RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 NISCHQ9Y2I1 1504 aa25.18■■□□□ 1.62
HDLBP-221ENST00000444092 ABCC9O60706 1549 aa22.71■■□□□ 1.23
HDLBP-221ENST00000444092 CCDC180Q9P1Z9 1646 aa22.67■■□□□ 1.22
HDLBP-221ENST00000444092 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
HDLBP-221ENST00000444092 NACADO15069 1562 aa21.42■■□□□ 1.02
HDLBP-221ENST00000444092 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
HDLBP-221ENST00000444092 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
HDLBP-221ENST00000444092 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
HDLBP-221ENST00000444092 PABPN1Q86U42 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
HDLBP-221ENST00000444092 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
HDLBP-221ENST00000444092 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
HDLBP-221ENST00000444092 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
HDLBP-221ENST00000444092 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
HDLBP-221ENST00000444092 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
HDLBP-221ENST00000444092 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
HDLBP-221ENST00000444092 CC2D2AQ9P2K1 1620 aa20.52■□□□□ 0.88
HDLBP-221ENST00000444092 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
HDLBP-221ENST00000444092 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
HDLBP-221ENST00000444092 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
HDLBP-221ENST00000444092 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
HDLBP-221ENST00000444092 ATAD2BQ9ULI0 1458 aa19.68■□□□□ 0.74
HDLBP-221ENST00000444092 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
HDLBP-221ENST00000444092 ERCC6Q03468 1493 aa19.64■□□□□ 0.73
HDLBP-221ENST00000444092 DNAJC5Q9H3Z4 198 aa19.62■□□□□ 0.73
HDLBP-221ENST00000444092 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
HDLBP-221ENST00000444092 CUX2O14529 1486 aa19.58■□□□□ 0.72
HDLBP-221ENST00000444092 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
HDLBP-221ENST00000444092 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
HDLBP-221ENST00000444092 NESP48681 1621 aa19.47■□□□□ 0.71
HDLBP-221ENST00000444092 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
HDLBP-221ENST00000444092 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
HDLBP-221ENST00000444092 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
HDLBP-221ENST00000444092 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
HDLBP-221ENST00000444092 KIF21AQ7Z4S6 1674 aa19.28■□□□□ 0.68
HDLBP-221ENST00000444092 PDS5BQ9NTI5 1447 aa19.24■□□□□ 0.67
HDLBP-221ENST00000444092 WIZO95785 1651 aa19.21■□□□□ 0.67
HDLBP-221ENST00000444092 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
HDLBP-221ENST00000444092 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
HDLBP-221ENST00000444092 WDR62O43379 1518 aa19.01■□□□□ 0.63
HDLBP-221ENST00000444092 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
HDLBP-221ENST00000444092 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
HDLBP-221ENST00000444092 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
HDLBP-221ENST00000444092 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
HDLBP-221ENST00000444092 CFTRP13569 1480 aa18.91■□□□□ 0.62
HDLBP-221ENST00000444092 PRDM2Q13029 1718 aa18.83■□□□□ 0.6
HDLBP-221ENST00000444092 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
HDLBP-221ENST00000444092 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
HDLBP-221ENST00000444092 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
HDLBP-221ENST00000444092 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
HDLBP-221ENST00000444092 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
HDLBP-221ENST00000444092 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
HDLBP-221ENST00000444092 ABCC8Q09428 1581 aa18.56■□□□□ 0.56
HDLBP-221ENST00000444092 ZNF608Q9ULD9 1512 aaPredicted RBP18.56■□□□□ 0.56
HDLBP-221ENST00000444092 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
HDLBP-221ENST00000444092 EIF4G3O43432 1585 aaKnown RBP18.49■□□□□ 0.55
HDLBP-221ENST00000444092 RIMBP3CA6NJZ7 1639 aa18.47■□□□□ 0.55
HDLBP-221ENST00000444092 RIMBP3BA6NNM3 1639 aa18.47■□□□□ 0.55
HDLBP-221ENST00000444092 RIMBP3Q9UFD9 1639 aa18.47■□□□□ 0.55
HDLBP-221ENST00000444092 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
HDLBP-221ENST00000444092 CHD1O14646 1710 aa18.4■□□□□ 0.54
HDLBP-221ENST00000444092 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.545e-11■■■■□ 24.2
HDLBP-221ENST00000444092 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
HDLBP-221ENST00000444092 ARHGEF11O15085 1522 aa18.39■□□□□ 0.53
HDLBP-221ENST00000444092 FBLN2P98095 1184 aa18.35■□□□□ 0.53
HDLBP-221ENST00000444092 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
HDLBP-221ENST00000444092 SOGA1O94964 1423 aa18.32■□□□□ 0.52
HDLBP-221ENST00000444092 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
HDLBP-221ENST00000444092 CYB5RLQ6IPT4 315 aa18.28■□□□□ 0.52
HDLBP-221ENST00000444092 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
HDLBP-221ENST00000444092 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
HDLBP-221ENST00000444092 CUX1P39880 1505 aa18.23■□□□□ 0.51
HDLBP-221ENST00000444092 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
HDLBP-221ENST00000444092 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
HDLBP-221ENST00000444092 ARAP1Q96P48 1450 aa18.18■□□□□ 0.5
HDLBP-221ENST00000444092 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
HDLBP-221ENST00000444092 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
HDLBP-221ENST00000444092 SUPT5HO00267 1087 aaKnown RBP18.16■□□□□ 0.5
HDLBP-221ENST00000444092 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
HDLBP-221ENST00000444092 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
HDLBP-221ENST00000444092 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
HDLBP-221ENST00000444092 CLASP1Q7Z460 1538 aa18.12■□□□□ 0.49
HDLBP-221ENST00000444092 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
HDLBP-221ENST00000444092 GAPVD1Q14C86 1478 aa18.09■□□□□ 0.49
HDLBP-221ENST00000444092 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
HDLBP-221ENST00000444092 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
HDLBP-221ENST00000444092 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
HDLBP-221ENST00000444092 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
HDLBP-221ENST00000444092 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
HDLBP-221ENST00000444092 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
HDLBP-221ENST00000444092 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
HDLBP-221ENST00000444092 CEP170Q5SW79 1584 aa17.86■□□□□ 0.45
HDLBP-221ENST00000444092 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
HDLBP-221ENST00000444092 ERCC6L2Q5T890 1561 aa17.84■□□□□ 0.45
HDLBP-221ENST00000444092 NUP160Q12769 1436 aa17.84■□□□□ 0.45
HDLBP-221ENST00000444092 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.45
HDLBP-221ENST00000444092 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
HDLBP-221ENST00000444092 JPH4Q96JJ6 628 aa17.7■□□□□ 0.42
HDLBP-221ENST00000444092 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
HDLBP-221ENST00000444092 AEBP2Q6ZN18 517 aaPredicted RBP17.66■□□□□ 0.42
HDLBP-221ENST00000444092 RUSC2Q8N2Y8 1516 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms