RNA–Protein interactions for RNA: ENST00000444491.5

ITSN1-219, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 827 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-219ENST00000444491 NISCHQ9Y2I1 1504 aa45.43■■■■■ 4.86
ITSN1-219ENST00000444491 CCDC180Q9P1Z9 1646 aa40.55■■■■■ 4.08
ITSN1-219ENST00000444491 ABCC9O60706 1549 aa39.95■■■■□ 3.99
ITSN1-219ENST00000444491 RB1CC1Q8TDY2 1594 aa38.33■■■■□ 3.73
ITSN1-219ENST00000444491 NACADO15069 1562 aa38.21■■■■□ 3.71
ITSN1-219ENST00000444491 DCAF8L2P0C7V8 631 aa38.14■■■■□ 3.7
ITSN1-219ENST00000444491 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
ITSN1-219ENST00000444491 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
ITSN1-219ENST00000444491 DCAF1Q9Y4B6 1507 aa37.59■■■■□ 3.61
ITSN1-219ENST00000444491 UNC13AQ9UPW8 1703 aa37.41■■■■□ 3.58
ITSN1-219ENST00000444491 PABPN1Q86U42 306 aaKnown RBP eCLIP37.28■■■■□ 3.56
ITSN1-219ENST00000444491 BICRAQ9NZM4 1560 aa37.11■■■■□ 3.53
ITSN1-219ENST00000444491 SCRIBQ14160 1630 aa36.95■■■■□ 3.51
ITSN1-219ENST00000444491 DNAJC5BQ9UF47 199 aa36.9■■■■□ 3.5
ITSN1-219ENST00000444491 SHROOM4Q9ULL8 1493 aa36.77■■■■□ 3.48
ITSN1-219ENST00000444491 EIF4G1Q04637 1599 aaKnown RBP36.19■■■■□ 3.38
ITSN1-219ENST00000444491 CC2D2AQ9P2K1 1620 aa36.12■■■■□ 3.37
ITSN1-219ENST00000444491 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
ITSN1-219ENST00000444491 SMARCA4P51532 1647 aa35.32■■■■□ 3.24
ITSN1-219ENST00000444491 BAZ1AQ9NRL2 1556 aaPredicted RBP35.26■■■■□ 3.24
ITSN1-219ENST00000444491 NCAPD3P42695 1498 aa35.24■■■■□ 3.23
ITSN1-219ENST00000444491 ATAD2BQ9ULI0 1458 aa35.21■■■■□ 3.23
ITSN1-219ENST00000444491 SMARCA2P51531 1590 aa35.18■■■■□ 3.22
ITSN1-219ENST00000444491 HMGXB3Q12766 1538 aa35.04■■■■□ 3.2
ITSN1-219ENST00000444491 MROH2BQ7Z745 1585 aa34.99■■■■□ 3.19
ITSN1-219ENST00000444491 PEG3Q9GZU2 1588 aa34.97■■■■□ 3.19
ITSN1-219ENST00000444491 BAZ1BQ9UIG0 1483 aaKnown RBP34.92■■■■□ 3.18
ITSN1-219ENST00000444491 WIZO95785 1651 aa34.6■■■■□ 3.13
ITSN1-219ENST00000444491 ERCC6Q03468 1493 aa34.5■■■■□ 3.11
ITSN1-219ENST00000444491 RSF1Q96T23 1441 aaPredicted RBP34.49■■■■□ 3.11
ITSN1-219ENST00000444491 NESP48681 1621 aa34.45■■■■□ 3.11
ITSN1-219ENST00000444491 LAMC3Q9Y6N6 1575 aa34.37■■■■□ 3.09
ITSN1-219ENST00000444491 TOP2AP11388 1531 aaKnown RBP34.24■■■■□ 3.07
ITSN1-219ENST00000444491 CUX2O14529 1486 aa34.23■■■■□ 3.07
ITSN1-219ENST00000444491 CADPSQ9ULU8 1353 aa34.21■■■■□ 3.07
ITSN1-219ENST00000444491 PDS5BQ9NTI5 1447 aa34.18■■■■□ 3.06
ITSN1-219ENST00000444491 KIF21AQ7Z4S6 1674 aa34.06■■■■□ 3.04
ITSN1-219ENST00000444491 THOC2Q8NI27 1593 aaKnown RBP34■■■■□ 3.03
ITSN1-219ENST00000444491 CFTRP13569 1480 aa33.93■■■■□ 3.02
ITSN1-219ENST00000444491 CCDC88BA6NC98 1476 aa33.82■■■■□ 3.01
ITSN1-219ENST00000444491 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3
ITSN1-219ENST00000444491 MRC2Q9UBG0 1479 aa33.82■■■■□ 3
ITSN1-219ENST00000444491 CEP164Q9UPV0 1460 aa33.82■■■■□ 3
ITSN1-219ENST00000444491 WDR62O43379 1518 aa33.69■■■□□ 2.98
ITSN1-219ENST00000444491 PRDM2Q13029 1718 aa33.67■■■□□ 2.98
ITSN1-219ENST00000444491 DNAJC5Q9H3Z4 198 aa33.54■■■□□ 2.96
ITSN1-219ENST00000444491 URB2Q14146 1524 aaKnown RBP33.47■■■□□ 2.95
ITSN1-219ENST00000444491 SUPT5HO00267 1087 aaKnown RBP33.44■■■□□ 2.94
ITSN1-219ENST00000444491 ABCC8Q09428 1581 aa33.27■■■□□ 2.92
ITSN1-219ENST00000444491 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
ITSN1-219ENST00000444491 DNMBPQ6XZF7 1577 aa33.17■■■□□ 2.9
ITSN1-219ENST00000444491 IFT140Q96RY7 1462 aa33.12■■■□□ 2.89
ITSN1-219ENST00000444491 ZNF608Q9ULD9 1512 aaPredicted RBP32.95■■■□□ 2.87
ITSN1-219ENST00000444491 POLA1P09884 1462 aaPredicted RBP32.92■■■□□ 2.86
ITSN1-219ENST00000444491 TARBP1Q13395 1621 aaKnown RBP32.87■■■□□ 2.85
ITSN1-219ENST00000444491 CUX1P39880 1505 aa32.85■■■□□ 2.85
ITSN1-219ENST00000444491 EIF4G3O43432 1585 aaKnown RBP32.82■■■□□ 2.84
ITSN1-219ENST00000444491 SOGA1O94964 1423 aa32.81■■■□□ 2.84
ITSN1-219ENST00000444491 FGD5Q6ZNL6 1462 aa32.8■■■□□ 2.84
ITSN1-219ENST00000444491 OSCARQ8IYS5 282 aa32.79■■■□□ 2.84
ITSN1-219ENST00000444491 RAD54L2Q9Y4B4 1467 aa32.78■■■□□ 2.84
ITSN1-219ENST00000444491 AQRO60306 1485 aaKnown RBP eCLIP32.74■■■□□ 2.83
ITSN1-219ENST00000444491 TDRD9Q8NDG6 1382 aaKnown RBP32.65■■■□□ 2.82
ITSN1-219ENST00000444491 WDR97A6NE52 1622 aa32.65■■■□□ 2.82
ITSN1-219ENST00000444491 WRNQ14191 1432 aaPredicted RBP eCLIP32.56■■■□□ 2.8
ITSN1-219ENST00000444491 TOP2BQ02880 1626 aa32.51■■■□□ 2.79
ITSN1-219ENST00000444491 BIVM-ERCC5R4GMW8 1640 aa32.5■■■□□ 2.79
ITSN1-219ENST00000444491 ABCA10Q8WWZ4 1543 aa32.48■■■□□ 2.79
ITSN1-219ENST00000444491 CHD1O14646 1710 aa32.48■■■□□ 2.79
ITSN1-219ENST00000444491 FBLN2P98095 1184 aa32.47■■■□□ 2.79
ITSN1-219ENST00000444491 GRIN2BQ13224 1484 aa32.47■■■□□ 2.79
ITSN1-219ENST00000444491 SYNJ1O43426 1573 aa32.45■■■□□ 2.79
ITSN1-219ENST00000444491 SNAPC4Q5SXM2 1469 aa32.44■■■□□ 2.78
ITSN1-219ENST00000444491 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
ITSN1-219ENST00000444491 MAGI1Q96QZ7 1491 aaPredicted RBP32.42■■■□□ 2.78
ITSN1-219ENST00000444491 PBRM1Q86U86 1689 aa32.36■■■□□ 2.77
ITSN1-219ENST00000444491 ABCA5Q8WWZ7 1642 aa32.36■■■□□ 2.77
ITSN1-219ENST00000444491 CHMP7Q8WUX9 453 aaPredicted RBP32.33■■■□□ 2.77
ITSN1-219ENST00000444491 TRIM41Q8WV44 630 aa32.32■■■□□ 2.76
ITSN1-219ENST00000444491 SYNJ2O15056 1496 aa32.29■■■□□ 2.76
ITSN1-219ENST00000444491 RIMBP3CA6NJZ7 1639 aa32.24■■■□□ 2.75
ITSN1-219ENST00000444491 RIMBP3BA6NNM3 1639 aa32.24■■■□□ 2.75
ITSN1-219ENST00000444491 RIMBP3Q9UFD9 1639 aa32.24■■■□□ 2.75
ITSN1-219ENST00000444491 ARHGEF11O15085 1522 aa32.21■■■□□ 2.75
ITSN1-219ENST00000444491 CLASP1Q7Z460 1538 aa32.1■■■□□ 2.73
ITSN1-219ENST00000444491 ERICH3Q5RHP9 1530 aa32.1■■■□□ 2.73
ITSN1-219ENST00000444491 ADAMTS12P58397 1594 aa32.08■■■□□ 2.73
ITSN1-219ENST00000444491 FHAD1B1AJZ9 1412 aa32.04■■■□□ 2.72
ITSN1-219ENST00000444491 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
ITSN1-219ENST00000444491 CYB5RLQ6IPT4 315 aa31.96■■■□□ 2.71
ITSN1-219ENST00000444491 KIF27Q86VH2 1401 aa31.93■■■□□ 2.7
ITSN1-219ENST00000444491 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
ITSN1-219ENST00000444491 NUP160Q12769 1436 aa31.9■■■□□ 2.7
ITSN1-219ENST00000444491 CEP170Q5SW79 1584 aa31.85■■■□□ 2.69
ITSN1-219ENST00000444491 IGF1RP08069 1367 aa31.8■■■□□ 2.68
ITSN1-219ENST00000444491 CUL7Q14999 1698 aa31.76■■■□□ 2.67
ITSN1-219ENST00000444491 SHROOM2Q13796 1616 aa31.68■■■□□ 2.66
ITSN1-219ENST00000444491 CARMIL1Q5VZK9 1371 aa31.63■■■□□ 2.65
ITSN1-219ENST00000444491 ERCC6L2Q5T890 1561 aa31.6■■■□□ 2.65
ITSN1-219ENST00000444491 RUSC2Q8N2Y8 1516 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms