RNA–Protein interactions for RNA: ENST00000440064.2

RSF1-202, Transcript of remodeling and spacing factor 1, humanhuman

TSL 5

Gene RSF1, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-202ENST00000440064 NISCHQ9Y2I1 1504 aa50.76■■■■■ 5.72
RSF1-202ENST00000440064 ABCC9O60706 1549 aa45.79■■■■■ 4.92
RSF1-202ENST00000440064 CCDC180Q9P1Z9 1646 aa45.57■■■■■ 4.89
RSF1-202ENST00000440064 RB1CC1Q8TDY2 1594 aa43.46■■■■■ 4.55
RSF1-202ENST00000440064 DNAJC5BQ9UF47 199 aa43.28■■■■■ 4.52
RSF1-202ENST00000440064 NACADO15069 1562 aa43.15■■■■■ 4.5
RSF1-202ENST00000440064 DCAF8L2P0C7V8 631 aa42.87■■■■■ 4.45
RSF1-202ENST00000440064 PABPN1Q86U42 306 aaKnown RBP eCLIP42.65■■■■■ 4.42
RSF1-202ENST00000440064 UNC13AQ9UPW8 1703 aa42.57■■■■■ 4.4
RSF1-202ENST00000440064 MYO15BQ96JP2 1530 aa42.52■■■■■ 4.4
RSF1-202ENST00000440064 BICRAQ9NZM4 1560 aa42.32■■■■■ 4.37
RSF1-202ENST00000440064 ZCCHC6Q5VYS8 1495 aaKnown RBP42.01■■■■■ 4.32
RSF1-202ENST00000440064 DCAF1Q9Y4B6 1507 aa41.91■■■■■ 4.3
RSF1-202ENST00000440064 SHROOM4Q9ULL8 1493 aa41.61■■■■■ 4.25
RSF1-202ENST00000440064 SCRIBQ14160 1630 aa41.51■■■■■ 4.24
RSF1-202ENST00000440064 CC2D2AQ9P2K1 1620 aa41.36■■■■■ 4.21
RSF1-202ENST00000440064 CECR2Q9BXF3 1484 aa41.26■■■■■ 4.2
RSF1-202ENST00000440064 EIF4G1Q04637 1599 aaKnown RBP41.23■■■■■ 4.19
RSF1-202ENST00000440064 NCAPD3P42695 1498 aa39.89■■■■□ 3.98
RSF1-202ENST00000440064 DNAJC5Q9H3Z4 198 aa39.8■■■■□ 3.96
RSF1-202ENST00000440064 ATAD2BQ9ULI0 1458 aa39.73■■■■□ 3.95
RSF1-202ENST00000440064 SMARCA4P51532 1647 aa39.62■■■■□ 3.93
RSF1-202ENST00000440064 SMARCA2P51531 1590 aa39.55■■■■□ 3.92
RSF1-202ENST00000440064 HMGXB3Q12766 1538 aa39.51■■■■□ 3.92
RSF1-202ENST00000440064 CUX2O14529 1486 aa39.51■■■■□ 3.92
RSF1-202ENST00000440064 ERCC6Q03468 1493 aa39.48■■■■□ 3.91
RSF1-202ENST00000440064 BAZ1AQ9NRL2 1556 aaPredicted RBP39.36■■■■□ 3.89
RSF1-202ENST00000440064 NESP48681 1621 aa39.33■■■■□ 3.89
RSF1-202ENST00000440064 BAZ1BQ9UIG0 1483 aaKnown RBP39.27■■■■□ 3.88
RSF1-202ENST00000440064 PEG3Q9GZU2 1588 aa39.26■■■■□ 3.88
RSF1-202ENST00000440064 MROH2BQ7Z745 1585 aa39.14■■■■□ 3.86
RSF1-202ENST00000440064 LAMC3Q9Y6N6 1575 aa38.95■■■■□ 3.83
RSF1-202ENST00000440064 THOC2Q8NI27 1593 aaKnown RBP38.93■■■■□ 3.82
RSF1-202ENST00000440064 KIF21AQ7Z4S6 1674 aa38.78■■■■□ 3.8
RSF1-202ENST00000440064 PDS5BQ9NTI5 1447 aa38.72■■■■□ 3.79
RSF1-202ENST00000440064 CADPSQ9ULU8 1353 aa38.65■■■■□ 3.78
RSF1-202ENST00000440064 WIZO95785 1651 aa38.64■■■■□ 3.78
RSF1-202ENST00000440064 MRC2Q9UBG0 1479 aa38.41■■■■□ 3.74
RSF1-202ENST00000440064 WDR62O43379 1518 aa38.35■■■■□ 3.73
RSF1-202ENST00000440064 RSF1Q96T23 1441 aaPredicted RBP38.27■■■■□ 3.72
RSF1-202ENST00000440064 CEP164Q9UPV0 1460 aa38.21■■■■□ 3.71
RSF1-202ENST00000440064 CFTRP13569 1480 aa38.18■■■■□ 3.7
RSF1-202ENST00000440064 FANCD2Q9BXW9 1451 aa38.18■■■■□ 3.7
RSF1-202ENST00000440064 TOP2AP11388 1531 aaKnown RBP38.09■■■■□ 3.69
RSF1-202ENST00000440064 URB2Q14146 1524 aaKnown RBP37.92■■■■□ 3.66
RSF1-202ENST00000440064 TRIM41Q8WV44 630 aa37.88■■■■□ 3.65
RSF1-202ENST00000440064 OSCARQ8IYS5 282 aa37.72■■■■□ 3.63
RSF1-202ENST00000440064 PRDM2Q13029 1718 aa37.72■■■■□ 3.63
RSF1-202ENST00000440064 CCDC88BA6NC98 1476 aa37.71■■■■□ 3.63
RSF1-202ENST00000440064 ZNF608Q9ULD9 1512 aaPredicted RBP37.5■■■■□ 3.59
RSF1-202ENST00000440064 IFT140Q96RY7 1462 aa37.47■■■■□ 3.59
RSF1-202ENST00000440064 TOPBP1Q92547 1522 aa37.46■■■■□ 3.59
RSF1-202ENST00000440064 ABCC8Q09428 1581 aa37.32■■■■□ 3.56
RSF1-202ENST00000440064 DNMBPQ6XZF7 1577 aa37.27■■■■□ 3.56
RSF1-202ENST00000440064 RIMBP3CA6NJZ7 1639 aa37.24■■■■□ 3.55
RSF1-202ENST00000440064 RIMBP3BA6NNM3 1639 aa37.24■■■■□ 3.55
RSF1-202ENST00000440064 RIMBP3Q9UFD9 1639 aa37.24■■■■□ 3.55
RSF1-202ENST00000440064 EIF4G3O43432 1585 aaKnown RBP37.21■■■■□ 3.55
RSF1-202ENST00000440064 TARBP1Q13395 1621 aaKnown RBP37.17■■■■□ 3.54
RSF1-202ENST00000440064 AQRO60306 1485 aaKnown RBP eCLIP37.13■■■■□ 3.536e-8■■■■■ 31.2
RSF1-202ENST00000440064 ARHGEF11O15085 1522 aa37.1■■■■□ 3.53
RSF1-202ENST00000440064 POLA1P09884 1462 aaPredicted RBP37.07■■■■□ 3.52
RSF1-202ENST00000440064 CHD1O14646 1710 aa36.99■■■■□ 3.51
RSF1-202ENST00000440064 RAD54L2Q9Y4B4 1467 aa36.95■■■■□ 3.51
RSF1-202ENST00000440064 SOGA1O94964 1423 aa36.88■■■■□ 3.49
RSF1-202ENST00000440064 TDRD9Q8NDG6 1382 aaKnown RBP36.87■■■■□ 3.49
RSF1-202ENST00000440064 CYB5RLQ6IPT4 315 aa36.86■■■■□ 3.49
RSF1-202ENST00000440064 FBLN2P98095 1184 aa36.85■■■■□ 3.49
RSF1-202ENST00000440064 FGD5Q6ZNL6 1462 aa36.79■■■■□ 3.48
RSF1-202ENST00000440064 CUX1P39880 1505 aa36.76■■■■□ 3.48
RSF1-202ENST00000440064 ARAP1Q96P48 1450 aa36.74■■■■□ 3.47
RSF1-202ENST00000440064 WDR97A6NE52 1622 aa36.69■■■■□ 3.46
RSF1-202ENST00000440064 SNAPC4Q5SXM2 1469 aa36.69■■■■□ 3.46
RSF1-202ENST00000440064 CLASP1Q7Z460 1538 aa36.59■■■■□ 3.45
RSF1-202ENST00000440064 MAGI1Q96QZ7 1491 aaPredicted RBP36.58■■■■□ 3.45
RSF1-202ENST00000440064 GRIN2BQ13224 1484 aa36.56■■■■□ 3.44
RSF1-202ENST00000440064 CHMP7Q8WUX9 453 aaPredicted RBP36.56■■■■□ 3.44
RSF1-202ENST00000440064 SYNJ2O15056 1496 aa36.47■■■■□ 3.43
RSF1-202ENST00000440064 SYNJ1O43426 1573 aa36.47■■■■□ 3.43
RSF1-202ENST00000440064 TRHP20396 242 aaPredicted RBP36.44■■■■□ 3.42
RSF1-202ENST00000440064 GAPVD1Q14C86 1478 aa36.43■■■■□ 3.42
RSF1-202ENST00000440064 PBRM1Q86U86 1689 aa36.39■■■■□ 3.42
RSF1-202ENST00000440064 ABCA10Q8WWZ4 1543 aa36.38■■■■□ 3.41
RSF1-202ENST00000440064 SUPT5HO00267 1087 aaKnown RBP36.37■■■■□ 3.41
RSF1-202ENST00000440064 ABCA5Q8WWZ7 1642 aa36.33■■■■□ 3.41
RSF1-202ENST00000440064 WRNQ14191 1432 aaPredicted RBP eCLIP36.16■■■■□ 3.38
RSF1-202ENST00000440064 GRIN2AQ12879 1464 aa36.11■■■■□ 3.37
RSF1-202ENST00000440064 TOP2BQ02880 1626 aa36.09■■■■□ 3.37
RSF1-202ENST00000440064 BIVM-ERCC5R4GMW8 1640 aa36.09■■■■□ 3.37
RSF1-202ENST00000440064 ADAMTS12P58397 1594 aa36.05■■■■□ 3.36
RSF1-202ENST00000440064 ERCC6L2Q5T890 1561 aa36.04■■■■□ 3.36
RSF1-202ENST00000440064 NUP160Q12769 1436 aa36.02■■■■□ 3.36
RSF1-202ENST00000440064 CEP170Q5SW79 1584 aa36.01■■■■□ 3.35
RSF1-202ENST00000440064 FHAD1B1AJZ9 1412 aa35.95■■■■□ 3.35
RSF1-202ENST00000440064 ERICH3Q5RHP9 1530 aa35.89■■■■□ 3.34
RSF1-202ENST00000440064 SHROOM2Q13796 1616 aa35.88■■■■□ 3.33
RSF1-202ENST00000440064 PRG4Q92954 1404 aaPredicted RBP35.66■■■■□ 3.3
RSF1-202ENST00000440064 JPH4Q96JJ6 628 aa35.66■■■■□ 3.3
RSF1-202ENST00000440064 RUSC2Q8N2Y8 1516 aa35.54■■■■□ 3.28
RSF1-202ENST00000440064 KIF13AQ9H1H9 1805 aa35.51■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms