RNA–Protein interactions for RNA: ENST00000440319.5

GTF3C5-207, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5

Gene GTF3C5, Length 920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-207ENST00000440319 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
GTF3C5-207ENST00000440319 ABCC9O60706 1549 aa27.03■■□□□ 1.92
GTF3C5-207ENST00000440319 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
GTF3C5-207ENST00000440319 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
GTF3C5-207ENST00000440319 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
GTF3C5-207ENST00000440319 DNAJC5BQ9UF47 199 aa25.62■■□□□ 1.69
GTF3C5-207ENST00000440319 NACADO15069 1562 aa25.53■■□□□ 1.68
GTF3C5-207ENST00000440319 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.63
GTF3C5-207ENST00000440319 MYO15BQ96JP2 1530 aa25.19■■□□□ 1.62
GTF3C5-207ENST00000440319 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
GTF3C5-207ENST00000440319 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
GTF3C5-207ENST00000440319 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.57
GTF3C5-207ENST00000440319 BICRAQ9NZM4 1560 aa24.86■■□□□ 1.57
GTF3C5-207ENST00000440319 SCRIBQ14160 1630 aa24.64■■□□□ 1.53
GTF3C5-207ENST00000440319 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
GTF3C5-207ENST00000440319 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
GTF3C5-207ENST00000440319 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.5
GTF3C5-207ENST00000440319 EIF4G1Q04637 1599 aaKnown RBP24.3■■□□□ 1.48
GTF3C5-207ENST00000440319 DNAJC5Q9H3Z4 198 aa23.82■■□□□ 1.4
GTF3C5-207ENST00000440319 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
GTF3C5-207ENST00000440319 ATAD2BQ9ULI0 1458 aa23.54■■□□□ 1.36
GTF3C5-207ENST00000440319 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
GTF3C5-207ENST00000440319 CUX2O14529 1486 aa23.47■■□□□ 1.35
GTF3C5-207ENST00000440319 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
GTF3C5-207ENST00000440319 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
GTF3C5-207ENST00000440319 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
GTF3C5-207ENST00000440319 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
GTF3C5-207ENST00000440319 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
GTF3C5-207ENST00000440319 MROH2BQ7Z745 1585 aa23.24■■□□□ 1.31
GTF3C5-207ENST00000440319 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
GTF3C5-207ENST00000440319 NESP48681 1621 aa23.18■■□□□ 1.3
GTF3C5-207ENST00000440319 THOC2Q8NI27 1593 aaKnown RBP23.01■■□□□ 1.27
GTF3C5-207ENST00000440319 LAMC3Q9Y6N6 1575 aa23.01■■□□□ 1.27
GTF3C5-207ENST00000440319 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
GTF3C5-207ENST00000440319 WIZO95785 1651 aa22.93■■□□□ 1.26
GTF3C5-207ENST00000440319 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
GTF3C5-207ENST00000440319 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
GTF3C5-207ENST00000440319 RSF1Q96T23 1441 aaPredicted RBP22.83■■□□□ 1.25
GTF3C5-207ENST00000440319 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
GTF3C5-207ENST00000440319 TOP2AP11388 1531 aaKnown RBP22.68■■□□□ 1.22
GTF3C5-207ENST00000440319 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
GTF3C5-207ENST00000440319 TRIM41Q8WV44 630 aa22.65■■□□□ 1.22
GTF3C5-207ENST00000440319 FANCD2Q9BXW9 1451 aa22.65■■□□□ 1.22
GTF3C5-207ENST00000440319 CFTRP13569 1480 aa22.64■■□□□ 1.21
GTF3C5-207ENST00000440319 WDR62O43379 1518 aa22.61■■□□□ 1.21
GTF3C5-207ENST00000440319 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
GTF3C5-207ENST00000440319 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
GTF3C5-207ENST00000440319 OSCARQ8IYS5 282 aa22.28■■□□□ 1.16
GTF3C5-207ENST00000440319 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
GTF3C5-207ENST00000440319 IFT140Q96RY7 1462 aa22.21■■□□□ 1.15
GTF3C5-207ENST00000440319 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
GTF3C5-207ENST00000440319 TOPBP1Q92547 1522 aa22.2■■□□□ 1.14
GTF3C5-207ENST00000440319 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
GTF3C5-207ENST00000440319 RIMBP3CA6NJZ7 1639 aa22.13■■□□□ 1.13
GTF3C5-207ENST00000440319 RIMBP3BA6NNM3 1639 aa22.13■■□□□ 1.13
GTF3C5-207ENST00000440319 RIMBP3Q9UFD9 1639 aa22.13■■□□□ 1.13
GTF3C5-207ENST00000440319 DNMBPQ6XZF7 1577 aa22.1■■□□□ 1.13
GTF3C5-207ENST00000440319 SUPT5HO00267 1087 aaKnown RBP22.04■■□□□ 1.12
GTF3C5-207ENST00000440319 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.114e-7■■■■□ 23.6
GTF3C5-207ENST00000440319 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
GTF3C5-207ENST00000440319 ARHGEF11O15085 1522 aa21.98■■□□□ 1.11
GTF3C5-207ENST00000440319 EIF4G3O43432 1585 aaKnown RBP21.96■■□□□ 1.11
GTF3C5-207ENST00000440319 FBLN2P98095 1184 aa21.95■■□□□ 1.1
GTF3C5-207ENST00000440319 SOGA1O94964 1423 aa21.95■■□□□ 1.1
GTF3C5-207ENST00000440319 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
GTF3C5-207ENST00000440319 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
GTF3C5-207ENST00000440319 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.1
GTF3C5-207ENST00000440319 CHD1O14646 1710 aa21.88■■□□□ 1.09
GTF3C5-207ENST00000440319 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
GTF3C5-207ENST00000440319 CUX1P39880 1505 aa21.83■■□□□ 1.09
GTF3C5-207ENST00000440319 CHMP7Q8WUX9 453 aaPredicted RBP21.79■■□□□ 1.08
GTF3C5-207ENST00000440319 CYB5RLQ6IPT4 315 aa21.78■■□□□ 1.08
GTF3C5-207ENST00000440319 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
GTF3C5-207ENST00000440319 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
GTF3C5-207ENST00000440319 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
GTF3C5-207ENST00000440319 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
GTF3C5-207ENST00000440319 MAGI1Q96QZ7 1491 aaPredicted RBP21.69■■□□□ 1.06
GTF3C5-207ENST00000440319 TRHP20396 242 aaPredicted RBP21.67■■□□□ 1.06
GTF3C5-207ENST00000440319 GAPVD1Q14C86 1478 aa21.65■■□□□ 1.06
GTF3C5-207ENST00000440319 SYNJ2O15056 1496 aa21.62■■□□□ 1.05
GTF3C5-207ENST00000440319 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
GTF3C5-207ENST00000440319 ABCA10Q8WWZ4 1543 aa21.61■■□□□ 1.05
GTF3C5-207ENST00000440319 SYNJ1O43426 1573 aa21.59■■□□□ 1.05
GTF3C5-207ENST00000440319 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
GTF3C5-207ENST00000440319 PBRM1Q86U86 1689 aa21.51■■□□□ 1.03
GTF3C5-207ENST00000440319 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
GTF3C5-207ENST00000440319 TOP2BQ02880 1626 aa21.49■■□□□ 1.03
GTF3C5-207ENST00000440319 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
GTF3C5-207ENST00000440319 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
GTF3C5-207ENST00000440319 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.02
GTF3C5-207ENST00000440319 ADAMTS12P58397 1594 aa21.36■■□□□ 1.01
GTF3C5-207ENST00000440319 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
GTF3C5-207ENST00000440319 NUP160Q12769 1436 aa21.33■■□□□ 1.01
GTF3C5-207ENST00000440319 AEBP2Q6ZN18 517 aaPredicted RBP21.33■■□□□ 1.01
GTF3C5-207ENST00000440319 CEP170Q5SW79 1584 aa21.28■■□□□ 1
GTF3C5-207ENST00000440319 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
GTF3C5-207ENST00000440319 ERCC6L2Q5T890 1561 aa21.22■□□□□ 0.99
GTF3C5-207ENST00000440319 KIF27Q86VH2 1401 aa21.19■□□□□ 0.98
GTF3C5-207ENST00000440319 PRG4Q92954 1404 aaPredicted RBP21.18■□□□□ 0.98
GTF3C5-207ENST00000440319 IGF1RP08069 1367 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms