RNA–Protein interactions for RNA: ENST00000442457.1

SLC6A8-205, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-205ENST00000442457 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.172e-35■■■□□ 17.1
SLC6A8-205ENST00000442457 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.181e-28■■■□□ 15
SLC6A8-205ENST00000442457 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.071e-25■■■■■ 40.5
SLC6A8-205ENST00000442457 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.28□□□□□ -0.63e-20■■□□□ 13
SLC6A8-205ENST00000442457 SF3B4Q15427 424 aaKnown RBP eCLIP11.03□□□□□ -0.645e-20■■■■□ 26.3
SLC6A8-205ENST00000442457 SND1Q7KZF4 910 aaKnown RBP eCLIP12.57□□□□□ -0.41e-18■□□□□ 8.8
SLC6A8-205ENST00000442457 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.75□□□□□ -0.052e-18■■■□□ 16.6
SLC6A8-205ENST00000442457 PRPF4O43172 522 aaKnown RBP eCLIP11.6□□□□□ -0.554e-17■■■■■ 27
SLC6A8-205ENST00000442457 METAP2P50579 478 aaKnown RBP eCLIP14.03□□□□□ -0.162e-16■■□□□ 12.2
SLC6A8-205ENST00000442457 RBFOX2O43251 390 aaKnown RBP eCLIP9.33□□□□□ -0.926e-15■□□□□ 9
SLC6A8-205ENST00000442457 SF3A3Q12874 501 aaKnown RBP eCLIP10.77□□□□□ -0.693e-14■■■■■ 29.7
SLC6A8-205ENST00000442457 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.81□□□□□ -0.26e-14■■■■■ 30.2
SLC6A8-205ENST00000442457 SUB1P53999 127 aaKnown RBP eCLIP9.09□□□□□ -0.954e-13■□□□□ 10.9
SLC6A8-205ENST00000442457 SMNDC1O75940 238 aaKnown RBP eCLIP10.98□□□□□ -0.655e-13■■■□□ 17.6
SLC6A8-205ENST00000442457 EFTUD2Q15029 972 aaKnown RBP eCLIP11.58□□□□□ -0.561e-12■■■■□ 19.4
SLC6A8-205ENST00000442457 RBM22Q9NW64 420 aaKnown RBP eCLIP12.21□□□□□ -0.452e-12■■■■□ 26.5
SLC6A8-205ENST00000442457 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.36□□□□□ -0.437e-12■■■■■ 45
SLC6A8-205ENST00000442457 PPIGQ13427 754 aaKnown RBP eCLIP14.03□□□□□ -0.169e-10■■■□□ 14.7
SLC6A8-205ENST00000442457 SF3B1O75533 1304 aaKnown RBP eCLIP13.38□□□□□ -0.271e-9■■□□□ 12.4
SLC6A8-205ENST00000442457 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.7□□□□□ -0.544e-9■■■□□ 18.7
SLC6A8-205ENST00000442457 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.51□□□□□ -0.094e-9■■■□□ 17
SLC6A8-205ENST00000442457 DDX42Q86XP3 938 aaKnown RBP eCLIP12.87□□□□□ -0.355e-9■■■■□ 23
SLC6A8-205ENST00000442457 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.731e-8■□□□□ 8.1
SLC6A8-205ENST00000442457 TIA1P31483 386 aaKnown RBP eCLIP11.24□□□□□ -0.614e-8■□□□□ 10.7
SLC6A8-205ENST00000442457 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.36□□□□□ -0.758e-8■■□□□ 12.1
SLC6A8-205ENST00000442457 ZRANB2O95218 330 aaKnown RBP eCLIP12.12□□□□□ -0.471e-7■■■■□ 19.3
SLC6A8-205ENST00000442457 IGF2BP3O00425 579 aaKnown RBP eCLIP14.95□□□□□ -0.022e-7■□□□□ 9.3
SLC6A8-205ENST00000442457 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.01□□□□□ -0.494e-7■■■■■ 30.4
SLC6A8-205ENST00000442457 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.26□□□□□ -0.614e-7■■□□□ 14
SLC6A8-205ENST00000442457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.02□□□□□ -0.335e-7■■■■□ 22.9
SLC6A8-205ENST00000442457 GTF2F1P35269 517 aaKnown RBP eCLIP13.55□□□□□ -0.248e-7■■■■□ 23.4
SLC6A8-205ENST00000442457 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■□□□ 12.6
SLC6A8-205ENST00000442457 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.54□□□□□ -0.563e-6■■□□□ 12.6
SLC6A8-205ENST00000442457 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.024e-6■■□□□ 12.4
SLC6A8-205ENST00000442457 RPS3P23396 243 aaKnown RBP eCLIP11.78□□□□□ -0.526e-6■■□□□ 13.1
Retrieved 35 of 35 RNA–protein pairs in 21.5 ms