RNA–Protein interactions for RNA: ENST00000440081.2

TNRC18-207, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-207ENST00000440081 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
TNRC18-207ENST00000440081 ABCC9O60706 1549 aa25.59■■□□□ 1.69
TNRC18-207ENST00000440081 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
TNRC18-207ENST00000440081 RB1CC1Q8TDY2 1594 aa24.28■■□□□ 1.48
TNRC18-207ENST00000440081 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
TNRC18-207ENST00000440081 NACADO15069 1562 aa24.07■■□□□ 1.44
TNRC18-207ENST00000440081 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
TNRC18-207ENST00000440081 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
TNRC18-207ENST00000440081 UNC13AQ9UPW8 1703 aa23.74■■□□□ 1.39
TNRC18-207ENST00000440081 MYO15BQ96JP2 1530 aa23.68■■□□□ 1.38
TNRC18-207ENST00000440081 BICRAQ9NZM4 1560 aa23.59■■□□□ 1.37
TNRC18-207ENST00000440081 ZCCHC6Q5VYS8 1495 aaKnown RBP23.34■■□□□ 1.33
TNRC18-207ENST00000440081 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
TNRC18-207ENST00000440081 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
TNRC18-207ENST00000440081 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
TNRC18-207ENST00000440081 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
TNRC18-207ENST00000440081 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.29
TNRC18-207ENST00000440081 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
TNRC18-207ENST00000440081 DNAJC5Q9H3Z4 198 aa22.35■■□□□ 1.17
TNRC18-207ENST00000440081 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
TNRC18-207ENST00000440081 CUX2O14529 1486 aa22.15■■□□□ 1.14
TNRC18-207ENST00000440081 ATAD2BQ9ULI0 1458 aa22.12■■□□□ 1.13
TNRC18-207ENST00000440081 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
TNRC18-207ENST00000440081 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
TNRC18-207ENST00000440081 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
TNRC18-207ENST00000440081 HMGXB3Q12766 1538 aa22.04■■□□□ 1.12
TNRC18-207ENST00000440081 NESP48681 1621 aa21.93■■□□□ 1.1
TNRC18-207ENST00000440081 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
TNRC18-207ENST00000440081 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
TNRC18-207ENST00000440081 PEG3Q9GZU2 1588 aa21.84■■□□□ 1.09
TNRC18-207ENST00000440081 THOC2Q8NI27 1593 aaKnown RBP21.76■■□□□ 1.07
TNRC18-207ENST00000440081 LAMC3Q9Y6N6 1575 aa21.75■■□□□ 1.07
TNRC18-207ENST00000440081 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
TNRC18-207ENST00000440081 KIF21AQ7Z4S6 1674 aa21.65■■□□□ 1.06
TNRC18-207ENST00000440081 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
TNRC18-207ENST00000440081 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
TNRC18-207ENST00000440081 WIZO95785 1651 aa21.47■■□□□ 1.03
TNRC18-207ENST00000440081 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
TNRC18-207ENST00000440081 WDR62O43379 1518 aa21.42■■□□□ 1.02
TNRC18-207ENST00000440081 CEP164Q9UPV0 1460 aa21.33■■□□□ 1.01
TNRC18-207ENST00000440081 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
TNRC18-207ENST00000440081 TRIM41Q8WV44 630 aa21.28■■□□□ 1
TNRC18-207ENST00000440081 CFTRP13569 1480 aa21.25■□□□□ 0.99
TNRC18-207ENST00000440081 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
TNRC18-207ENST00000440081 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
TNRC18-207ENST00000440081 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
TNRC18-207ENST00000440081 OSCARQ8IYS5 282 aa21.08■□□□□ 0.97
TNRC18-207ENST00000440081 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
TNRC18-207ENST00000440081 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
TNRC18-207ENST00000440081 IFT140Q96RY7 1462 aa20.91■□□□□ 0.94
TNRC18-207ENST00000440081 ZNF608Q9ULD9 1512 aaPredicted RBP20.9■□□□□ 0.94
TNRC18-207ENST00000440081 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
TNRC18-207ENST00000440081 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
TNRC18-207ENST00000440081 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
TNRC18-207ENST00000440081 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
TNRC18-207ENST00000440081 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
TNRC18-207ENST00000440081 EIF4G3O43432 1585 aaKnown RBP20.78■□□□□ 0.92
TNRC18-207ENST00000440081 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
TNRC18-207ENST00000440081 ARHGEF11O15085 1522 aa20.77■□□□□ 0.92
TNRC18-207ENST00000440081 TARBP1Q13395 1621 aaKnown RBP20.7■□□□□ 0.9
TNRC18-207ENST00000440081 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.91e-6■■■■■ 29.5
TNRC18-207ENST00000440081 CHD1O14646 1710 aa20.67■□□□□ 0.9
TNRC18-207ENST00000440081 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
TNRC18-207ENST00000440081 CYB5RLQ6IPT4 315 aa20.6■□□□□ 0.89
TNRC18-207ENST00000440081 FBLN2P98095 1184 aa20.57■□□□□ 0.88
TNRC18-207ENST00000440081 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
TNRC18-207ENST00000440081 ARAP1Q96P48 1450 aa20.55■□□□□ 0.88
TNRC18-207ENST00000440081 SOGA1O94964 1423 aa20.53■□□□□ 0.88
TNRC18-207ENST00000440081 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
TNRC18-207ENST00000440081 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
TNRC18-207ENST00000440081 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
TNRC18-207ENST00000440081 SNAPC4Q5SXM2 1469 aa20.47■□□□□ 0.87
TNRC18-207ENST00000440081 TRHP20396 242 aaPredicted RBP20.44■□□□□ 0.86
TNRC18-207ENST00000440081 CUX1P39880 1505 aa20.43■□□□□ 0.86
TNRC18-207ENST00000440081 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
TNRC18-207ENST00000440081 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
TNRC18-207ENST00000440081 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
TNRC18-207ENST00000440081 CHMP7Q8WUX9 453 aaPredicted RBP20.39■□□□□ 0.85
TNRC18-207ENST00000440081 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
TNRC18-207ENST00000440081 SYNJ2O15056 1496 aa20.35■□□□□ 0.85
TNRC18-207ENST00000440081 PBRM1Q86U86 1689 aa20.3■□□□□ 0.84
TNRC18-207ENST00000440081 GAPVD1Q14C86 1478 aa20.29■□□□□ 0.84
TNRC18-207ENST00000440081 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
TNRC18-207ENST00000440081 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
TNRC18-207ENST00000440081 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
TNRC18-207ENST00000440081 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
TNRC18-207ENST00000440081 ADAMTS12P58397 1594 aa20.1■□□□□ 0.81
TNRC18-207ENST00000440081 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
TNRC18-207ENST00000440081 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
TNRC18-207ENST00000440081 NUP160Q12769 1436 aa20.07■□□□□ 0.8
TNRC18-207ENST00000440081 CEP170Q5SW79 1584 aa20.07■□□□□ 0.8
TNRC18-207ENST00000440081 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
TNRC18-207ENST00000440081 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
TNRC18-207ENST00000440081 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
TNRC18-207ENST00000440081 SHROOM2Q13796 1616 aa20.01■□□□□ 0.79
TNRC18-207ENST00000440081 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
TNRC18-207ENST00000440081 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
TNRC18-207ENST00000440081 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
TNRC18-207ENST00000440081 KIF13AQ9H1H9 1805 aa19.85■□□□□ 0.77
TNRC18-207ENST00000440081 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms