RNA–Protein interactions for RNA: ENST00000439680.5

APOL1-211, Transcript of apolipoprotein L1, humanhuman

TSL 4

Gene APOL1, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-211ENST00000439680 NISCHQ9Y2I1 1504 aa29.92■■■□□ 2.38
APOL1-211ENST00000439680 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
APOL1-211ENST00000439680 ABCC9O60706 1549 aa26.3■■□□□ 1.8
APOL1-211ENST00000439680 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
APOL1-211ENST00000439680 RB1CC1Q8TDY2 1594 aa25.17■■□□□ 1.62
APOL1-211ENST00000439680 NACADO15069 1562 aa25.1■■□□□ 1.61
APOL1-211ENST00000439680 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
APOL1-211ENST00000439680 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
APOL1-211ENST00000439680 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
APOL1-211ENST00000439680 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
APOL1-211ENST00000439680 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
APOL1-211ENST00000439680 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
APOL1-211ENST00000439680 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
APOL1-211ENST00000439680 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
APOL1-211ENST00000439680 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
APOL1-211ENST00000439680 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
APOL1-211ENST00000439680 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
APOL1-211ENST00000439680 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.38
APOL1-211ENST00000439680 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
APOL1-211ENST00000439680 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
APOL1-211ENST00000439680 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
APOL1-211ENST00000439680 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
APOL1-211ENST00000439680 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
APOL1-211ENST00000439680 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
APOL1-211ENST00000439680 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
APOL1-211ENST00000439680 BAZ1BQ9UIG0 1483 aaKnown RBP22.99■■□□□ 1.27
APOL1-211ENST00000439680 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
APOL1-211ENST00000439680 WIZO95785 1651 aa22.81■■□□□ 1.24
APOL1-211ENST00000439680 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
APOL1-211ENST00000439680 NESP48681 1621 aa22.71■■□□□ 1.23
APOL1-211ENST00000439680 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
APOL1-211ENST00000439680 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
APOL1-211ENST00000439680 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
APOL1-211ENST00000439680 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
APOL1-211ENST00000439680 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
APOL1-211ENST00000439680 CUX2O14529 1486 aa22.45■■□□□ 1.18
APOL1-211ENST00000439680 KIF21AQ7Z4S6 1674 aa22.39■■□□□ 1.17
APOL1-211ENST00000439680 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
APOL1-211ENST00000439680 CFTRP13569 1480 aa22.33■■□□□ 1.16
APOL1-211ENST00000439680 CCDC88BA6NC98 1476 aa22.31■■□□□ 1.16
APOL1-211ENST00000439680 FANCD2Q9BXW9 1451 aa22.26■■□□□ 1.15
APOL1-211ENST00000439680 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
APOL1-211ENST00000439680 CEP164Q9UPV0 1460 aa22.24■■□□□ 1.15
APOL1-211ENST00000439680 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
APOL1-211ENST00000439680 WDR62O43379 1518 aa22.15■■□□□ 1.14
APOL1-211ENST00000439680 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
APOL1-211ENST00000439680 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
APOL1-211ENST00000439680 DNAJC5Q9H3Z4 198 aa21.99■■□□□ 1.11
APOL1-211ENST00000439680 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
APOL1-211ENST00000439680 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
APOL1-211ENST00000439680 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
APOL1-211ENST00000439680 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
APOL1-211ENST00000439680 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
APOL1-211ENST00000439680 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
APOL1-211ENST00000439680 CUX1P39880 1505 aa21.65■■□□□ 1.06
APOL1-211ENST00000439680 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
APOL1-211ENST00000439680 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
APOL1-211ENST00000439680 SOGA1O94964 1423 aa21.62■■□□□ 1.05
APOL1-211ENST00000439680 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
APOL1-211ENST00000439680 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.053e-6■■■□□ 17
APOL1-211ENST00000439680 EIF4G3O43432 1585 aaKnown RBP21.58■■□□□ 1.05
APOL1-211ENST00000439680 OSCARQ8IYS5 282 aa21.55■■□□□ 1.04
APOL1-211ENST00000439680 TDRD9Q8NDG6 1382 aaKnown RBP21.53■■□□□ 1.04
APOL1-211ENST00000439680 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.03
APOL1-211ENST00000439680 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
APOL1-211ENST00000439680 SYNJ1O43426 1573 aa21.41■■□□□ 1.02
APOL1-211ENST00000439680 FBLN2P98095 1184 aa21.41■■□□□ 1.02
APOL1-211ENST00000439680 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
APOL1-211ENST00000439680 BIVM-ERCC5R4GMW8 1640 aa21.38■■□□□ 1.01
APOL1-211ENST00000439680 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
APOL1-211ENST00000439680 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
APOL1-211ENST00000439680 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
APOL1-211ENST00000439680 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
APOL1-211ENST00000439680 CHD1O14646 1710 aa21.33■■□□□ 1.01
APOL1-211ENST00000439680 MAGI1Q96QZ7 1491 aaPredicted RBP21.31■■□□□ 1
APOL1-211ENST00000439680 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
APOL1-211ENST00000439680 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
APOL1-211ENST00000439680 TRIM41Q8WV44 630 aa21.27■■□□□ 1
APOL1-211ENST00000439680 PBRM1Q86U86 1689 aa21.27■■□□□ 1
APOL1-211ENST00000439680 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
APOL1-211ENST00000439680 RIMBP3CA6NJZ7 1639 aa21.18■□□□□ 0.98
APOL1-211ENST00000439680 RIMBP3BA6NNM3 1639 aa21.18■□□□□ 0.98
APOL1-211ENST00000439680 RIMBP3Q9UFD9 1639 aa21.18■□□□□ 0.98
APOL1-211ENST00000439680 ARHGEF11O15085 1522 aa21.16■□□□□ 0.98
APOL1-211ENST00000439680 ADAMTS12P58397 1594 aa21.11■□□□□ 0.97
APOL1-211ENST00000439680 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
APOL1-211ENST00000439680 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
APOL1-211ENST00000439680 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
APOL1-211ENST00000439680 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
APOL1-211ENST00000439680 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
APOL1-211ENST00000439680 CYB5RLQ6IPT4 315 aa21.04■□□□□ 0.96
APOL1-211ENST00000439680 NUP160Q12769 1436 aa20.99■□□□□ 0.95
APOL1-211ENST00000439680 ARAP1Q96P48 1450 aa20.99■□□□□ 0.95
APOL1-211ENST00000439680 IGF1RP08069 1367 aa20.97■□□□□ 0.95
APOL1-211ENST00000439680 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
APOL1-211ENST00000439680 CUL7Q14999 1698 aa20.87■□□□□ 0.93
APOL1-211ENST00000439680 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
APOL1-211ENST00000439680 ERCC6L2Q5T890 1561 aa20.84■□□□□ 0.93
APOL1-211ENST00000439680 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
APOL1-211ENST00000439680 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms