RNA–Protein interactions for RNA: ENST00000441822.5

BUD23-210, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-210ENST00000441822 NISCHQ9Y2I1 1504 aa48.41■■■■■ 5.34
BUD23-210ENST00000441822 ABCC9O60706 1549 aa44.45■■■■■ 4.71
BUD23-210ENST00000441822 CCDC180Q9P1Z9 1646 aa43.73■■■■■ 4.59
BUD23-210ENST00000441822 DNAJC5BQ9UF47 199 aa42.49■■■■■ 4.39
BUD23-210ENST00000441822 RB1CC1Q8TDY2 1594 aa42.01■■■■■ 4.32
BUD23-210ENST00000441822 NACADO15069 1562 aa41.58■■■■■ 4.25
BUD23-210ENST00000441822 PABPN1Q86U42 306 aaKnown RBP eCLIP41.29■■■■■ 4.2
BUD23-210ENST00000441822 DCAF8L2P0C7V8 631 aa41.12■■■■■ 4.17
BUD23-210ENST00000441822 UNC13AQ9UPW8 1703 aa41.02■■■■■ 4.16
BUD23-210ENST00000441822 BICRAQ9NZM4 1560 aa40.84■■■■■ 4.13
BUD23-210ENST00000441822 MYO15BQ96JP2 1530 aa40.83■■■■■ 4.13
BUD23-210ENST00000441822 SHROOM4Q9ULL8 1493 aa40.25■■■■■ 4.03
BUD23-210ENST00000441822 CECR2Q9BXF3 1484 aa40.15■■■■■ 4.02
BUD23-210ENST00000441822 CC2D2AQ9P2K1 1620 aa40.13■■■■■ 4.02
BUD23-210ENST00000441822 DCAF1Q9Y4B6 1507 aa39.99■■■■□ 3.99
BUD23-210ENST00000441822 ZCCHC6Q5VYS8 1495 aaKnown RBP39.94■■■■□ 3.98
BUD23-210ENST00000441822 EIF4G1Q04637 1599 aaKnown RBP39.88■■■■□ 3.97
BUD23-210ENST00000441822 SCRIBQ14160 1630 aa39.72■■■■□ 3.95
BUD23-210ENST00000441822 DNAJC5Q9H3Z4 198 aa39.61■■■■□ 3.93
BUD23-210ENST00000441822 CUX2O14529 1486 aa38.68■■■■□ 3.78
BUD23-210ENST00000441822 NCAPD3P42695 1498 aa38.44■■■■□ 3.74
BUD23-210ENST00000441822 ERCC6Q03468 1493 aa38.41■■■■□ 3.74
BUD23-210ENST00000441822 ATAD2BQ9ULI0 1458 aa38.16■■■■□ 3.7
BUD23-210ENST00000441822 HMGXB3Q12766 1538 aa38.02■■■■□ 3.68
BUD23-210ENST00000441822 SMARCA2P51531 1590 aa37.99■■■■□ 3.67
BUD23-210ENST00000441822 NESP48681 1621 aa37.98■■■■□ 3.67
BUD23-210ENST00000441822 SMARCA4P51532 1647 aa37.88■■■■□ 3.65
BUD23-210ENST00000441822 THOC2Q8NI27 1593 aaKnown RBP37.74■■■■□ 3.63
BUD23-210ENST00000441822 BAZ1BQ9UIG0 1483 aaKnown RBP37.7■■■■□ 3.63
BUD23-210ENST00000441822 LAMC3Q9Y6N6 1575 aa37.63■■■■□ 3.61
BUD23-210ENST00000441822 BAZ1AQ9NRL2 1556 aaPredicted RBP37.6■■■■□ 3.61
BUD23-210ENST00000441822 PEG3Q9GZU2 1588 aa37.59■■■■□ 3.61
BUD23-210ENST00000441822 PDS5BQ9NTI5 1447 aa37.45■■■■□ 3.59
BUD23-210ENST00000441822 KIF21AQ7Z4S6 1674 aa37.42■■■■□ 3.58
BUD23-210ENST00000441822 TRIM41Q8WV44 630 aa37.4■■■■□ 3.58
BUD23-210ENST00000441822 MROH2BQ7Z745 1585 aa37.26■■■■□ 3.56
BUD23-210ENST00000441822 CADPSQ9ULU8 1353 aa37.21■■■■□ 3.55
BUD23-210ENST00000441822 MRC2Q9UBG0 1479 aa37.13■■■■□ 3.54
BUD23-210ENST00000441822 WDR62O43379 1518 aa37.09■■■■□ 3.53
BUD23-210ENST00000441822 OSCARQ8IYS5 282 aa36.83■■■■□ 3.49
BUD23-210ENST00000441822 CEP164Q9UPV0 1460 aa36.82■■■■□ 3.49
BUD23-210ENST00000441822 WIZO95785 1651 aa36.75■■■■□ 3.47
BUD23-210ENST00000441822 FANCD2Q9BXW9 1451 aa36.73■■■■□ 3.47
BUD23-210ENST00000441822 CFTRP13569 1480 aa36.62■■■■□ 3.45
BUD23-210ENST00000441822 URB2Q14146 1524 aaKnown RBP36.48■■■■□ 3.43
BUD23-210ENST00000441822 RIMBP3CA6NJZ7 1639 aa36.34■■■■□ 3.41
BUD23-210ENST00000441822 RIMBP3BA6NNM3 1639 aa36.34■■■■□ 3.41
BUD23-210ENST00000441822 RIMBP3Q9UFD9 1639 aa36.34■■■■□ 3.41
BUD23-210ENST00000441822 RSF1Q96T23 1441 aaPredicted RBP36.25■■■■□ 3.39
BUD23-210ENST00000441822 TOP2AP11388 1531 aaKnown RBP36.24■■■■□ 3.39
BUD23-210ENST00000441822 ARHGEF11O15085 1522 aa36.17■■■■□ 3.38
BUD23-210ENST00000441822 IFT140Q96RY7 1462 aa36.15■■■■□ 3.38
BUD23-210ENST00000441822 ZNF608Q9ULD9 1512 aaPredicted RBP36.14■■■■□ 3.38
BUD23-210ENST00000441822 PRDM2Q13029 1718 aa36.09■■■■□ 3.37
BUD23-210ENST00000441822 CYB5RLQ6IPT4 315 aa35.98■■■■□ 3.35
BUD23-210ENST00000441822 TOPBP1Q92547 1522 aa35.96■■■■□ 3.35
BUD23-210ENST00000441822 ABCC8Q09428 1581 aa35.89■■■■□ 3.34
BUD23-210ENST00000441822 CCDC88BA6NC98 1476 aa35.88■■■■□ 3.33
BUD23-210ENST00000441822 EIF4G3O43432 1585 aaKnown RBP35.86■■■■□ 3.33
BUD23-210ENST00000441822 TRHP20396 242 aaPredicted RBP35.78■■■■□ 3.32
BUD23-210ENST00000441822 ARAP1Q96P48 1450 aa35.76■■■■□ 3.32
BUD23-210ENST00000441822 AQRO60306 1485 aaKnown RBP eCLIP35.73■■■■□ 3.313e-9■■■■■ 36.3
BUD23-210ENST00000441822 DNMBPQ6XZF7 1577 aa35.73■■■■□ 3.31
BUD23-210ENST00000441822 CHD1O14646 1710 aa35.73■■■■□ 3.31
BUD23-210ENST00000441822 TARBP1Q13395 1621 aaKnown RBP35.7■■■■□ 3.31
BUD23-210ENST00000441822 FBLN2P98095 1184 aa35.61■■■■□ 3.29
BUD23-210ENST00000441822 POLA1P09884 1462 aaPredicted RBP35.54■■■■□ 3.28
BUD23-210ENST00000441822 RAD54L2Q9Y4B4 1467 aa35.41■■■■□ 3.26
BUD23-210ENST00000441822 TDRD9Q8NDG6 1382 aaKnown RBP35.4■■■■□ 3.26
BUD23-210ENST00000441822 SOGA1O94964 1423 aa35.39■■■■□ 3.26
BUD23-210ENST00000441822 CLASP1Q7Z460 1538 aa35.37■■■■□ 3.25
BUD23-210ENST00000441822 SNAPC4Q5SXM2 1469 aa35.31■■■■□ 3.24
BUD23-210ENST00000441822 WDR97A6NE52 1622 aa35.31■■■■□ 3.24
BUD23-210ENST00000441822 AEBP2Q6ZN18 517 aaPredicted RBP35.29■■■■□ 3.24
BUD23-210ENST00000441822 CHMP7Q8WUX9 453 aaPredicted RBP35.28■■■■□ 3.24
BUD23-210ENST00000441822 SYNJ1O43426 1573 aa35.25■■■■□ 3.23
BUD23-210ENST00000441822 MAGI1Q96QZ7 1491 aaPredicted RBP35.24■■■■□ 3.23
BUD23-210ENST00000441822 FGD5Q6ZNL6 1462 aa35.19■■■■□ 3.22
BUD23-210ENST00000441822 GRIN2BQ13224 1484 aa35.16■■■■□ 3.22
BUD23-210ENST00000441822 SYNJ2O15056 1496 aa35.13■■■■□ 3.21
BUD23-210ENST00000441822 GAPVD1Q14C86 1478 aa35.04■■■■□ 3.2
BUD23-210ENST00000441822 CUX1P39880 1505 aa35.04■■■■□ 3.2
BUD23-210ENST00000441822 PBRM1Q86U86 1689 aa34.88■■■■□ 3.17
BUD23-210ENST00000441822 ABCA10Q8WWZ4 1543 aa34.79■■■■□ 3.16
BUD23-210ENST00000441822 ABCA5Q8WWZ7 1642 aa34.76■■■■□ 3.15
BUD23-210ENST00000441822 ERCC6L2Q5T890 1561 aa34.73■■■■□ 3.15
BUD23-210ENST00000441822 GRIN2AQ12879 1464 aa34.7■■■■□ 3.15
BUD23-210ENST00000441822 NUP160Q12769 1436 aa34.64■■■■□ 3.14
BUD23-210ENST00000441822 CEP170Q5SW79 1584 aa34.63■■■■□ 3.13
BUD23-210ENST00000441822 SHROOM2Q13796 1616 aa34.55■■■■□ 3.12
BUD23-210ENST00000441822 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
BUD23-210ENST00000441822 WRNQ14191 1432 aaPredicted RBP eCLIP34.49■■■■□ 3.11
BUD23-210ENST00000441822 KIF13AQ9H1H9 1805 aa34.48■■■■□ 3.11
BUD23-210ENST00000441822 FHAD1B1AJZ9 1412 aa34.47■■■■□ 3.11
BUD23-210ENST00000441822 PRG4Q92954 1404 aaPredicted RBP34.34■■■■□ 3.09
BUD23-210ENST00000441822 ERICH3Q5RHP9 1530 aa34.33■■■■□ 3.09
BUD23-210ENST00000441822 JPH4Q96JJ6 628 aa34.32■■■■□ 3.08
BUD23-210ENST00000441822 TOP2BQ02880 1626 aa34.28■■■■□ 3.08
BUD23-210ENST00000441822 BIVM-ERCC5R4GMW8 1640 aa34.28■■■■□ 3.08
BUD23-210ENST00000441822 ABCC10Q5T3U5 1492 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms