RNA–Protein interactions for RNA: ENST00000441698.6

MSRA-203, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 2 BASIC

Gene MSRA, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-203ENST00000441698 NISCHQ9Y2I1 1504 aa35.77■■■■□ 3.32
MSRA-203ENST00000441698 CCDC180Q9P1Z9 1646 aa32.02■■■□□ 2.72
MSRA-203ENST00000441698 ABCC9O60706 1549 aa31.88■■■□□ 2.69
MSRA-203ENST00000441698 RB1CC1Q8TDY2 1594 aa30.42■■■□□ 2.46
MSRA-203ENST00000441698 NACADO15069 1562 aa30.25■■■□□ 2.43
MSRA-203ENST00000441698 DCAF8L2P0C7V8 631 aa30.15■■■□□ 2.42
MSRA-203ENST00000441698 MYO15BQ96JP2 1530 aa29.9■■■□□ 2.38
MSRA-203ENST00000441698 DNAJC5BQ9UF47 199 aa29.74■■■□□ 2.35
MSRA-203ENST00000441698 PABPN1Q86U42 306 aaKnown RBP eCLIP29.71■■■□□ 2.35
MSRA-203ENST00000441698 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
MSRA-203ENST00000441698 UNC13AQ9UPW8 1703 aa29.67■■■□□ 2.34
MSRA-203ENST00000441698 DCAF1Q9Y4B6 1507 aa29.57■■■□□ 2.32
MSRA-203ENST00000441698 BICRAQ9NZM4 1560 aa29.5■■■□□ 2.31
MSRA-203ENST00000441698 SCRIBQ14160 1630 aa29.19■■■□□ 2.26
MSRA-203ENST00000441698 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
MSRA-203ENST00000441698 CC2D2AQ9P2K1 1620 aa28.8■■■□□ 2.2
MSRA-203ENST00000441698 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
MSRA-203ENST00000441698 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
MSRA-203ENST00000441698 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
MSRA-203ENST00000441698 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
MSRA-203ENST00000441698 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
MSRA-203ENST00000441698 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
MSRA-203ENST00000441698 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
MSRA-203ENST00000441698 HMGXB3Q12766 1538 aa27.74■■■□□ 2.03
MSRA-203ENST00000441698 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
MSRA-203ENST00000441698 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
MSRA-203ENST00000441698 ERCC6Q03468 1493 aa27.55■■■□□ 2
MSRA-203ENST00000441698 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
MSRA-203ENST00000441698 CUX2O14529 1486 aa27.44■■□□□ 1.98
MSRA-203ENST00000441698 NESP48681 1621 aa27.42■■□□□ 1.98
MSRA-203ENST00000441698 LAMC3Q9Y6N6 1575 aa27.27■■□□□ 1.96
MSRA-203ENST00000441698 DNAJC5Q9H3Z4 198 aa27.23■■□□□ 1.95
MSRA-203ENST00000441698 WIZO95785 1651 aa27.21■■□□□ 1.95
MSRA-203ENST00000441698 PDS5BQ9NTI5 1447 aa27.14■■□□□ 1.93
MSRA-203ENST00000441698 THOC2Q8NI27 1593 aaKnown RBP27.11■■□□□ 1.93
MSRA-203ENST00000441698 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
MSRA-203ENST00000441698 RSF1Q96T23 1441 aaPredicted RBP27.06■■□□□ 1.92
MSRA-203ENST00000441698 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
MSRA-203ENST00000441698 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
MSRA-203ENST00000441698 MRC2Q9UBG0 1479 aa26.87■■□□□ 1.89
MSRA-203ENST00000441698 CFTRP13569 1480 aa26.81■■□□□ 1.88
MSRA-203ENST00000441698 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
MSRA-203ENST00000441698 FANCD2Q9BXW9 1451 aa26.79■■□□□ 1.88
MSRA-203ENST00000441698 WDR62O43379 1518 aa26.79■■□□□ 1.88
MSRA-203ENST00000441698 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
MSRA-203ENST00000441698 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
MSRA-203ENST00000441698 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
MSRA-203ENST00000441698 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
MSRA-203ENST00000441698 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
MSRA-203ENST00000441698 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
MSRA-203ENST00000441698 OSCARQ8IYS5 282 aa26.22■■□□□ 1.79
MSRA-203ENST00000441698 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
MSRA-203ENST00000441698 ZNF608Q9ULD9 1512 aaPredicted RBP26.18■■□□□ 1.78
MSRA-203ENST00000441698 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
MSRA-203ENST00000441698 EIF4G3O43432 1585 aaKnown RBP26.04■■□□□ 1.76
MSRA-203ENST00000441698 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
MSRA-203ENST00000441698 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
MSRA-203ENST00000441698 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
MSRA-203ENST00000441698 AQRO60306 1485 aaKnown RBP eCLIP25.98■■□□□ 1.75
MSRA-203ENST00000441698 SOGA1O94964 1423 aa25.93■■□□□ 1.74
MSRA-203ENST00000441698 RAD54L2Q9Y4B4 1467 aa25.92■■□□□ 1.74
MSRA-203ENST00000441698 FGD5Q6ZNL6 1462 aa25.89■■□□□ 1.73
MSRA-203ENST00000441698 CUX1P39880 1505 aa25.88■■□□□ 1.73
MSRA-203ENST00000441698 TDRD9Q8NDG6 1382 aaKnown RBP25.85■■□□□ 1.73
MSRA-203ENST00000441698 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
MSRA-203ENST00000441698 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
MSRA-203ENST00000441698 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
MSRA-203ENST00000441698 FBLN2P98095 1184 aa25.8■■□□□ 1.72
MSRA-203ENST00000441698 WDR97A6NE52 1622 aa25.8■■□□□ 1.72
MSRA-203ENST00000441698 CHD1O14646 1710 aa25.8■■□□□ 1.72
MSRA-203ENST00000441698 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
MSRA-203ENST00000441698 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
MSRA-203ENST00000441698 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
MSRA-203ENST00000441698 MAGI1Q96QZ7 1491 aaPredicted RBP25.67■■□□□ 1.7
MSRA-203ENST00000441698 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
MSRA-203ENST00000441698 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
MSRA-203ENST00000441698 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
MSRA-203ENST00000441698 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
MSRA-203ENST00000441698 SYNJ2O15056 1496 aa25.59■■□□□ 1.69
MSRA-203ENST00000441698 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
MSRA-203ENST00000441698 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
MSRA-203ENST00000441698 PBRM1Q86U86 1689 aa25.55■■□□□ 1.68
MSRA-203ENST00000441698 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
MSRA-203ENST00000441698 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
MSRA-203ENST00000441698 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
MSRA-203ENST00000441698 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
MSRA-203ENST00000441698 BIVM-ERCC5R4GMW8 1640 aa25.5■■□□□ 1.67
MSRA-203ENST00000441698 GRIN2AQ12879 1464 aa25.35■■□□□ 1.65
MSRA-203ENST00000441698 ADAMTS12P58397 1594 aa25.35■■□□□ 1.65
MSRA-203ENST00000441698 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
MSRA-203ENST00000441698 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
MSRA-203ENST00000441698 TRHP20396 242 aaPredicted RBP25.27■■□□□ 1.64
MSRA-203ENST00000441698 NUP160Q12769 1436 aa25.26■■□□□ 1.63
MSRA-203ENST00000441698 CEP170Q5SW79 1584 aa25.23■■□□□ 1.63
MSRA-203ENST00000441698 ERCC6L2Q5T890 1561 aa25.13■■□□□ 1.61
MSRA-203ENST00000441698 SHROOM2Q13796 1616 aa25.11■■□□□ 1.61
MSRA-203ENST00000441698 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
MSRA-203ENST00000441698 JPH4Q96JJ6 628 aa25.01■■□□□ 1.59
MSRA-203ENST00000441698 IGF1RP08069 1367 aa25.01■■□□□ 1.59
MSRA-203ENST00000441698 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms