RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 NISCHQ9Y2I1 1504 aa42.99■■■■■ 4.47
FAM20B-202ENST00000440702 ABCC9O60706 1549 aa38.74■■■■□ 3.79
FAM20B-202ENST00000440702 CCDC180Q9P1Z9 1646 aa38.62■■■■□ 3.77
FAM20B-202ENST00000440702 RB1CC1Q8TDY2 1594 aa36.79■■■■□ 3.48
FAM20B-202ENST00000440702 NACADO15069 1562 aa36.49■■■■□ 3.43
FAM20B-202ENST00000440702 DCAF8L2P0C7V8 631 aa36.4■■■■□ 3.42
FAM20B-202ENST00000440702 DNAJC5BQ9UF47 199 aa36.33■■■■□ 3.41
FAM20B-202ENST00000440702 PABPN1Q86U42 306 aaKnown RBP eCLIP36.05■■■■□ 3.36
FAM20B-202ENST00000440702 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
FAM20B-202ENST00000440702 MYO15BQ96JP2 1530 aa35.89■■■■□ 3.34
FAM20B-202ENST00000440702 BICRAQ9NZM4 1560 aa35.73■■■■□ 3.31
FAM20B-202ENST00000440702 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
FAM20B-202ENST00000440702 DCAF1Q9Y4B6 1507 aa35.43■■■■□ 3.26
FAM20B-202ENST00000440702 SCRIBQ14160 1630 aa35.29■■■■□ 3.24
FAM20B-202ENST00000440702 SHROOM4Q9ULL8 1493 aa35.15■■■■□ 3.22
FAM20B-202ENST00000440702 CC2D2AQ9P2K1 1620 aa34.97■■■■□ 3.19
FAM20B-202ENST00000440702 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
FAM20B-202ENST00000440702 EIF4G1Q04637 1599 aaKnown RBP34.86■■■■□ 3.17
FAM20B-202ENST00000440702 NCAPD3P42695 1498 aa33.65■■■□□ 2.98
FAM20B-202ENST00000440702 SMARCA4P51532 1647 aa33.6■■■□□ 2.97
FAM20B-202ENST00000440702 ATAD2BQ9ULI0 1458 aa33.59■■■□□ 2.97
FAM20B-202ENST00000440702 SMARCA2P51531 1590 aa33.51■■■□□ 2.95
FAM20B-202ENST00000440702 ERCC6Q03468 1493 aa33.45■■■□□ 2.95
FAM20B-202ENST00000440702 HMGXB3Q12766 1538 aa33.44■■■□□ 2.94
FAM20B-202ENST00000440702 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
FAM20B-202ENST00000440702 DNAJC5Q9H3Z4 198 aa33.34■■■□□ 2.93
FAM20B-202ENST00000440702 CUX2O14529 1486 aa33.33■■■□□ 2.93
FAM20B-202ENST00000440702 BAZ1BQ9UIG0 1483 aaKnown RBP33.31■■■□□ 2.92
FAM20B-202ENST00000440702 NESP48681 1621 aa33.27■■■□□ 2.92
FAM20B-202ENST00000440702 PEG3Q9GZU2 1588 aa33.18■■■□□ 2.9
FAM20B-202ENST00000440702 MROH2BQ7Z745 1585 aa33.17■■■□□ 2.9
FAM20B-202ENST00000440702 LAMC3Q9Y6N6 1575 aa32.95■■■□□ 2.86
FAM20B-202ENST00000440702 THOC2Q8NI27 1593 aaKnown RBP32.92■■■□□ 2.86
FAM20B-202ENST00000440702 KIF21AQ7Z4S6 1674 aa32.87■■■□□ 2.85
FAM20B-202ENST00000440702 WIZO95785 1651 aa32.81■■■□□ 2.84
FAM20B-202ENST00000440702 PDS5BQ9NTI5 1447 aa32.75■■■□□ 2.83
FAM20B-202ENST00000440702 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
FAM20B-202ENST00000440702 MRC2Q9UBG0 1479 aa32.51■■■□□ 2.79
FAM20B-202ENST00000440702 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
FAM20B-202ENST00000440702 WDR62O43379 1518 aa32.42■■■□□ 2.78
FAM20B-202ENST00000440702 CEP164Q9UPV0 1460 aa32.38■■■□□ 2.77
FAM20B-202ENST00000440702 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
FAM20B-202ENST00000440702 FANCD2Q9BXW9 1451 aa32.34■■■□□ 2.77
FAM20B-202ENST00000440702 CFTRP13569 1480 aa32.27■■■□□ 2.76
FAM20B-202ENST00000440702 URB2Q14146 1524 aaKnown RBP32.09■■■□□ 2.73
FAM20B-202ENST00000440702 PRDM2Q13029 1718 aa32.05■■■□□ 2.72
FAM20B-202ENST00000440702 TRIM41Q8WV44 630 aa32■■■□□ 2.71
FAM20B-202ENST00000440702 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
FAM20B-202ENST00000440702 OSCARQ8IYS5 282 aa31.78■■■□□ 2.68
FAM20B-202ENST00000440702 TOPBP1Q92547 1522 aa31.72■■■□□ 2.67
FAM20B-202ENST00000440702 ZNF608Q9ULD9 1512 aaPredicted RBP31.71■■■□□ 2.67
FAM20B-202ENST00000440702 IFT140Q96RY7 1462 aa31.71■■■□□ 2.67
FAM20B-202ENST00000440702 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
FAM20B-202ENST00000440702 ABCC8Q09428 1581 aa31.57■■■□□ 2.64
FAM20B-202ENST00000440702 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
FAM20B-202ENST00000440702 RIMBP3CA6NJZ7 1639 aa31.48■■■□□ 2.63
FAM20B-202ENST00000440702 RIMBP3BA6NNM3 1639 aa31.48■■■□□ 2.63
FAM20B-202ENST00000440702 RIMBP3Q9UFD9 1639 aa31.48■■■□□ 2.63
FAM20B-202ENST00000440702 TARBP1Q13395 1621 aaKnown RBP31.44■■■□□ 2.62
FAM20B-202ENST00000440702 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.62
FAM20B-202ENST00000440702 POLA1P09884 1462 aaPredicted RBP31.39■■■□□ 2.62
FAM20B-202ENST00000440702 CHD1O14646 1710 aa31.38■■■□□ 2.61
FAM20B-202ENST00000440702 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
FAM20B-202ENST00000440702 RAD54L2Q9Y4B4 1467 aa31.31■■■□□ 2.6
FAM20B-202ENST00000440702 FBLN2P98095 1184 aa31.25■■■□□ 2.59
FAM20B-202ENST00000440702 SOGA1O94964 1423 aa31.23■■■□□ 2.59
FAM20B-202ENST00000440702 FGD5Q6ZNL6 1462 aa31.21■■■□□ 2.59
FAM20B-202ENST00000440702 TDRD9Q8NDG6 1382 aaKnown RBP31.2■■■□□ 2.59
FAM20B-202ENST00000440702 CUX1P39880 1505 aa31.18■■■□□ 2.58
FAM20B-202ENST00000440702 SNAPC4Q5SXM2 1469 aa31.11■■■□□ 2.57
FAM20B-202ENST00000440702 CYB5RLQ6IPT4 315 aa31.1■■■□□ 2.57
FAM20B-202ENST00000440702 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
FAM20B-202ENST00000440702 ARAP1Q96P48 1450 aa31.04■■■□□ 2.56
FAM20B-202ENST00000440702 SUPT5HO00267 1087 aaKnown RBP31.04■■■□□ 2.56
FAM20B-202ENST00000440702 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
FAM20B-202ENST00000440702 MAGI1Q96QZ7 1491 aaPredicted RBP30.96■■■□□ 2.55
FAM20B-202ENST00000440702 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
FAM20B-202ENST00000440702 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
FAM20B-202ENST00000440702 CLASP1Q7Z460 1538 aa30.93■■■□□ 2.54
FAM20B-202ENST00000440702 SYNJ1O43426 1573 aa30.92■■■□□ 2.54
FAM20B-202ENST00000440702 SYNJ2O15056 1496 aa30.87■■■□□ 2.53
FAM20B-202ENST00000440702 GAPVD1Q14C86 1478 aa30.86■■■□□ 2.53
FAM20B-202ENST00000440702 TRHP20396 242 aaPredicted RBP30.81■■■□□ 2.52
FAM20B-202ENST00000440702 ABCA10Q8WWZ4 1543 aa30.81■■■□□ 2.52
FAM20B-202ENST00000440702 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
FAM20B-202ENST00000440702 WRNQ14191 1432 aaPredicted RBP eCLIP30.66■■■□□ 2.5
FAM20B-202ENST00000440702 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
FAM20B-202ENST00000440702 TOP2BQ02880 1626 aa30.64■■■□□ 2.5
FAM20B-202ENST00000440702 ADAMTS12P58397 1594 aa30.6■■■□□ 2.49
FAM20B-202ENST00000440702 GRIN2AQ12879 1464 aa30.58■■■□□ 2.49
FAM20B-202ENST00000440702 CEP170Q5SW79 1584 aa30.51■■■□□ 2.47
FAM20B-202ENST00000440702 ERCC6L2Q5T890 1561 aa30.5■■■□□ 2.47
FAM20B-202ENST00000440702 FHAD1B1AJZ9 1412 aa30.45■■■□□ 2.46
FAM20B-202ENST00000440702 NUP160Q12769 1436 aa30.45■■■□□ 2.46
FAM20B-202ENST00000440702 ERICH3Q5RHP9 1530 aa30.42■■■□□ 2.46
FAM20B-202ENST00000440702 SHROOM2Q13796 1616 aa30.35■■■□□ 2.45
FAM20B-202ENST00000440702 PRG4Q92954 1404 aaPredicted RBP30.2■■■□□ 2.42
FAM20B-202ENST00000440702 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
FAM20B-202ENST00000440702 JPH4Q96JJ6 628 aa30.13■■■□□ 2.41
FAM20B-202ENST00000440702 KIF13AQ9H1H9 1805 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms