RNA–Protein interactions for RNA: ENST00000442275.1

LCP1-204, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-204ENST00000442275 NISCHQ9Y2I1 1504 aa51.71■■■■■ 5.87
LCP1-204ENST00000442275 ABCC9O60706 1549 aa47.24■■■■■ 5.15
LCP1-204ENST00000442275 CCDC180Q9P1Z9 1646 aa46.61■■■■■ 5.05
LCP1-204ENST00000442275 DNAJC5BQ9UF47 199 aa44.75■■■■■ 4.75
LCP1-204ENST00000442275 RB1CC1Q8TDY2 1594 aa44.65■■■■■ 4.74
LCP1-204ENST00000442275 NACADO15069 1562 aa44.18■■■■■ 4.66
LCP1-204ENST00000442275 DCAF8L2P0C7V8 631 aa44.03■■■■■ 4.64
LCP1-204ENST00000442275 PABPN1Q86U42 306 aaKnown RBP eCLIP43.92■■■■■ 4.62
LCP1-204ENST00000442275 UNC13AQ9UPW8 1703 aa43.69■■■■■ 4.58
LCP1-204ENST00000442275 BICRAQ9NZM4 1560 aa43.37■■■■■ 4.53
LCP1-204ENST00000442275 MYO15BQ96JP2 1530 aa43.32■■■■■ 4.52
LCP1-204ENST00000442275 ZCCHC6Q5VYS8 1495 aaKnown RBP42.74■■■■■ 4.43
LCP1-204ENST00000442275 SHROOM4Q9ULL8 1493 aa42.63■■■■■ 4.42
LCP1-204ENST00000442275 CC2D2AQ9P2K1 1620 aa42.6■■■■■ 4.41
LCP1-204ENST00000442275 DCAF1Q9Y4B6 1507 aa42.6■■■■■ 4.41
LCP1-204ENST00000442275 CECR2Q9BXF3 1484 aa42.57■■■■■ 4.41
LCP1-204ENST00000442275 SCRIBQ14160 1630 aa42.55■■■■■ 4.4
LCP1-204ENST00000442275 EIF4G1Q04637 1599 aaKnown RBP42.36■■■■■ 4.37
LCP1-204ENST00000442275 DNAJC5Q9H3Z4 198 aa41.43■■■■■ 4.22
LCP1-204ENST00000442275 CUX2O14529 1486 aa40.83■■■■■ 4.13
LCP1-204ENST00000442275 ERCC6Q03468 1493 aa40.82■■■■■ 4.12
LCP1-204ENST00000442275 NCAPD3P42695 1498 aa40.78■■■■■ 4.12
LCP1-204ENST00000442275 ATAD2BQ9ULI0 1458 aa40.63■■■■■ 4.09
LCP1-204ENST00000442275 SMARCA2P51531 1590 aa40.48■■■■■ 4.07
LCP1-204ENST00000442275 SMARCA4P51532 1647 aa40.47■■■■■ 4.07
LCP1-204ENST00000442275 HMGXB3Q12766 1538 aa40.45■■■■■ 4.07
LCP1-204ENST00000442275 NESP48681 1621 aa40.43■■■■■ 4.06
LCP1-204ENST00000442275 BAZ1BQ9UIG0 1483 aaKnown RBP40.24■■■■■ 4.03
LCP1-204ENST00000442275 BAZ1AQ9NRL2 1556 aaPredicted RBP40.18■■■■■ 4.02
LCP1-204ENST00000442275 THOC2Q8NI27 1593 aaKnown RBP40.07■■■■■ 4.01
LCP1-204ENST00000442275 PEG3Q9GZU2 1588 aa40.01■■■■■ 4
LCP1-204ENST00000442275 LAMC3Q9Y6N6 1575 aa39.97■■■■□ 3.99
LCP1-204ENST00000442275 KIF21AQ7Z4S6 1674 aa39.89■■■■□ 3.98
LCP1-204ENST00000442275 MROH2BQ7Z745 1585 aa39.88■■■■□ 3.97
LCP1-204ENST00000442275 PDS5BQ9NTI5 1447 aa39.78■■■■□ 3.96
LCP1-204ENST00000442275 CADPSQ9ULU8 1353 aa39.56■■■■□ 3.92
LCP1-204ENST00000442275 TRIM41Q8WV44 630 aa39.54■■■■□ 3.92
LCP1-204ENST00000442275 MRC2Q9UBG0 1479 aa39.49■■■■□ 3.91
LCP1-204ENST00000442275 WIZO95785 1651 aa39.41■■■■□ 3.9
LCP1-204ENST00000442275 WDR62O43379 1518 aa39.38■■■■□ 3.89
LCP1-204ENST00000442275 CEP164Q9UPV0 1460 aa39.24■■■■□ 3.87
LCP1-204ENST00000442275 FANCD2Q9BXW9 1451 aa39.14■■■■□ 3.86
LCP1-204ENST00000442275 CFTRP13569 1480 aa38.98■■■■□ 3.83
LCP1-204ENST00000442275 OSCARQ8IYS5 282 aa38.92■■■■□ 3.82
LCP1-204ENST00000442275 URB2Q14146 1524 aaKnown RBP38.85■■■■□ 3.81
LCP1-204ENST00000442275 RSF1Q96T23 1441 aaPredicted RBP38.83■■■■□ 3.81
LCP1-204ENST00000442275 TOP2AP11388 1531 aaKnown RBP38.82■■■■□ 3.8
LCP1-204ENST00000442275 PRDM2Q13029 1718 aa38.58■■■■□ 3.77
LCP1-204ENST00000442275 RIMBP3CA6NJZ7 1639 aa38.51■■■■□ 3.76
LCP1-204ENST00000442275 RIMBP3BA6NNM3 1639 aa38.51■■■■□ 3.76
LCP1-204ENST00000442275 RIMBP3Q9UFD9 1639 aa38.51■■■■□ 3.76
LCP1-204ENST00000442275 ZNF608Q9ULD9 1512 aaPredicted RBP38.48■■■■□ 3.75
LCP1-204ENST00000442275 IFT140Q96RY7 1462 aa38.44■■■■□ 3.74
LCP1-204ENST00000442275 CCDC88BA6NC98 1476 aa38.4■■■■□ 3.74
LCP1-204ENST00000442275 TOPBP1Q92547 1522 aa38.33■■■■□ 3.73
LCP1-204ENST00000442275 ARHGEF11O15085 1522 aa38.32■■■■□ 3.72
LCP1-204ENST00000442275 EIF4G3O43432 1585 aaKnown RBP38.24■■■■□ 3.71
LCP1-204ENST00000442275 ABCC8Q09428 1581 aa38.15■■■■□ 3.7
LCP1-204ENST00000442275 DNMBPQ6XZF7 1577 aa38.14■■■■□ 3.7
LCP1-204ENST00000442275 CYB5RLQ6IPT4 315 aa38.11■■■■□ 3.69
LCP1-204ENST00000442275 CHD1O14646 1710 aa38.08■■■■□ 3.69
LCP1-204ENST00000442275 AQRO60306 1485 aaKnown RBP eCLIP38.08■■■■□ 3.69
LCP1-204ENST00000442275 TARBP1Q13395 1621 aaKnown RBP38.02■■■■□ 3.68
LCP1-204ENST00000442275 FBLN2P98095 1184 aa38■■■■□ 3.67
LCP1-204ENST00000442275 POLA1P09884 1462 aaPredicted RBP37.91■■■■□ 3.66
LCP1-204ENST00000442275 ARAP1Q96P48 1450 aa37.9■■■■□ 3.66
LCP1-204ENST00000442275 TRHP20396 242 aaPredicted RBP37.9■■■■□ 3.66
LCP1-204ENST00000442275 RAD54L2Q9Y4B4 1467 aa37.83■■■■□ 3.65
LCP1-204ENST00000442275 TDRD9Q8NDG6 1382 aaKnown RBP37.77■■■■□ 3.64
LCP1-204ENST00000442275 SOGA1O94964 1423 aa37.74■■■■□ 3.63
LCP1-204ENST00000442275 SNAPC4Q5SXM2 1469 aa37.67■■■■□ 3.62
LCP1-204ENST00000442275 FGD5Q6ZNL6 1462 aa37.62■■■■□ 3.61
LCP1-204ENST00000442275 CHMP7Q8WUX9 453 aaPredicted RBP37.57■■■■□ 3.6
LCP1-204ENST00000442275 CLASP1Q7Z460 1538 aa37.56■■■■□ 3.6
LCP1-204ENST00000442275 WDR97A6NE52 1622 aa37.54■■■■□ 3.6
LCP1-204ENST00000442275 SYNJ1O43426 1573 aa37.52■■■■□ 3.6
LCP1-204ENST00000442275 MAGI1Q96QZ7 1491 aaPredicted RBP37.49■■■■□ 3.59
LCP1-204ENST00000442275 CUX1P39880 1505 aa37.49■■■■□ 3.59
LCP1-204ENST00000442275 GRIN2BQ13224 1484 aa37.45■■■■□ 3.59
LCP1-204ENST00000442275 SYNJ2O15056 1496 aa37.39■■■■□ 3.58
LCP1-204ENST00000442275 PBRM1Q86U86 1689 aa37.31■■■■□ 3.56
LCP1-204ENST00000442275 GAPVD1Q14C86 1478 aa37.26■■■■□ 3.56
LCP1-204ENST00000442275 AEBP2Q6ZN18 517 aaPredicted RBP37.17■■■■□ 3.54
LCP1-204ENST00000442275 ABCA5Q8WWZ7 1642 aa37.13■■■■□ 3.53
LCP1-204ENST00000442275 ABCA10Q8WWZ4 1543 aa37.11■■■■□ 3.53
LCP1-204ENST00000442275 ERCC6L2Q5T890 1561 aa37.01■■■■□ 3.52
LCP1-204ENST00000442275 GRIN2AQ12879 1464 aa36.98■■■■□ 3.51
LCP1-204ENST00000442275 ADAMTS12P58397 1594 aa36.91■■■■□ 3.5
LCP1-204ENST00000442275 CEP170Q5SW79 1584 aa36.9■■■■□ 3.5
LCP1-204ENST00000442275 WRNQ14191 1432 aaPredicted RBP eCLIP36.88■■■■□ 3.49
LCP1-204ENST00000442275 SUPT5HO00267 1087 aaKnown RBP36.85■■■■□ 3.49
LCP1-204ENST00000442275 NUP160Q12769 1436 aa36.84■■■■□ 3.49
LCP1-204ENST00000442275 SHROOM2Q13796 1616 aa36.75■■■■□ 3.47
LCP1-204ENST00000442275 FHAD1B1AJZ9 1412 aa36.75■■■■□ 3.47
LCP1-204ENST00000442275 BIVM-ERCC5R4GMW8 1640 aa36.74■■■■□ 3.47
LCP1-204ENST00000442275 TOP2BQ02880 1626 aa36.73■■■■□ 3.47
LCP1-204ENST00000442275 ERICH3Q5RHP9 1530 aa36.64■■■■□ 3.46
LCP1-204ENST00000442275 PRG4Q92954 1404 aaPredicted RBP36.59■■■■□ 3.45
LCP1-204ENST00000442275 KIF13AQ9H1H9 1805 aa36.59■■■■□ 3.45
LCP1-204ENST00000442275 JPH4Q96JJ6 628 aa36.5■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms