RNA–Protein interactions for RNA: ENST00000444465.1

LINC00473-201, long intergenic non-protein coding RNA 473, humanhuman

TSL 3 BASIC

Gene LINC00473, Length 798 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-201ENST00000444465 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
LINC00473-201ENST00000444465 CCDC180Q9P1Z9 1646 aa35.56■■■■□ 3.28
LINC00473-201ENST00000444465 ABCC9O60706 1549 aa35.47■■■■□ 3.27
LINC00473-201ENST00000444465 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
LINC00473-201ENST00000444465 NACADO15069 1562 aa33.67■■■□□ 2.98
LINC00473-201ENST00000444465 DNAJC5BQ9UF47 199 aa33.48■■■□□ 2.95
LINC00473-201ENST00000444465 MYO15BQ96JP2 1530 aa33.33■■■□□ 2.93
LINC00473-201ENST00000444465 DCAF8L2P0C7V8 631 aa33.13■■■□□ 2.89
LINC00473-201ENST00000444465 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
LINC00473-201ENST00000444465 PABPN1Q86U42 306 aaKnown RBP eCLIP32.98■■■□□ 2.87
LINC00473-201ENST00000444465 BICRAQ9NZM4 1560 aa32.9■■■□□ 2.86
LINC00473-201ENST00000444465 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
LINC00473-201ENST00000444465 ZCCHC6Q5VYS8 1495 aaKnown RBP32.76■■■□□ 2.84
LINC00473-201ENST00000444465 SHROOM4Q9ULL8 1493 aa32.61■■■□□ 2.81
LINC00473-201ENST00000444465 SCRIBQ14160 1630 aa32.18■■■□□ 2.74
LINC00473-201ENST00000444465 CC2D2AQ9P2K1 1620 aa32.12■■■□□ 2.73
LINC00473-201ENST00000444465 EIF4G1Q04637 1599 aaKnown RBP32.07■■■□□ 2.72
LINC00473-201ENST00000444465 CECR2Q9BXF3 1484 aa32.04■■■□□ 2.72
LINC00473-201ENST00000444465 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
LINC00473-201ENST00000444465 ATAD2BQ9ULI0 1458 aa30.93■■■□□ 2.54
LINC00473-201ENST00000444465 DNAJC5Q9H3Z4 198 aa30.9■■■□□ 2.54
LINC00473-201ENST00000444465 SMARCA2P51531 1590 aa30.84■■■□□ 2.53
LINC00473-201ENST00000444465 HMGXB3Q12766 1538 aa30.84■■■□□ 2.53
LINC00473-201ENST00000444465 SMARCA4P51532 1647 aa30.83■■■□□ 2.53
LINC00473-201ENST00000444465 CUX2O14529 1486 aa30.8■■■□□ 2.52
LINC00473-201ENST00000444465 BAZ1AQ9NRL2 1556 aaPredicted RBP30.7■■■□□ 2.5
LINC00473-201ENST00000444465 PEG3Q9GZU2 1588 aa30.68■■■□□ 2.5
LINC00473-201ENST00000444465 ERCC6Q03468 1493 aa30.63■■■□□ 2.49
LINC00473-201ENST00000444465 BAZ1BQ9UIG0 1483 aaKnown RBP30.55■■■□□ 2.48
LINC00473-201ENST00000444465 NESP48681 1621 aa30.47■■■□□ 2.47
LINC00473-201ENST00000444465 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
LINC00473-201ENST00000444465 LAMC3Q9Y6N6 1575 aa30.37■■■□□ 2.45
LINC00473-201ENST00000444465 THOC2Q8NI27 1593 aaKnown RBP30.26■■■□□ 2.43
LINC00473-201ENST00000444465 PDS5BQ9NTI5 1447 aa30.19■■■□□ 2.42
LINC00473-201ENST00000444465 CADPSQ9ULU8 1353 aa30.11■■■□□ 2.41
LINC00473-201ENST00000444465 KIF21AQ7Z4S6 1674 aa30.06■■■□□ 2.4
LINC00473-201ENST00000444465 WIZO95785 1651 aa29.98■■■□□ 2.39
LINC00473-201ENST00000444465 MRC2Q9UBG0 1479 aa29.89■■■□□ 2.38
LINC00473-201ENST00000444465 WDR62O43379 1518 aa29.86■■■□□ 2.37
LINC00473-201ENST00000444465 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
LINC00473-201ENST00000444465 CFTRP13569 1480 aa29.77■■■□□ 2.36
LINC00473-201ENST00000444465 CEP164Q9UPV0 1460 aa29.72■■■□□ 2.35
LINC00473-201ENST00000444465 FANCD2Q9BXW9 1451 aa29.69■■■□□ 2.34
LINC00473-201ENST00000444465 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
LINC00473-201ENST00000444465 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
LINC00473-201ENST00000444465 PRDM2Q13029 1718 aa29.37■■■□□ 2.29
LINC00473-201ENST00000444465 CCDC88BA6NC98 1476 aa29.33■■■□□ 2.29
LINC00473-201ENST00000444465 OSCARQ8IYS5 282 aa29.32■■■□□ 2.28
LINC00473-201ENST00000444465 TRIM41Q8WV44 630 aa29.21■■■□□ 2.27
LINC00473-201ENST00000444465 IFT140Q96RY7 1462 aa29.19■■■□□ 2.26
LINC00473-201ENST00000444465 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
LINC00473-201ENST00000444465 TOPBP1Q92547 1522 aa29.14■■■□□ 2.25
LINC00473-201ENST00000444465 ZNF608Q9ULD9 1512 aaPredicted RBP29.08■■■□□ 2.25
LINC00473-201ENST00000444465 DNMBPQ6XZF7 1577 aa29.02■■■□□ 2.24
LINC00473-201ENST00000444465 TARBP1Q13395 1621 aaKnown RBP28.91■■■□□ 2.22
LINC00473-201ENST00000444465 EIF4G3O43432 1585 aaKnown RBP28.9■■■□□ 2.22
LINC00473-201ENST00000444465 RIMBP3CA6NJZ7 1639 aa28.87■■■□□ 2.21
LINC00473-201ENST00000444465 RIMBP3BA6NNM3 1639 aa28.87■■■□□ 2.21
LINC00473-201ENST00000444465 RIMBP3Q9UFD9 1639 aa28.87■■■□□ 2.21
LINC00473-201ENST00000444465 POLA1P09884 1462 aaPredicted RBP28.84■■■□□ 2.21
LINC00473-201ENST00000444465 ARHGEF11O15085 1522 aa28.82■■■□□ 2.2
LINC00473-201ENST00000444465 AQRO60306 1485 aaKnown RBP eCLIP28.79■■■□□ 2.2
LINC00473-201ENST00000444465 WDR97A6NE52 1622 aa28.71■■■□□ 2.19
LINC00473-201ENST00000444465 SOGA1O94964 1423 aa28.69■■■□□ 2.18
LINC00473-201ENST00000444465 CHD1O14646 1710 aa28.67■■■□□ 2.18
LINC00473-201ENST00000444465 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
LINC00473-201ENST00000444465 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
LINC00473-201ENST00000444465 TDRD9Q8NDG6 1382 aaKnown RBP28.59■■■□□ 2.17
LINC00473-201ENST00000444465 CUX1P39880 1505 aa28.58■■■□□ 2.17
LINC00473-201ENST00000444465 CYB5RLQ6IPT4 315 aa28.53■■■□□ 2.16
LINC00473-201ENST00000444465 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
LINC00473-201ENST00000444465 MAGI1Q96QZ7 1491 aaPredicted RBP28.52■■■□□ 2.16
LINC00473-201ENST00000444465 FBLN2P98095 1184 aa28.5■■■□□ 2.15
LINC00473-201ENST00000444465 SNAPC4Q5SXM2 1469 aa28.48■■■□□ 2.15
LINC00473-201ENST00000444465 GRIN2BQ13224 1484 aa28.47■■■□□ 2.15
LINC00473-201ENST00000444465 CLASP1Q7Z460 1538 aa28.47■■■□□ 2.15
LINC00473-201ENST00000444465 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
LINC00473-201ENST00000444465 CHMP7Q8WUX9 453 aaPredicted RBP28.39■■■□□ 2.14
LINC00473-201ENST00000444465 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
LINC00473-201ENST00000444465 ABCA10Q8WWZ4 1543 aa28.36■■■□□ 2.13
LINC00473-201ENST00000444465 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
LINC00473-201ENST00000444465 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
LINC00473-201ENST00000444465 PBRM1Q86U86 1689 aa28.26■■■□□ 2.12
LINC00473-201ENST00000444465 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
LINC00473-201ENST00000444465 TRHP20396 242 aaPredicted RBP28.16■■■□□ 2.1
LINC00473-201ENST00000444465 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.1
LINC00473-201ENST00000444465 TOP2BQ02880 1626 aa28.12■■■□□ 2.09
LINC00473-201ENST00000444465 BIVM-ERCC5R4GMW8 1640 aa28.12■■■□□ 2.09
LINC00473-201ENST00000444465 GRIN2AQ12879 1464 aa28.09■■■□□ 2.09
LINC00473-201ENST00000444465 NUP160Q12769 1436 aa28.08■■■□□ 2.09
LINC00473-201ENST00000444465 ADAMTS12P58397 1594 aa28.04■■■□□ 2.08
LINC00473-201ENST00000444465 FHAD1B1AJZ9 1412 aa28.01■■■□□ 2.08
LINC00473-201ENST00000444465 ERICH3Q5RHP9 1530 aa28.01■■■□□ 2.07
LINC00473-201ENST00000444465 CEP170Q5SW79 1584 aa27.96■■■□□ 2.07
LINC00473-201ENST00000444465 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
LINC00473-201ENST00000444465 ERCC6L2Q5T890 1561 aa27.9■■■□□ 2.06
LINC00473-201ENST00000444465 JPH4Q96JJ6 628 aa27.73■■■□□ 2.03
LINC00473-201ENST00000444465 PRG4Q92954 1404 aaPredicted RBP27.71■■■□□ 2.03
LINC00473-201ENST00000444465 RUSC2Q8N2Y8 1516 aa27.65■■■□□ 2.02
LINC00473-201ENST00000444465 IGF1RP08069 1367 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms