RNA–Protein interactions for RNA: ENST00000441298.5

ZNF3-209, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-209ENST00000441298 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
ZNF3-209ENST00000441298 CCDC180Q9P1Z9 1646 aa28■■■□□ 2.07
ZNF3-209ENST00000441298 ABCC9O60706 1549 aa27.72■■■□□ 2.03
ZNF3-209ENST00000441298 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
ZNF3-209ENST00000441298 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
ZNF3-209ENST00000441298 NACADO15069 1562 aa26.37■■□□□ 1.81
ZNF3-209ENST00000441298 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
ZNF3-209ENST00000441298 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
ZNF3-209ENST00000441298 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
ZNF3-209ENST00000441298 DCAF1Q9Y4B6 1507 aa25.87■■□□□ 1.73
ZNF3-209ENST00000441298 PABPN1Q86U42 306 aaKnown RBP eCLIP25.86■■□□□ 1.73
ZNF3-209ENST00000441298 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
ZNF3-209ENST00000441298 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
ZNF3-209ENST00000441298 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
ZNF3-209ENST00000441298 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
ZNF3-209ENST00000441298 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
ZNF3-209ENST00000441298 CC2D2AQ9P2K1 1620 aa25.03■■□□□ 1.6
ZNF3-209ENST00000441298 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.58
ZNF3-209ENST00000441298 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
ZNF3-209ENST00000441298 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
ZNF3-209ENST00000441298 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
ZNF3-209ENST00000441298 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
ZNF3-209ENST00000441298 NCAPD3P42695 1498 aa24.29■■□□□ 1.48
ZNF3-209ENST00000441298 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
ZNF3-209ENST00000441298 HMGXB3Q12766 1538 aa24.2■■□□□ 1.46
ZNF3-209ENST00000441298 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
ZNF3-209ENST00000441298 PEG3Q9GZU2 1588 aa24.11■■□□□ 1.45
ZNF3-209ENST00000441298 WIZO95785 1651 aa23.98■■□□□ 1.43
ZNF3-209ENST00000441298 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
ZNF3-209ENST00000441298 NESP48681 1621 aa23.91■■□□□ 1.42
ZNF3-209ENST00000441298 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
ZNF3-209ENST00000441298 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
ZNF3-209ENST00000441298 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
ZNF3-209ENST00000441298 CUX2O14529 1486 aa23.67■■□□□ 1.38
ZNF3-209ENST00000441298 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.37
ZNF3-209ENST00000441298 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
ZNF3-209ENST00000441298 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
ZNF3-209ENST00000441298 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
ZNF3-209ENST00000441298 CFTRP13569 1480 aa23.42■■□□□ 1.34
ZNF3-209ENST00000441298 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
ZNF3-209ENST00000441298 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
ZNF3-209ENST00000441298 FANCD2Q9BXW9 1451 aa23.4■■□□□ 1.34
ZNF3-209ENST00000441298 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
ZNF3-209ENST00000441298 WDR62O43379 1518 aa23.32■■□□□ 1.32
ZNF3-209ENST00000441298 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
ZNF3-209ENST00000441298 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
ZNF3-209ENST00000441298 URB2Q14146 1524 aaKnown RBP23.17■■□□□ 1.3
ZNF3-209ENST00000441298 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
ZNF3-209ENST00000441298 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
ZNF3-209ENST00000441298 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
ZNF3-209ENST00000441298 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
ZNF3-209ENST00000441298 IFT140Q96RY7 1462 aa22.89■■□□□ 1.25
ZNF3-209ENST00000441298 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
ZNF3-209ENST00000441298 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
ZNF3-209ENST00000441298 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
ZNF3-209ENST00000441298 CUX1P39880 1505 aa22.73■■□□□ 1.23
ZNF3-209ENST00000441298 TARBP1Q13395 1621 aaKnown RBP22.73■■□□□ 1.23
ZNF3-209ENST00000441298 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
ZNF3-209ENST00000441298 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
ZNF3-209ENST00000441298 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.222e-7■■■■■ 35.8
ZNF3-209ENST00000441298 SOGA1O94964 1423 aa22.66■■□□□ 1.22
ZNF3-209ENST00000441298 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
ZNF3-209ENST00000441298 TDRD9Q8NDG6 1382 aaKnown RBP22.6■■□□□ 1.21
ZNF3-209ENST00000441298 CHD1O14646 1710 aa22.54■■□□□ 1.2
ZNF3-209ENST00000441298 FBLN2P98095 1184 aa22.52■■□□□ 1.2
ZNF3-209ENST00000441298 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
ZNF3-209ENST00000441298 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
ZNF3-209ENST00000441298 SNAPC4Q5SXM2 1469 aa22.49■■□□□ 1.19
ZNF3-209ENST00000441298 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
ZNF3-209ENST00000441298 SYNJ1O43426 1573 aa22.48■■□□□ 1.19
ZNF3-209ENST00000441298 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
ZNF3-209ENST00000441298 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
ZNF3-209ENST00000441298 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
ZNF3-209ENST00000441298 PBRM1Q86U86 1689 aa22.44■■□□□ 1.18
ZNF3-209ENST00000441298 ABCA10Q8WWZ4 1543 aa22.42■■□□□ 1.18
ZNF3-209ENST00000441298 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
ZNF3-209ENST00000441298 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.18
ZNF3-209ENST00000441298 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
ZNF3-209ENST00000441298 RIMBP3CA6NJZ7 1639 aa22.37■■□□□ 1.17
ZNF3-209ENST00000441298 RIMBP3BA6NNM3 1639 aa22.37■■□□□ 1.17
ZNF3-209ENST00000441298 RIMBP3Q9UFD9 1639 aa22.37■■□□□ 1.17
ZNF3-209ENST00000441298 CHMP7Q8WUX9 453 aaPredicted RBP22.35■■□□□ 1.17
ZNF3-209ENST00000441298 ARHGEF11O15085 1522 aa22.32■■□□□ 1.16
ZNF3-209ENST00000441298 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
ZNF3-209ENST00000441298 ADAMTS12P58397 1594 aa22.23■■□□□ 1.15
ZNF3-209ENST00000441298 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
ZNF3-209ENST00000441298 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
ZNF3-209ENST00000441298 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
ZNF3-209ENST00000441298 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
ZNF3-209ENST00000441298 ARAP1Q96P48 1450 aa22.14■■□□□ 1.13
ZNF3-209ENST00000441298 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
ZNF3-209ENST00000441298 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
ZNF3-209ENST00000441298 KIF27Q86VH2 1401 aa22.05■■□□□ 1.12
ZNF3-209ENST00000441298 NUP160Q12769 1436 aa22.03■■□□□ 1.12
ZNF3-209ENST00000441298 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.1
ZNF3-209ENST00000441298 CUL7Q14999 1698 aa21.95■■□□□ 1.1
ZNF3-209ENST00000441298 IGF1RP08069 1367 aa21.92■■□□□ 1.1
ZNF3-209ENST00000441298 SHROOM2Q13796 1616 aa21.9■■□□□ 1.1
ZNF3-209ENST00000441298 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
ZNF3-209ENST00000441298 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms