RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 NISCHQ9Y2I1 1504 aa27.45■■□□□ 1.98
NELFE-205ENST00000441998 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
NELFE-205ENST00000441998 ABCC9O60706 1549 aa24.19■■□□□ 1.46
NELFE-205ENST00000441998 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.3
NELFE-205ENST00000441998 NACADO15069 1562 aa23.16■■□□□ 1.3
NELFE-205ENST00000441998 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
NELFE-205ENST00000441998 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
NELFE-205ENST00000441998 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
NELFE-205ENST00000441998 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
NELFE-205ENST00000441998 PABPN1Q86U42 306 aaKnown RBP eCLIP22.61■■□□□ 1.21
NELFE-205ENST00000441998 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
NELFE-205ENST00000441998 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
NELFE-205ENST00000441998 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
NELFE-205ENST00000441998 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
NELFE-205ENST00000441998 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
NELFE-205ENST00000441998 EIF4G1Q04637 1599 aaKnown RBP21.91■■□□□ 1.1
NELFE-205ENST00000441998 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
NELFE-205ENST00000441998 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.09
NELFE-205ENST00000441998 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
NELFE-205ENST00000441998 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
NELFE-205ENST00000441998 BAZ1AQ9NRL2 1556 aaPredicted RBP21.3■■□□□ 1
NELFE-205ENST00000441998 SMARCA2P51531 1590 aa21.29■■□□□ 1
NELFE-205ENST00000441998 SMARCA4P51532 1647 aa21.27■■□□□ 1
NELFE-205ENST00000441998 HMGXB3Q12766 1538 aa21.22■□□□□ 0.99
NELFE-205ENST00000441998 PEG3Q9GZU2 1588 aa21.18■□□□□ 0.98
NELFE-205ENST00000441998 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
NELFE-205ENST00000441998 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.97
NELFE-205ENST00000441998 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
NELFE-205ENST00000441998 CUX2O14529 1486 aa20.88■□□□□ 0.93
NELFE-205ENST00000441998 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
NELFE-205ENST00000441998 NESP48681 1621 aa20.82■□□□□ 0.92
NELFE-205ENST00000441998 LAMC3Q9Y6N6 1575 aa20.82■□□□□ 0.92
NELFE-205ENST00000441998 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
NELFE-205ENST00000441998 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
NELFE-205ENST00000441998 WIZO95785 1651 aa20.75■□□□□ 0.91
NELFE-205ENST00000441998 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
NELFE-205ENST00000441998 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
NELFE-205ENST00000441998 CFTRP13569 1480 aa20.58■□□□□ 0.89
NELFE-205ENST00000441998 THOC2Q8NI27 1593 aaKnown RBP20.55■□□□□ 0.88
NELFE-205ENST00000441998 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
NELFE-205ENST00000441998 KIF21AQ7Z4S6 1674 aa20.46■□□□□ 0.87
NELFE-205ENST00000441998 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
NELFE-205ENST00000441998 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
NELFE-205ENST00000441998 WDR62O43379 1518 aa20.43■□□□□ 0.86
NELFE-205ENST00000441998 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
NELFE-205ENST00000441998 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
NELFE-205ENST00000441998 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
NELFE-205ENST00000441998 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
NELFE-205ENST00000441998 IFT140Q96RY7 1462 aa20.1■□□□□ 0.81
NELFE-205ENST00000441998 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
NELFE-205ENST00000441998 OSCARQ8IYS5 282 aa20.03■□□□□ 0.8
NELFE-205ENST00000441998 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
NELFE-205ENST00000441998 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
NELFE-205ENST00000441998 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
NELFE-205ENST00000441998 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
NELFE-205ENST00000441998 SOGA1O94964 1423 aa19.87■□□□□ 0.77
NELFE-205ENST00000441998 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
NELFE-205ENST00000441998 AQRO60306 1485 aaKnown RBP eCLIP19.82■□□□□ 0.761e-10■■■■□ 20.9
NELFE-205ENST00000441998 CUX1P39880 1505 aa19.79■□□□□ 0.76
NELFE-205ENST00000441998 FGD5Q6ZNL6 1462 aa19.79■□□□□ 0.76
NELFE-205ENST00000441998 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
NELFE-205ENST00000441998 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
NELFE-205ENST00000441998 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
NELFE-205ENST00000441998 TDRD9Q8NDG6 1382 aaKnown RBP19.76■□□□□ 0.75
NELFE-205ENST00000441998 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
NELFE-205ENST00000441998 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
NELFE-205ENST00000441998 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
NELFE-205ENST00000441998 MAGI1Q96QZ7 1491 aaPredicted RBP19.66■□□□□ 0.74
NELFE-205ENST00000441998 FBLN2P98095 1184 aa19.65■□□□□ 0.74
NELFE-205ENST00000441998 ABCA10Q8WWZ4 1543 aa19.65■□□□□ 0.74
NELFE-205ENST00000441998 CHMP7Q8WUX9 453 aaPredicted RBP19.63■□□□□ 0.73
NELFE-205ENST00000441998 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
NELFE-205ENST00000441998 SNAPC4Q5SXM2 1469 aa19.6■□□□□ 0.73
NELFE-205ENST00000441998 SYNJ2O15056 1496 aa19.57■□□□□ 0.72
NELFE-205ENST00000441998 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
NELFE-205ENST00000441998 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
NELFE-205ENST00000441998 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
NELFE-205ENST00000441998 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
NELFE-205ENST00000441998 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
NELFE-205ENST00000441998 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
NELFE-205ENST00000441998 CHD1O14646 1710 aa19.49■□□□□ 0.71
NELFE-205ENST00000441998 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
NELFE-205ENST00000441998 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
NELFE-205ENST00000441998 CYB5RLQ6IPT4 315 aa19.46■□□□□ 0.71
NELFE-205ENST00000441998 CLASP1Q7Z460 1538 aa19.44■□□□□ 0.7
NELFE-205ENST00000441998 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
NELFE-205ENST00000441998 ERICH3Q5RHP9 1530 aa19.41■□□□□ 0.7
NELFE-205ENST00000441998 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
NELFE-205ENST00000441998 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
NELFE-205ENST00000441998 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
NELFE-205ENST00000441998 NUP160Q12769 1436 aa19.35■□□□□ 0.69
NELFE-205ENST00000441998 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
NELFE-205ENST00000441998 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
NELFE-205ENST00000441998 IGF1RP08069 1367 aa19.27■□□□□ 0.68
NELFE-205ENST00000441998 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
NELFE-205ENST00000441998 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
NELFE-205ENST00000441998 SHROOM2Q13796 1616 aa19.14■□□□□ 0.66
NELFE-205ENST00000441998 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
NELFE-205ENST00000441998 CARMIL1Q5VZK9 1371 aa19.13■□□□□ 0.65
NELFE-205ENST00000441998 KIAA0586Q9BVV6 1533 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms