RNA–Protein interactions for RNA: ENST00000441818.5

TRMU-204, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 1 (best)

Gene TRMU, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-204ENST00000441818 NISCHQ9Y2I1 1504 aa48.47■■■■■ 5.35
TRMU-204ENST00000441818 CCDC180Q9P1Z9 1646 aa42.34■■■■■ 4.37
TRMU-204ENST00000441818 ZCCHC6Q5VYS8 1495 aaKnown RBP40.69■■■■■ 4.1
TRMU-204ENST00000441818 ABCC9O60706 1549 aa40.12■■■■■ 4.01
TRMU-204ENST00000441818 DCAF1Q9Y4B6 1507 aa40.11■■■■■ 4.01
TRMU-204ENST00000441818 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4.01
TRMU-204ENST00000441818 MYO15BQ96JP2 1530 aa39.68■■■■□ 3.94
TRMU-204ENST00000441818 NACADO15069 1562 aa39.47■■■■□ 3.91
TRMU-204ENST00000441818 SHROOM4Q9ULL8 1493 aa39.41■■■■□ 3.9
TRMU-204ENST00000441818 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
TRMU-204ENST00000441818 SCRIBQ14160 1630 aa38.88■■■■□ 3.82
TRMU-204ENST00000441818 UNC13AQ9UPW8 1703 aa38.32■■■■□ 3.73
TRMU-204ENST00000441818 BICRAQ9NZM4 1560 aa37.94■■■■□ 3.66
TRMU-204ENST00000441818 SUPT5HO00267 1087 aaKnown RBP37.89■■■■□ 3.66
TRMU-204ENST00000441818 PABPN1Q86U42 306 aaKnown RBP eCLIP37.81■■■■□ 3.64
TRMU-204ENST00000441818 CECR2Q9BXF3 1484 aa37.65■■■■□ 3.62
TRMU-204ENST00000441818 RSF1Q96T23 1441 aaPredicted RBP37.55■■■■□ 3.6
TRMU-204ENST00000441818 BAZ1AQ9NRL2 1556 aaPredicted RBP37.45■■■■□ 3.59
TRMU-204ENST00000441818 MROH2BQ7Z745 1585 aa37.42■■■■□ 3.58
TRMU-204ENST00000441818 SMARCA4P51532 1647 aa37.28■■■■□ 3.56
TRMU-204ENST00000441818 WIZO95785 1651 aa37.1■■■■□ 3.53
TRMU-204ENST00000441818 PEG3Q9GZU2 1588 aa36.84■■■■□ 3.49
TRMU-204ENST00000441818 EIF4G1Q04637 1599 aaKnown RBP36.83■■■■□ 3.49
TRMU-204ENST00000441818 TOP2AP11388 1531 aaKnown RBP36.74■■■■□ 3.47
TRMU-204ENST00000441818 ATAD2BQ9ULI0 1458 aa36.71■■■■□ 3.47
TRMU-204ENST00000441818 SMARCA2P51531 1590 aa36.7■■■■□ 3.47
TRMU-204ENST00000441818 BAZ1BQ9UIG0 1483 aaKnown RBP36.5■■■■□ 3.43
TRMU-204ENST00000441818 NCAPD3P42695 1498 aa36.43■■■■□ 3.42
TRMU-204ENST00000441818 HMGXB3Q12766 1538 aa36.36■■■■□ 3.41
TRMU-204ENST00000441818 CCDC88BA6NC98 1476 aa36.36■■■■□ 3.41
TRMU-204ENST00000441818 CC2D2AQ9P2K1 1620 aa36.31■■■■□ 3.4
TRMU-204ENST00000441818 CHIC1Q5VXU3 224 aa36.21■■■■□ 3.39
TRMU-204ENST00000441818 TRIM41Q8WV44 630 aa35.66■■■■□ 3.3
TRMU-204ENST00000441818 CFTRP13569 1480 aa35.58■■■■□ 3.29
TRMU-204ENST00000441818 ABCC8Q09428 1581 aa35.53■■■■□ 3.28
TRMU-204ENST00000441818 CADPSQ9ULU8 1353 aa35.49■■■■□ 3.27
TRMU-204ENST00000441818 DNAJC5BQ9UF47 199 aa35.47■■■■□ 3.27
TRMU-204ENST00000441818 PRDM2Q13029 1718 aa35.38■■■■□ 3.25
TRMU-204ENST00000441818 WRNQ14191 1432 aaPredicted RBP eCLIP35.36■■■■□ 3.25
TRMU-204ENST00000441818 LAMC3Q9Y6N6 1575 aa35.22■■■■□ 3.23
TRMU-204ENST00000441818 SYNJ1O43426 1573 aa35.19■■■■□ 3.22
TRMU-204ENST00000441818 NESP48681 1621 aa35.17■■■■□ 3.22
TRMU-204ENST00000441818 FANCD2Q9BXW9 1451 aa35.09■■■■□ 3.21
TRMU-204ENST00000441818 TOP2BQ02880 1626 aa35.08■■■■□ 3.21
TRMU-204ENST00000441818 BIVM-ERCC5R4GMW8 1640 aa35.04■■■■□ 3.2
TRMU-204ENST00000441818 CUX1P39880 1505 aa35■■■■□ 3.19
TRMU-204ENST00000441818 FAM9AQ8IZU1 332 aaPredicted RBP34.97■■■■□ 3.19
TRMU-204ENST00000441818 PDS5BQ9NTI5 1447 aa34.96■■■■□ 3.19
TRMU-204ENST00000441818 CEP164Q9UPV0 1460 aa34.88■■■■□ 3.17
TRMU-204ENST00000441818 SOGA1O94964 1423 aa34.85■■■■□ 3.17
TRMU-204ENST00000441818 EEA1Q15075 1411 aa34.82■■■■□ 3.16
TRMU-204ENST00000441818 LOC105371045A0A1W2PR82 267 aa34.79■■■■□ 3.16
TRMU-204ENST00000441818 KIF21AQ7Z4S6 1674 aa34.75■■■■□ 3.15
TRMU-204ENST00000441818 DNMBPQ6XZF7 1577 aa34.75■■■■□ 3.15
TRMU-204ENST00000441818 RUSC2Q8N2Y8 1516 aa34.71■■■■□ 3.15
TRMU-204ENST00000441818 TOPBP1Q92547 1522 aa34.69■■■■□ 3.14
TRMU-204ENST00000441818 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
TRMU-204ENST00000441818 URB2Q14146 1524 aaKnown RBP34.63■■■■□ 3.13
TRMU-204ENST00000441818 CSRNP3Q8WYN3 585 aa34.62■■■■□ 3.13
TRMU-204ENST00000441818 POLA1P09884 1462 aaPredicted RBP34.51■■■■□ 3.12
TRMU-204ENST00000441818 KIF27Q86VH2 1401 aa34.49■■■■□ 3.11
TRMU-204ENST00000441818 MRC2Q9UBG0 1479 aa34.49■■■■□ 3.11
TRMU-204ENST00000441818 EHMT2Q96KQ7 1210 aa34.45■■■■□ 3.11
TRMU-204ENST00000441818 ERCC6Q03468 1493 aa34.44■■■■□ 3.1
TRMU-204ENST00000441818 CUX2O14529 1486 aa34.41■■■■□ 3.1
TRMU-204ENST00000441818 RAD54L2Q9Y4B4 1467 aa34.38■■■■□ 3.09
TRMU-204ENST00000441818 ABCA10Q8WWZ4 1543 aa34.36■■■■□ 3.09
TRMU-204ENST00000441818 KIF21BO75037 1637 aa34.34■■■■□ 3.09
TRMU-204ENST00000441818 WDR62O43379 1518 aa34.31■■■■□ 3.08
TRMU-204ENST00000441818 GOLGA3Q08378 1498 aa34.31■■■■□ 3.08
TRMU-204ENST00000441818 WDR97A6NE52 1622 aa34.23■■■■□ 3.07
TRMU-204ENST00000441818 THOC2Q8NI27 1593 aaKnown RBP34.22■■■■□ 3.07
TRMU-204ENST00000441818 PRXQ9BXM0 1461 aa34.21■■■■□ 3.07
TRMU-204ENST00000441818 IGF1RP08069 1367 aa34.18■■■■□ 3.06
TRMU-204ENST00000441818 TNIKQ9UKE5 1360 aa34.18■■■■□ 3.06
TRMU-204ENST00000441818 TARBP1Q13395 1621 aaKnown RBP34.17■■■■□ 3.06
TRMU-204ENST00000441818 UBTFP17480 764 aaKnown RBP34.17■■■■□ 3.06
TRMU-204ENST00000441818 RAPGEF2Q9Y4G8 1499 aa34.15■■■■□ 3.06
TRMU-204ENST00000441818 ERICH3Q5RHP9 1530 aa34.15■■■■□ 3.06
TRMU-204ENST00000441818 TDRD9Q8NDG6 1382 aaKnown RBP34.07■■■■□ 3.04
TRMU-204ENST00000441818 ABCA5Q8WWZ7 1642 aa34.07■■■■□ 3.04
TRMU-204ENST00000441818 IFT140Q96RY7 1462 aa34.06■■■■□ 3.04
TRMU-204ENST00000441818 GAPVD1Q14C86 1478 aa34.03■■■■□ 3.04
TRMU-204ENST00000441818 CARMIL1Q5VZK9 1371 aa34.02■■■■□ 3.04
TRMU-204ENST00000441818 CEP162Q5TB80 1403 aa33.97■■■■□ 3.03
TRMU-204ENST00000441818 CUL7Q14999 1698 aa33.94■■■■□ 3.02
TRMU-204ENST00000441818 AQRO60306 1485 aaKnown RBP eCLIP33.87■■■■□ 3.014e-7■■■■□ 21
TRMU-204ENST00000441818 ZNF608Q9ULD9 1512 aaPredicted RBP33.84■■■■□ 3.01
TRMU-204ENST00000441818 PBRM1Q86U86 1689 aa33.82■■■■□ 3
TRMU-204ENST00000441818 GRIN2BQ13224 1484 aa33.79■■■■□ 3
TRMU-204ENST00000441818 CLIP1P30622 1438 aa33.75■■■□□ 2.99
TRMU-204ENST00000441818 EIF4G3O43432 1585 aaKnown RBP33.74■■■□□ 2.99
TRMU-204ENST00000441818 FHAD1B1AJZ9 1412 aa33.66■■■□□ 2.98
TRMU-204ENST00000441818 ADAMTS12P58397 1594 aa33.64■■■□□ 2.98
TRMU-204ENST00000441818 RANGAP1P46060 587 aaPredicted RBP33.61■■■□□ 2.97
TRMU-204ENST00000441818 SNAPC4Q5SXM2 1469 aa33.55■■■□□ 2.96
TRMU-204ENST00000441818 CTTNBP2Q8WZ74 1663 aa33.53■■■□□ 2.96
TRMU-204ENST00000441818 MAGI1Q96QZ7 1491 aaPredicted RBP33.52■■■□□ 2.96
TRMU-204ENST00000441818 ARHGAP35Q9NRY4 1499 aa33.44■■■□□ 2.94
TRMU-204ENST00000441818 VPS8Q8N3P4 1428 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms