RNA–Protein interactions for RNA: ENST00000442116.1

AP006222.1-201, humanhuman

TSL 5 BASIC

Gene AP006222.1, Length 1,292 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP006222.1-201ENST00000442116 AEBP2Q6ZN18 517 aaPredicted RBP31.64■■■□□ 2.66
AP006222.1-201ENST00000442116 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
AP006222.1-201ENST00000442116 SENP3Q9H4L4 574 aaPredicted RBP26.8■■□□□ 1.88
AP006222.1-201ENST00000442116 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
AP006222.1-201ENST00000442116 FOXD1Q16676 465 aa25.02■■□□□ 1.6
AP006222.1-201ENST00000442116 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
AP006222.1-201ENST00000442116 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
AP006222.1-201ENST00000442116 PPP6R1Q9UPN7 881 aa23.69■■□□□ 1.38
AP006222.1-201ENST00000442116 ADRA2BP18089 450 aa23.59■■□□□ 1.37
AP006222.1-201ENST00000442116 POTEDQ86YR6 584 aa23.55■■□□□ 1.36
AP006222.1-201ENST00000442116 PIAS4Q8N2W9 510 aaPredicted RBP23.39■■□□□ 1.33
AP006222.1-201ENST00000442116 MSH5O43196 834 aa23.19■■□□□ 1.3
AP006222.1-201ENST00000442116 ABCC9O60706 1549 aa22.49■■□□□ 1.19
AP006222.1-201ENST00000442116 CCDC180Q9P1Z9 1646 aa22.11■■□□□ 1.13
AP006222.1-201ENST00000442116 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
AP006222.1-201ENST00000442116 SCAF1Q9H7N4 1312 aaKnown RBP21.44■■□□□ 1.02
AP006222.1-201ENST00000442116 DNAJC5BQ9UF47 199 aa21.38■■□□□ 1.01
AP006222.1-201ENST00000442116 PPP4R3CPQ6ZMV5 832 aa21.37■■□□□ 1.01
AP006222.1-201ENST00000442116 DMRT2Q9Y5R5 561 aa21.35■■□□□ 1.01
AP006222.1-201ENST00000442116 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
AP006222.1-201ENST00000442116 NACADO15069 1562 aa21.02■□□□□ 0.95
AP006222.1-201ENST00000442116 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
AP006222.1-201ENST00000442116 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
AP006222.1-201ENST00000442116 CNKSR2Q8WXI2 1034 aa20.86■□□□□ 0.93
AP006222.1-201ENST00000442116 HOXD11P31277 338 aaPredicted RBP20.71■□□□□ 0.91
AP006222.1-201ENST00000442116 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
AP006222.1-201ENST00000442116 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
AP006222.1-201ENST00000442116 BICRAQ9NZM4 1560 aa20.6■□□□□ 0.89
AP006222.1-201ENST00000442116 RNF216Q9NWF9 866 aaPredicted RBP20.6■□□□□ 0.89
AP006222.1-201ENST00000442116 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
AP006222.1-201ENST00000442116 NPM3O75607 178 aaKnown RBP20.38■□□□□ 0.85
AP006222.1-201ENST00000442116 DCAF8L1A6NGE4 600 aa20.36■□□□□ 0.85
AP006222.1-201ENST00000442116 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
AP006222.1-201ENST00000442116 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
AP006222.1-201ENST00000442116 KCNA4P22459 653 aa20.3■□□□□ 0.84
AP006222.1-201ENST00000442116 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.83
AP006222.1-201ENST00000442116 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
AP006222.1-201ENST00000442116 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
AP006222.1-201ENST00000442116 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
AP006222.1-201ENST00000442116 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
AP006222.1-201ENST00000442116 RNF39Q9H2S5 420 aa19.89■□□□□ 0.77
AP006222.1-201ENST00000442116 DNAJC5Q9H3Z4 198 aa19.89■□□□□ 0.77
AP006222.1-201ENST00000442116 CACNB1Q02641 598 aaPredicted RBP19.69■□□□□ 0.74
AP006222.1-201ENST00000442116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.73
AP006222.1-201ENST00000442116 C1QBPQ07021 282 aaKnown RBP19.56■□□□□ 0.72
AP006222.1-201ENST00000442116 CUX2O14529 1486 aa19.51■□□□□ 0.71
AP006222.1-201ENST00000442116 ERCC6Q03468 1493 aa19.47■□□□□ 0.71
AP006222.1-201ENST00000442116 SLC4A2P04920 1241 aa19.42■□□□□ 0.7
AP006222.1-201ENST00000442116 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
AP006222.1-201ENST00000442116 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
AP006222.1-201ENST00000442116 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
AP006222.1-201ENST00000442116 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
AP006222.1-201ENST00000442116 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
AP006222.1-201ENST00000442116 NESP48681 1621 aa19.22■□□□□ 0.67
AP006222.1-201ENST00000442116 SMARCA4P51532 1647 aa19.19■□□□□ 0.66
AP006222.1-201ENST00000442116 SLC4A1APQ9BWU0 796 aaKnown RBP19.16■□□□□ 0.66
AP006222.1-201ENST00000442116 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
AP006222.1-201ENST00000442116 BAZ1AQ9NRL2 1556 aaPredicted RBP19.07■□□□□ 0.64
AP006222.1-201ENST00000442116 THOC2Q8NI27 1593 aaKnown RBP19.05■□□□□ 0.64
AP006222.1-201ENST00000442116 LAMC3Q9Y6N6 1575 aa19.02■□□□□ 0.63
AP006222.1-201ENST00000442116 PEG3Q9GZU2 1588 aa19■□□□□ 0.63
AP006222.1-201ENST00000442116 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
AP006222.1-201ENST00000442116 PDS5BQ9NTI5 1447 aa18.97■□□□□ 0.63
AP006222.1-201ENST00000442116 TRIM41Q8WV44 630 aa18.93■□□□□ 0.62
AP006222.1-201ENST00000442116 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
AP006222.1-201ENST00000442116 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.62
AP006222.1-201ENST00000442116 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
AP006222.1-201ENST00000442116 CAPN15O75808 1086 aa18.84■□□□□ 0.61
AP006222.1-201ENST00000442116 MRC2Q9UBG0 1479 aa18.8■□□□□ 0.6
AP006222.1-201ENST00000442116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
AP006222.1-201ENST00000442116 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
AP006222.1-201ENST00000442116 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
AP006222.1-201ENST00000442116 FOXD4L1Q9NU39 408 aa18.78■□□□□ 0.6
AP006222.1-201ENST00000442116 WDR62O43379 1518 aa18.74■□□□□ 0.59
AP006222.1-201ENST00000442116 ZBTB22O15209 634 aa18.74■□□□□ 0.59
AP006222.1-201ENST00000442116 DSG3P32926 999 aa18.74■□□□□ 0.59
AP006222.1-201ENST00000442116 SAMD1Q6SPF0 538 aaPredicted RBP18.74■□□□□ 0.59
AP006222.1-201ENST00000442116 APLP2Q06481 763 aa18.68■□□□□ 0.58
AP006222.1-201ENST00000442116 CEP164Q9UPV0 1460 aa18.66■□□□□ 0.58
AP006222.1-201ENST00000442116 WIZO95785 1651 aa18.64■□□□□ 0.57
AP006222.1-201ENST00000442116 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
AP006222.1-201ENST00000442116 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
AP006222.1-201ENST00000442116 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
AP006222.1-201ENST00000442116 ZNF219Q9P2Y4 722 aaPredicted RBP18.59■□□□□ 0.57
AP006222.1-201ENST00000442116 CFTRP13569 1480 aa18.53■□□□□ 0.56
AP006222.1-201ENST00000442116 ABCB7O75027 752 aa18.49■□□□□ 0.55
AP006222.1-201ENST00000442116 URB2Q14146 1524 aaKnown RBP18.46■□□□□ 0.55
AP006222.1-201ENST00000442116 ATF5Q9Y2D1 282 aaPredicted RBP18.44■□□□□ 0.54
AP006222.1-201ENST00000442116 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
AP006222.1-201ENST00000442116 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
AP006222.1-201ENST00000442116 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
AP006222.1-201ENST00000442116 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
AP006222.1-201ENST00000442116 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
AP006222.1-201ENST00000442116 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
AP006222.1-201ENST00000442116 ZNF608Q9ULD9 1512 aaPredicted RBP18.3■□□□□ 0.52
AP006222.1-201ENST00000442116 ARHGEF11O15085 1522 aa18.27■□□□□ 0.51
AP006222.1-201ENST00000442116 PRDM2Q13029 1718 aa18.25■□□□□ 0.51
AP006222.1-201ENST00000442116 POLA2Q14181 598 aa18.24■□□□□ 0.51
AP006222.1-201ENST00000442116 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
AP006222.1-201ENST00000442116 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms