RNA–Protein interactions for RNA: ENST00000444116.1

FBXO42-202, Transcript of F-box protein 42, humanhuman

TSL 5

Gene FBXO42, Length 945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-202ENST00000444116 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
FBXO42-202ENST00000444116 CCDC180Q9P1Z9 1646 aa28.68■■■□□ 2.18
FBXO42-202ENST00000444116 ABCC9O60706 1549 aa28.44■■■□□ 2.14
FBXO42-202ENST00000444116 RB1CC1Q8TDY2 1594 aa27.21■■□□□ 1.95
FBXO42-202ENST00000444116 DCAF8L2P0C7V8 631 aa27.18■■□□□ 1.94
FBXO42-202ENST00000444116 NACADO15069 1562 aa27.09■■□□□ 1.93
FBXO42-202ENST00000444116 MYO15BQ96JP2 1530 aa26.79■■□□□ 1.88
FBXO42-202ENST00000444116 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.87
FBXO42-202ENST00000444116 PABPN1Q86U42 306 aaKnown RBP eCLIP26.57■■□□□ 1.84
FBXO42-202ENST00000444116 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
FBXO42-202ENST00000444116 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
FBXO42-202ENST00000444116 DNAJC5BQ9UF47 199 aa26.35■■□□□ 1.81
FBXO42-202ENST00000444116 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
FBXO42-202ENST00000444116 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
FBXO42-202ENST00000444116 SHROOM4Q9ULL8 1493 aa26.06■■□□□ 1.76
FBXO42-202ENST00000444116 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
FBXO42-202ENST00000444116 CC2D2AQ9P2K1 1620 aa25.67■■□□□ 1.7
FBXO42-202ENST00000444116 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
FBXO42-202ENST00000444116 NCAPD3P42695 1498 aa25■■□□□ 1.59
FBXO42-202ENST00000444116 SMARCA4P51532 1647 aa25■■□□□ 1.59
FBXO42-202ENST00000444116 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
FBXO42-202ENST00000444116 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
FBXO42-202ENST00000444116 SMARCA2P51531 1590 aa24.94■■□□□ 1.58
FBXO42-202ENST00000444116 HMGXB3Q12766 1538 aa24.82■■□□□ 1.56
FBXO42-202ENST00000444116 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
FBXO42-202ENST00000444116 MROH2BQ7Z745 1585 aa24.77■■□□□ 1.56
FBXO42-202ENST00000444116 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
FBXO42-202ENST00000444116 ERCC6Q03468 1493 aa24.59■■□□□ 1.53
FBXO42-202ENST00000444116 NESP48681 1621 aa24.49■■□□□ 1.51
FBXO42-202ENST00000444116 WIZO95785 1651 aa24.48■■□□□ 1.51
FBXO42-202ENST00000444116 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
FBXO42-202ENST00000444116 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.5
FBXO42-202ENST00000444116 CUX2O14529 1486 aa24.38■■□□□ 1.49
FBXO42-202ENST00000444116 DNAJC5Q9H3Z4 198 aa24.3■■□□□ 1.48
FBXO42-202ENST00000444116 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
FBXO42-202ENST00000444116 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
FBXO42-202ENST00000444116 TOP2AP11388 1531 aaKnown RBP24.21■■□□□ 1.47
FBXO42-202ENST00000444116 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
FBXO42-202ENST00000444116 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.45
FBXO42-202ENST00000444116 CFTRP13569 1480 aa24.06■■□□□ 1.44
FBXO42-202ENST00000444116 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
FBXO42-202ENST00000444116 CEP164Q9UPV0 1460 aa24.01■■□□□ 1.43
FBXO42-202ENST00000444116 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
FBXO42-202ENST00000444116 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
FBXO42-202ENST00000444116 WDR62O43379 1518 aa23.92■■□□□ 1.42
FBXO42-202ENST00000444116 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
FBXO42-202ENST00000444116 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
FBXO42-202ENST00000444116 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
FBXO42-202ENST00000444116 ABCC8Q09428 1581 aa23.59■■□□□ 1.37
FBXO42-202ENST00000444116 TOPBP1Q92547 1522 aa23.57■■□□□ 1.36
FBXO42-202ENST00000444116 IFT140Q96RY7 1462 aa23.52■■□□□ 1.36
FBXO42-202ENST00000444116 DNMBPQ6XZF7 1577 aa23.5■■□□□ 1.35
FBXO42-202ENST00000444116 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
FBXO42-202ENST00000444116 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
FBXO42-202ENST00000444116 POLA1P09884 1462 aaPredicted RBP23.35■■□□□ 1.33
FBXO42-202ENST00000444116 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
FBXO42-202ENST00000444116 SOGA1O94964 1423 aa23.29■■□□□ 1.32
FBXO42-202ENST00000444116 TARBP1Q13395 1621 aaKnown RBP23.29■■□□□ 1.32
FBXO42-202ENST00000444116 EIF4G3O43432 1585 aaKnown RBP23.28■■□□□ 1.32
FBXO42-202ENST00000444116 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.321e-6■■■■□ 21
FBXO42-202ENST00000444116 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
FBXO42-202ENST00000444116 CUX1P39880 1505 aa23.26■■□□□ 1.31
FBXO42-202ENST00000444116 FGD5Q6ZNL6 1462 aa23.25■■□□□ 1.31
FBXO42-202ENST00000444116 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
FBXO42-202ENST00000444116 FBLN2P98095 1184 aa23.16■■□□□ 1.3
FBXO42-202ENST00000444116 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
FBXO42-202ENST00000444116 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
FBXO42-202ENST00000444116 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
FBXO42-202ENST00000444116 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
FBXO42-202ENST00000444116 CHD1O14646 1710 aa23.03■■□□□ 1.28
FBXO42-202ENST00000444116 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
FBXO42-202ENST00000444116 GAPVD1Q14C86 1478 aa23■■□□□ 1.27
FBXO42-202ENST00000444116 ABCA10Q8WWZ4 1543 aa23■■□□□ 1.27
FBXO42-202ENST00000444116 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
FBXO42-202ENST00000444116 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
FBXO42-202ENST00000444116 RIMBP3CA6NJZ7 1639 aa22.95■■□□□ 1.26
FBXO42-202ENST00000444116 RIMBP3BA6NNM3 1639 aa22.95■■□□□ 1.26
FBXO42-202ENST00000444116 RIMBP3Q9UFD9 1639 aa22.95■■□□□ 1.26
FBXO42-202ENST00000444116 BIVM-ERCC5R4GMW8 1640 aa22.95■■□□□ 1.26
FBXO42-202ENST00000444116 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
FBXO42-202ENST00000444116 ARHGEF11O15085 1522 aa22.93■■□□□ 1.26
FBXO42-202ENST00000444116 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
FBXO42-202ENST00000444116 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
FBXO42-202ENST00000444116 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
FBXO42-202ENST00000444116 CYB5RLQ6IPT4 315 aa22.83■■□□□ 1.25
FBXO42-202ENST00000444116 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
FBXO42-202ENST00000444116 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
FBXO42-202ENST00000444116 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
FBXO42-202ENST00000444116 GRIN2AQ12879 1464 aa22.72■■□□□ 1.23
FBXO42-202ENST00000444116 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
FBXO42-202ENST00000444116 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
FBXO42-202ENST00000444116 NUP160Q12769 1436 aa22.62■■□□□ 1.21
FBXO42-202ENST00000444116 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
FBXO42-202ENST00000444116 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
FBXO42-202ENST00000444116 TRHP20396 242 aaPredicted RBP22.55■■□□□ 1.2
FBXO42-202ENST00000444116 IGF1RP08069 1367 aa22.52■■□□□ 1.2
FBXO42-202ENST00000444116 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
FBXO42-202ENST00000444116 CUL7Q14999 1698 aa22.45■■□□□ 1.18
FBXO42-202ENST00000444116 SHROOM2Q13796 1616 aa22.44■■□□□ 1.18
FBXO42-202ENST00000444116 ERCC6L2Q5T890 1561 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms