RNA–Protein interactions for RNA: ENST00000439602.6

RPS18-230, Transcript of ribosomal protein S18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS18, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS18-230ENST00000439602 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
RPS18-230ENST00000439602 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.77
RPS18-230ENST00000439602 ABCC9O60706 1549 aa25.68■■□□□ 1.7
RPS18-230ENST00000439602 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
RPS18-230ENST00000439602 NACADO15069 1562 aa24.54■■□□□ 1.52
RPS18-230ENST00000439602 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
RPS18-230ENST00000439602 MYO15BQ96JP2 1530 aa24.28■■□□□ 1.48
RPS18-230ENST00000439602 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
RPS18-230ENST00000439602 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
RPS18-230ENST00000439602 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
RPS18-230ENST00000439602 PABPN1Q86U42 306 aaKnown RBP eCLIP23.86■■□□□ 1.41
RPS18-230ENST00000439602 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
RPS18-230ENST00000439602 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
RPS18-230ENST00000439602 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
RPS18-230ENST00000439602 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
RPS18-230ENST00000439602 EIF4G1Q04637 1599 aaKnown RBP23.29■■□□□ 1.32
RPS18-230ENST00000439602 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
RPS18-230ENST00000439602 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
RPS18-230ENST00000439602 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
RPS18-230ENST00000439602 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
RPS18-230ENST00000439602 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
RPS18-230ENST00000439602 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
RPS18-230ENST00000439602 ATAD2BQ9ULI0 1458 aa22.53■■□□□ 1.2
RPS18-230ENST00000439602 HMGXB3Q12766 1538 aa22.51■■□□□ 1.19
RPS18-230ENST00000439602 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
RPS18-230ENST00000439602 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
RPS18-230ENST00000439602 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
RPS18-230ENST00000439602 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
RPS18-230ENST00000439602 CUX2O14529 1486 aa22.14■■□□□ 1.13
RPS18-230ENST00000439602 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
RPS18-230ENST00000439602 NESP48681 1621 aa22.11■■□□□ 1.13
RPS18-230ENST00000439602 WIZO95785 1651 aa22.11■■□□□ 1.13
RPS18-230ENST00000439602 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.1
RPS18-230ENST00000439602 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
RPS18-230ENST00000439602 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
RPS18-230ENST00000439602 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
RPS18-230ENST00000439602 CADPSQ9ULU8 1353 aa21.88■■□□□ 1.09
RPS18-230ENST00000439602 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
RPS18-230ENST00000439602 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
RPS18-230ENST00000439602 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
RPS18-230ENST00000439602 CFTRP13569 1480 aa21.71■■□□□ 1.07
RPS18-230ENST00000439602 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
RPS18-230ENST00000439602 WDR62O43379 1518 aa21.69■■□□□ 1.06
RPS18-230ENST00000439602 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
RPS18-230ENST00000439602 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
RPS18-230ENST00000439602 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
RPS18-230ENST00000439602 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
RPS18-230ENST00000439602 ABCC8Q09428 1581 aa21.31■■□□□ 1
RPS18-230ENST00000439602 TOPBP1Q92547 1522 aa21.28■■□□□ 1
RPS18-230ENST00000439602 DNMBPQ6XZF7 1577 aa21.27■□□□□ 0.99
RPS18-230ENST00000439602 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
RPS18-230ENST00000439602 EIF4G3O43432 1585 aaKnown RBP21.12■□□□□ 0.97
RPS18-230ENST00000439602 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
RPS18-230ENST00000439602 TARBP1Q13395 1621 aaKnown RBP21.1■□□□□ 0.97
RPS18-230ENST00000439602 OSCARQ8IYS5 282 aa21.08■□□□□ 0.97
RPS18-230ENST00000439602 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
RPS18-230ENST00000439602 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
RPS18-230ENST00000439602 WDR97A6NE52 1622 aa21■□□□□ 0.95
RPS18-230ENST00000439602 FGD5Q6ZNL6 1462 aa20.97■□□□□ 0.95
RPS18-230ENST00000439602 CUX1P39880 1505 aa20.97■□□□□ 0.95
RPS18-230ENST00000439602 SOGA1O94964 1423 aa20.95■□□□□ 0.95
RPS18-230ENST00000439602 CHD1O14646 1710 aa20.95■□□□□ 0.94
RPS18-230ENST00000439602 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.943e-21■■■■■ 65.8
RPS18-230ENST00000439602 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
RPS18-230ENST00000439602 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
RPS18-230ENST00000439602 RIMBP3CA6NJZ7 1639 aa20.85■□□□□ 0.93
RPS18-230ENST00000439602 RIMBP3BA6NNM3 1639 aa20.85■□□□□ 0.93
RPS18-230ENST00000439602 RIMBP3Q9UFD9 1639 aa20.85■□□□□ 0.93
RPS18-230ENST00000439602 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
RPS18-230ENST00000439602 PBRM1Q86U86 1689 aa20.81■□□□□ 0.92
RPS18-230ENST00000439602 MAGI1Q96QZ7 1491 aaPredicted RBP20.8■□□□□ 0.92
RPS18-230ENST00000439602 GRIN2BQ13224 1484 aa20.79■□□□□ 0.92
RPS18-230ENST00000439602 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
RPS18-230ENST00000439602 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
RPS18-230ENST00000439602 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
RPS18-230ENST00000439602 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
RPS18-230ENST00000439602 FBLN2P98095 1184 aa20.76■□□□□ 0.91
RPS18-230ENST00000439602 ABCA10Q8WWZ4 1543 aa20.76■□□□□ 0.91
RPS18-230ENST00000439602 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
RPS18-230ENST00000439602 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
RPS18-230ENST00000439602 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
RPS18-230ENST00000439602 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.915e-25■□□□□ 8.1
RPS18-230ENST00000439602 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
RPS18-230ENST00000439602 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
RPS18-230ENST00000439602 CLASP1Q7Z460 1538 aa20.67■□□□□ 0.9
RPS18-230ENST00000439602 ADAMTS12P58397 1594 aa20.57■□□□□ 0.88
RPS18-230ENST00000439602 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
RPS18-230ENST00000439602 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
RPS18-230ENST00000439602 CYB5RLQ6IPT4 315 aa20.53■□□□□ 0.88
RPS18-230ENST00000439602 GRIN2AQ12879 1464 aa20.52■□□□□ 0.88
RPS18-230ENST00000439602 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
RPS18-230ENST00000439602 CEP170Q5SW79 1584 aa20.44■□□□□ 0.86
RPS18-230ENST00000439602 NUP160Q12769 1436 aa20.43■□□□□ 0.86
RPS18-230ENST00000439602 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
RPS18-230ENST00000439602 CUL7Q14999 1698 aa20.34■□□□□ 0.85
RPS18-230ENST00000439602 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
RPS18-230ENST00000439602 RUSC2Q8N2Y8 1516 aa20.29■□□□□ 0.84
RPS18-230ENST00000439602 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
RPS18-230ENST00000439602 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
RPS18-230ENST00000439602 IGF1RP08069 1367 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms