237 CECR2Q9BXF3 1484 aa35.5■■■■□ 3.27
HDAC7-214ENST00000445237 NCAPD3P42695 1498 aa34.53■■■■□ 3.12
HDAC7-214ENST00000445237 ATAD2BQ9ULI0 1458 aa34.49■■■■□ 3.11
HDAC7-214ENST00000445237 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
HDAC7-214ENST00000445237 SMARCA2P51531 1590 aa34.36■■■■□ 3.09
HDAC7-214ENST00000445237 BAZ1AQ9NRL2 1556 aaPredicted RBP34.34■■■■□ 3.09
HDAC7-214ENST00000445237 HMGXB3Q12766 1538 aa34.27■■■■□ 3.08
HDAC7-214ENST00000445237 MROH2BQ7Z745 1585 aa34.17■■■■□ 3.06
HDAC7-214ENST00000445237 BAZ1BQ9UIG0 1483 aaKnown RBP34.16■■■■□ 3.06
HDAC7-214ENST00000445237 PEG3Q9GZU2 1588 aa34.11■■■■□ 3.05
HDAC7-214ENST00000445237 ERCC6Q03468 1493 aa34.04■■■■□ 3.04
HDAC7-214ENST00000445237 NESP48681 1621 aa33.99■■■■□ 3.03
HDAC7-214ENST00000445237 CUX2O14529 1486 aa33.84■■■■□ 3.01
HDAC7-214ENST00000445237 WIZO95785 1651 aa33.75■■■□□ 2.99
HDAC7-214ENST00000445237 LAMC3Q9Y6N6 1575 aa33.69■■■□□ 2.98
HDAC7-214ENST00000445237 DNAJC5Q9H3Z4 198 aa33.62■■■□□ 2.97
HDAC7-214ENST00000445237 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
HDAC7-214ENST00000445237 THOC2Q8NI27 1593 aaKnown RBP33.52■■■□□ 2.96
HDAC7-214ENST00000445237 PDS5BQ9NTI5 1447 aa33.52■■■□□ 2.96
HDAC7-214ENST00000445237 CADPSQ9ULU8 1353 aa33.51■■■□□ 2.96
HDAC7-214ENST00000445237 KIF21AQ7Z4S6 1674 aa33.48■■■□□ 2.95
HDAC7-214ENST00000445237 TOP2AP11388 1531 aaKnown RBP33.32■■■□□ 2.92
HDAC7-214ENST00000445237 MRC2Q9UBG0 1479 aa33.23■■■□□ 2.91
HDAC7-214ENST00000445237 CFTRP13569 1480 aa33.17■■■□□ 2.9
HDAC7-214ENST00000445237 FANCD2Q9BXW9 1451 aa33.15■■■□□ 2.9
HDAC7-214ENST00000445237 CEP164Q9UPV0 1460 aa33.14■■■□□ 2.9
HDAC7-214ENST00000445237 WDR62O43379 1518 aa33.11■■■□□ 2.89
HDAC7-214ENST00000445237 CCDC88BA6NC98 1476 aa32.98■■■□□ 2.87
HDAC7-214ENST00000445237 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
HDAC7-214ENST00000445237 PRDM2Q13029 1718 aa32.77■■■□□ 2.84
HDAC7-214ENST00000445237 TOPBP1Q92547 1522 aa32.54■■■□□ 2.8
HDAC7-214ENST00000445237 IFT140Q96RY7 1462 aa32.47■■■□□ 2.79
HDAC7-214ENST00000445237 ZNF608Q9ULD9 1512 aaPredicted RBP32.45■■■□□ 2.78
HDAC7-214ENST00000445237 ABCC8Q09428 1581 aa32.43■■■□□ 2.78
HDAC7-214ENST00000445237 DNMBPQ6XZF7 1577 aa32.41■■■□□ 2.78
HDAC7-214ENST00000445237 OSCARQ8IYS5 282 aa32.39■■■□□ 2.78
HDAC7-214ENST00000445237 SUPT5HO00267 1087 aaKnown RBP32.32■■■□□ 2.76
HDAC7-214ENST00000445237 TRIM41Q8WV44 630 aa32.31■■■□□ 2.76
HDAC7-214ENST00000445237 EIF4G3O43432 1585 aaKnown RBP32.23■■■□□ 2.75
HDAC7-214ENST00000445237 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
HDAC7-214ENST00000445237 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
HDAC7-214ENST00000445237 AQRO60306 1485 aaKnown RBP eCLIP32.18■■■□□ 2.747e-11■■□□□ 13
HDAC7-214ENST00000445237 RAD54L2Q9Y4B4 1467 aa32.15■■■□□ 2.74
HDAC7-214ENST00000445237 SOGA1O94964 1423 aa32.1■■■□□ 2.73
HDAC7-214ENST00000445237 CUX1P39880 1505 aa32.08■■■□□ 2.73
HDAC7-214ENST00000445237 FGD5Q6ZNL6 1462 aa32.07■■■□□ 2.72
HDAC7-214ENST00000445237 TDRD9Q8NDG6 1382 aaKnown RBP32.05■■■□□ 2.72
HDAC7-214ENST00000445237 FBLN2P98095 1184 aa31.96■■■□□ 2.71
HDAC7-214ENST00000445237 CHD1O14646 1710 aa31.93■■■□□ 2.7
HDAC7-214ENST00000445237 RIMBP3CA6NJZ7 1639 aa31.93■■■□□ 2.7
HDAC7-214ENST00000445237 RIMBP3BA6NNM3 1639 aa31.93■■■□□ 2.7
HDAC7-214ENST00000445237 RIMBP3Q9UFD9 1639 aa31.93■■■□□ 2.7
HDAC7-214ENST00000445237 ARHGEF11O15085 1522 aa31.85■■■□□ 2.69
HDAC7-214ENST00000445237 SNAPC4Q5SXM2 1469 aa31.84■■■□□ 2.69
HDAC7-214ENST00000445237 WDR97A6NE52 1622 aa31.82■■■□□ 2.69
HDAC7-214ENST00000445237 GRIN2BQ13224 1484 aa31.77■■■□□ 2.68
HDAC7-214ENST00000445237 MAGI1Q96QZ7 1491 aaPredicted RBP31.72■■■□□ 2.67
HDAC7-214ENST00000445237 CHMP7Q8WUX9 453 aaPredicted RBP31.72■■■□□ 2.67
HDAC7-214ENST00000445237 GAPVD1Q14C86 1478 aa31.7■■■□□ 2.66
HDAC7-214ENST00000445237 ABCA10Q8WWZ4 1543 aa31.68■■■□□ 2.66
HDAC7-214ENST00000445237 CYB5RLQ6IPT4 315 aa31.67■■■□□ 2.66
HDAC7-214ENST00000445237 WRNQ14191 1432 aaPredicted RBP eCLIP31.63■■■□□ 2.655e-6■■■■■ 29.2
HDAC7-214ENST00000445237 SYNJ2O15056 1496 aa31.63■■■□□ 2.65
HDAC7-214ENST00000445237 PBRM1Q86U86 1689 aa31.62■■■□□ 2.65
HDAC7-214ENST00000445237 ABCA5Q8WWZ7 1642 aa31.61■■■□□ 2.65
HDAC7-214ENST00000445237 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
HDAC7-214ENST00000445237 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
HDAC7-214ENST00000445237 CLASP1Q7Z460 1538 aa31.58■■■□□ 2.65
HDAC7-214ENST00000445237 ARAP1Q96P48 1450 aa31.58■■■□□ 2.65
HDAC7-214ENST00000445237 BIVM-ERCC5R4GMW8 1640 aa31.57■■■□□ 2.64
HDAC7-214ENST00000445237 ADAMTS12P58397 1594 aa31.36■■■□□ 2.61
HDAC7-214ENST00000445237 GRIN2AQ12879 1464 aa31.36■■■□□ 2.61
HDAC7-214ENST00000445237 FHAD1B1AJZ9 1412 aa31.3■■■□□ 2.6
HDAC7-214ENST00000445237 ERICH3Q5RHP9 1530 aa31.28■■■□□ 2.6
HDAC7-214ENST00000445237 CEP170Q5SW79 1584 aa31.25■■■□□ 2.59
HDAC7-214ENST00000445237 TRHP20396 242 aaPredicted RBP31.24■■■□□ 2.59
HDAC7-214ENST00000445237 NUP160Q12769 1436 aa31.24■■■□□ 2.59
HDAC7-214ENST00000445237 ERCC6L2Q5T890 1561 aa31.17■■■□□ 2.58
HDAC7-214ENST00000445237 SHROOM2Q13796 1616 aa31.04■■■□□ 2.56
HDAC7-214ENST00000445237 KIF27Q86VH2 1401 aa31■■■□□ 2.55
HDAC7-214ENST00000445237 IGF1RP08069 1367 aa31■■■□□ 2.55
HDAC7-214ENST00000445237 JPH4Q96JJ6 628 aa30.96■■■□□ 2.55
HDAC7-214ENST00000445237 PRG4Q92954 1404 aaPredicted RBP30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms