RNA–Protein interactions for RNA: ENST00000443302.5

PHF8-211, Transcript of PHD finger protein 8, humanhuman

TSL 1 (best)

Gene PHF8, Length 2,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-211ENST00000443302 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
PHF8-211ENST00000443302 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
PHF8-211ENST00000443302 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
PHF8-211ENST00000443302 ZCCHC6Q5VYS8 1495 aaKnown RBP19.08■□□□□ 0.65
PHF8-211ENST00000443302 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.65
PHF8-211ENST00000443302 HRCP23327 699 aa18.83■□□□□ 0.61
PHF8-211ENST00000443302 ABCC9O60706 1549 aa18.75■□□□□ 0.59
PHF8-211ENST00000443302 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
PHF8-211ENST00000443302 DCAF1Q9Y4B6 1507 aa18.55■□□□□ 0.56
PHF8-211ENST00000443302 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
PHF8-211ENST00000443302 PPARGC1BQ86YN6 1023 aaKnown RBP18.32■□□□□ 0.52
PHF8-211ENST00000443302 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
PHF8-211ENST00000443302 PCGF6Q9BYE7 350 aa18.29■□□□□ 0.52
PHF8-211ENST00000443302 MYO15BQ96JP2 1530 aa18.22■□□□□ 0.51
PHF8-211ENST00000443302 NACADO15069 1562 aa18.2■□□□□ 0.5
PHF8-211ENST00000443302 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
PHF8-211ENST00000443302 MYT1Q01538 1121 aa18■□□□□ 0.47
PHF8-211ENST00000443302 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
PHF8-211ENST00000443302 SCAF1Q9H7N4 1312 aaKnown RBP17.89■□□□□ 0.45
PHF8-211ENST00000443302 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
PHF8-211ENST00000443302 CECR2Q9BXF3 1484 aa17.84■□□□□ 0.45
PHF8-211ENST00000443302 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.44
PHF8-211ENST00000443302 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
PHF8-211ENST00000443302 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
PHF8-211ENST00000443302 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
PHF8-211ENST00000443302 MROH2BQ7Z745 1585 aa17.68■□□□□ 0.42
PHF8-211ENST00000443302 BICRAQ9NZM4 1560 aa17.64■□□□□ 0.41
PHF8-211ENST00000443302 WIZO95785 1651 aa17.56■□□□□ 0.4
PHF8-211ENST00000443302 LOC105371045A0A1W2PR82 267 aa17.49■□□□□ 0.39
PHF8-211ENST00000443302 BAZ1AQ9NRL2 1556 aaPredicted RBP17.46■□□□□ 0.39
PHF8-211ENST00000443302 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
PHF8-211ENST00000443302 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
PHF8-211ENST00000443302 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
PHF8-211ENST00000443302 GTF3C3Q9Y5Q9 886 aa17.27■□□□□ 0.36
PHF8-211ENST00000443302 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
PHF8-211ENST00000443302 TOP2AP11388 1531 aaKnown RBP17.2■□□□□ 0.34
PHF8-211ENST00000443302 CCDC88BA6NC98 1476 aa17.17■□□□□ 0.34
PHF8-211ENST00000443302 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
PHF8-211ENST00000443302 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
PHF8-211ENST00000443302 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
PHF8-211ENST00000443302 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
PHF8-211ENST00000443302 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
PHF8-211ENST00000443302 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
PHF8-211ENST00000443302 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
PHF8-211ENST00000443302 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
PHF8-211ENST00000443302 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
PHF8-211ENST00000443302 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
PHF8-211ENST00000443302 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
PHF8-211ENST00000443302 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
PHF8-211ENST00000443302 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
PHF8-211ENST00000443302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
PHF8-211ENST00000443302 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
PHF8-211ENST00000443302 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
PHF8-211ENST00000443302 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
PHF8-211ENST00000443302 SOGA1O94964 1423 aa16.7■□□□□ 0.26
PHF8-211ENST00000443302 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
PHF8-211ENST00000443302 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
PHF8-211ENST00000443302 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
PHF8-211ENST00000443302 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
PHF8-211ENST00000443302 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
PHF8-211ENST00000443302 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
PHF8-211ENST00000443302 CFTRP13569 1480 aa16.58■□□□□ 0.25
PHF8-211ENST00000443302 ANP32EQ9BTT0 268 aa16.58■□□□□ 0.24
PHF8-211ENST00000443302 NESP48681 1621 aa16.53■□□□□ 0.24
PHF8-211ENST00000443302 CADPSQ9ULU8 1353 aa16.53■□□□□ 0.24
PHF8-211ENST00000443302 MIER1Q8N108 512 aa16.52■□□□□ 0.24
PHF8-211ENST00000443302 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
PHF8-211ENST00000443302 CLSPNQ9HAW4 1339 aa16.49■□□□□ 0.23
PHF8-211ENST00000443302 CUX1P39880 1505 aa16.48■□□□□ 0.23
PHF8-211ENST00000443302 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
PHF8-211ENST00000443302 UBTFP17480 764 aaKnown RBP16.42■□□□□ 0.22
PHF8-211ENST00000443302 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
PHF8-211ENST00000443302 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
PHF8-211ENST00000443302 TSHZ2Q9NRE2 1034 aa16.39■□□□□ 0.21
PHF8-211ENST00000443302 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
PHF8-211ENST00000443302 RANGAP1P46060 587 aaPredicted RBP16.37■□□□□ 0.21
PHF8-211ENST00000443302 PRDM2Q13029 1718 aa16.35■□□□□ 0.21
PHF8-211ENST00000443302 EEA1Q15075 1411 aa16.34■□□□□ 0.21
PHF8-211ENST00000443302 RAPGEF2Q9Y4G8 1499 aa16.3■□□□□ 0.2
PHF8-211ENST00000443302 CEP162Q5TB80 1403 aa16.29■□□□□ 0.2
PHF8-211ENST00000443302 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
PHF8-211ENST00000443302 GOLGA3Q08378 1498 aa16.27■□□□□ 0.2
PHF8-211ENST00000443302 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
PHF8-211ENST00000443302 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
PHF8-211ENST00000443302 CUX2O14529 1486 aa16.23■□□□□ 0.19
PHF8-211ENST00000443302 CEP164Q9UPV0 1460 aa16.23■□□□□ 0.19
PHF8-211ENST00000443302 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
PHF8-211ENST00000443302 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
PHF8-211ENST00000443302 TOPBP1Q92547 1522 aa16.21■□□□□ 0.19
PHF8-211ENST00000443302 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
PHF8-211ENST00000443302 KIF21BO75037 1637 aa16.19■□□□□ 0.18
PHF8-211ENST00000443302 KIF21AQ7Z4S6 1674 aa16.18■□□□□ 0.18
PHF8-211ENST00000443302 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
PHF8-211ENST00000443302 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
PHF8-211ENST00000443302 DNMBPQ6XZF7 1577 aa16.15■□□□□ 0.18
PHF8-211ENST00000443302 PRXQ9BXM0 1461 aa16.15■□□□□ 0.18
PHF8-211ENST00000443302 IGF1RP08069 1367 aa16.15■□□□□ 0.18
PHF8-211ENST00000443302 CLIP1P30622 1438 aa16.11■□□□□ 0.17
PHF8-211ENST00000443302 PRKCSHP14314 528 aaPredicted RBP16.1■□□□□ 0.17
PHF8-211ENST00000443302 TDRD9Q8NDG6 1382 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms